Protein–RNA interactions for Protein: Q9BQ66

KRTAP4-12, Keratin-associated protein 4-12, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-12Q9BQ66 AC079416.2-201ENST00000625035 1193 ntBASIC13.88□□□□□ -0.19
KRTAP4-12Q9BQ66 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRTAP4-12Q9BQ66 AP001002.2-201ENST00000625137 386 ntBASIC13.31□□□□□ -0.28
KRTAP4-12Q9BQ66 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.3□□□□□ -0.28
KRTAP4-12Q9BQ66 AC092473.1-201ENST00000441098 221 ntBASIC13.23□□□□□ -0.29
KRTAP4-12Q9BQ66 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
KRTAP4-12Q9BQ66 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC13.07□□□□□ -0.32
KRTAP4-12Q9BQ66 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC13□□□□□ -0.33
KRTAP4-12Q9BQ66 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KRTAP4-12Q9BQ66 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP4-12Q9BQ66 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP4-12Q9BQ66 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC12.84□□□□□ -0.35
KRTAP4-12Q9BQ66 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.83□□□□□ -0.36
KRTAP4-12Q9BQ66 BNIP3P41-202ENST00000616656 861 ntBASIC12.82□□□□□ -0.36
KRTAP4-12Q9BQ66 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC12.82□□□□□ -0.36
KRTAP4-12Q9BQ66 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
KRTAP4-12Q9BQ66 Z99916.3-201ENST00000623422 1080 ntBASIC12.58□□□□□ -0.4
KRTAP4-12Q9BQ66 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KRTAP4-12Q9BQ66 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
KRTAP4-12Q9BQ66 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP4-12Q9BQ66 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC12.48□□□□□ -0.41
KRTAP4-12Q9BQ66 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC12.46□□□□□ -0.41
KRTAP4-12Q9BQ66 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC12.44□□□□□ -0.42
KRTAP4-12Q9BQ66 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC12.43□□□□□ -0.42
KRTAP4-12Q9BQ66 TMEM14EP-202ENST00000639378 1296 ntBASIC12.42□□□□□ -0.42
KRTAP4-12Q9BQ66 