RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 H3BNG1 76 aa3.82□□□□□ -1.8
TUBE1-207ENST00000604689 SPRR1BP22528 89 aa3.81□□□□□ -1.8
TUBE1-207ENST00000604689 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
TUBE1-207ENST00000604689 PKD1P98161 4303 aa3.77□□□□□ -1.81
TUBE1-207ENST00000604689 J3QKU1 62 aa3.77□□□□□ -1.81
TUBE1-207ENST00000604689 KRTAP13-1Q8IUC0 172 aa3.75□□□□□ -1.81
TUBE1-207ENST00000604689 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
TUBE1-207ENST00000604689 LCE5AQ5TCM9 118 aa3.71□□□□□ -1.81
TUBE1-207ENST00000604689 HSPG2P98160 4391 aa3.7□□□□□ -1.82
TUBE1-207ENST00000604689 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
TUBE1-207ENST00000604689 DNAH11Q96DT5 4516 aa3.7□□□□□ -1.82
TUBE1-207ENST00000604689 PLECQ15149 4684 aaKnown RBP3.7□□□□□ -1.82
TUBE1-207ENST00000604689 KRTAP10-8P60410 259 aa3.69□□□□□ -1.82
TUBE1-207ENST00000604689 XP32Q5T750 250 aa3.69□□□□□ -1.82
TUBE1-207ENST00000604689 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
TUBE1-207ENST00000604689 Q6ZRN7 208 aaPredicted RBP3.69□□□□□ -1.82
TUBE1-207ENST00000604689 SACSQ9NZJ4 4579 aa3.68□□□□□ -1.82
TUBE1-207ENST00000604689 COX6B2Q6YFQ2 88 aa3.66□□□□□ -1.82
TUBE1-207ENST00000604689 DYNC1H1Q14204 4646 aaKnown RBP3.65□□□□□ -1.82
TUBE1-207ENST00000604689 FAT1Q14517 4588 aa3.63□□□□□ -1.83
TUBE1-207ENST00000604689 INE1O15225 51 aa3.62□□□□□ -1.83
TUBE1-207ENST00000604689 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
TUBE1-207ENST00000604689 KRTAP9-7A8MTY7 169 aa3.61□□□□□ -1.83
TUBE1-207ENST00000604689 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
TUBE1-207ENST00000604689 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
TUBE1-207ENST00000604689 STARD9Q9P2P6 4700 aa3.59□□□□□ -1.84
TUBE1-207ENST00000604689 KRTAP13-2Q52LG2 175 aa3.58□□□□□ -1.84
TUBE1-207ENST00000604689 S4R3F8 94 aa3.58□□□□□ -1.84
TUBE1-207ENST00000604689 LRP1BQ9NZR2 4599 aa3.57□□□□□ -1.84
TUBE1-207ENST00000604689 C9orf92A6NGG3 77 aa3.57□□□□□ -1.84
TUBE1-207ENST00000604689 RYR2Q92736 4967 aa3.55□□□□□ -1.84
TUBE1-207ENST00000604689 MUC17Q685J3 4493 aa3.55□□□□□ -1.84
TUBE1-207ENST00000604689 KRTAP13-4Q3LI77 160 aa3.52□□□□□ -1.85
TUBE1-207ENST00000604689 APOBP04114 4563 aaKnown RBP3.51□□□□□ -1.85
TUBE1-207ENST00000604689 DNHD1Q96M86 4753 aa3.5□□□□□ -1.85
TUBE1-207ENST00000604689 BIRC6Q9NR09 4857 aa3.48□□□□□ -1.85
TUBE1-207ENST00000604689 DNAH5Q8TE73 4624 aa3.47□□□□□ -1.85
TUBE1-207ENST00000604689 RYR3Q15413 4870 aa3.47□□□□□ -1.85
TUBE1-207ENST00000604689 KRTAP1-4P0C5Y4 121 aa3.43□□□□□ -1.86
TUBE1-207ENST00000604689 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
TUBE1-207ENST00000604689 RYR1P21817 5038 aa3.41□□□□□ -1.86
TUBE1-207ENST00000604689 MYCBP2O75592 4640 aa3.41□□□□□ -1.86
TUBE1-207ENST00000604689 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
TUBE1-207ENST00000604689 LCE1FQ5T754 118 aa3.4□□□□□ -1.86
TUBE1-207ENST00000604689 KRTAP10-1P60331 282 aa3.39□□□□□ -1.87
TUBE1-207ENST00000604689 HYDINQ4G0P3 5121 aa3.38□□□□□ -1.87
TUBE1-207ENST00000604689 KRTAP19-1Q8IUB9 90 aa3.38□□□□□ -1.87
TUBE1-207ENST00000604689 SMR3BP02814 79 aaPredicted RBP3.37□□□□□ -1.87
TUBE1-207ENST00000604689 HERC2O95714 4834 aa3.32□□□□□ -1.88
TUBE1-207ENST00000604689 FLGP20930 4061 aaPredicted RBP3.32□□□□□ -1.88
TUBE1-207ENST00000604689 LRP1Q07954 4544 aaKnown RBP3.31□□□□□ -1.88
TUBE1-207ENST00000604689 LPAP08519 4548 aa3.3□□□□□ -1.88
TUBE1-207ENST00000604689 KMT2CQ8NEZ4 4911 aaKnown RBP3.29□□□□□ -1.88
TUBE1-207ENST00000604689 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
TUBE1-207ENST00000604689 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
TUBE1-207ENST00000604689 KRTAP17-1Q9BYP8 105 aa3.29□□□□□ -1.88
TUBE1-207ENST00000604689 KRTAP4-8Q9BYQ9 185 aa3.28□□□□□ -1.88
TUBE1-207ENST00000604689 KRTAP9-3Q9BYQ3 159 aa3.26□□□□□ -1.89
TUBE1-207ENST00000604689 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
TUBE1-207ENST00000604689 LCE1AQ5T7P2 110 aa3.19□□□□□ -1.9
TUBE1-207ENST00000604689 KRTAP9-2Q9BYQ4 174 aa3.18□□□□□ -1.9
TUBE1-207ENST00000604689 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
TUBE1-207ENST00000604689 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.17□□□□□ -1.9
TUBE1-207ENST00000604689 LRP2P98164 4655 aa3.16□□□□□ -1.9
TUBE1-207ENST00000604689 M0QZ58 72 aa3.15□□□□□ -1.91
TUBE1-207ENST00000604689 A0A1B0GVY2 172 aa3.12□□□□□ -1.91
TUBE1-207ENST00000604689 PCLOQ9Y6V0 5065 aa3.12□□□□□ -1.91
TUBE1-207ENST00000604689 KRTAP4-8A0A0G2JLE6 195 aa3.12□□□□□ -1.91
TUBE1-207ENST00000604689 KRTAP4-7Q9BYR0 210 aa3.11□□□□□ -1.91
TUBE1-207ENST00000604689 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
TUBE1-207ENST00000604689 RPS29P62273 56 aaKnown RBP3.1□□□□□ -1.91
TUBE1-207ENST00000604689 ABCA13Q86UQ4 5058 aa3.07□□□□□ -1.92
TUBE1-207ENST00000604689 KRTAP10-4P60372 401 aaPredicted RBP3.06□□□□□ -1.92
TUBE1-207ENST00000604689 MT3P25713 68 aa3.05□□□□□ -1.92
TUBE1-207ENST00000604689 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
TUBE1-207ENST00000604689 KIAA1109Q2LD37 5005 aa3.05□□□□□ -1.92
TUBE1-207ENST00000604689 Q5VSD8 79 aa3.04□□□□□ -1.92
TUBE1-207ENST00000604689 HERC1Q15751 4861 aa3.02□□□□□ -1.93
TUBE1-207ENST00000604689 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
TUBE1-207ENST00000604689 EPPK1P58107 5090 aaKnown RBP3□□□□□ -1.93
TUBE1-207ENST00000604689 LCE1EQ5T753 118 aa3□□□□□ -1.93
TUBE1-207ENST00000604689 KRTAP9-8Q9BYQ0 159 aa3□□□□□ -1.93
TUBE1-207ENST00000604689 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
TUBE1-207ENST00000604689 MUC2Q02817 5179 aa2.98□□□□□ -1.93
TUBE1-207ENST00000604689 TNP1P09430 55 aa2.98□□□□□ -1.93
TUBE1-207ENST00000604689 KRTAP10-12P60413 245 aa2.94□□□□□ -1.94
TUBE1-207ENST00000604689 KRTAP4-9Q9BYQ8 210 aa2.93□□□□□ -1.94
TUBE1-207ENST00000604689 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
TUBE1-207ENST00000604689 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
TUBE1-207ENST00000604689 HMCN2Q8NDA2 5059 aa2.85□□□□□ -1.95
TUBE1-207ENST00000604689 KRTAP4-1Q9BYQ7 146 aa2.83□□□□□ -1.96
TUBE1-207ENST00000604689 MT1HL1P0DM35 61 aa2.81□□□□□ -1.96
TUBE1-207ENST00000604689 KRTAP10-10P60014 251 aa2.81□□□□□ -1.96
TUBE1-207ENST00000604689 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
TUBE1-207ENST00000604689 FAT4Q6V0I7 4981 aa2.8□□□□□ -1.96
TUBE1-207ENST00000604689 KRTAP19-2Q3LHN2 52 aa2.77□□□□□ -1.97
TUBE1-207ENST00000604689 LCE3AQ5TA76 89 aa2.74□□□□□ -1.97
TUBE1-207ENST00000604689 KRTAP4-5Q9BYR2 181 aa2.73□□□□□ -1.97
TUBE1-207ENST00000604689 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
TUBE1-207ENST00000604689 UBR4Q5T4S7 5183 aa2.71□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms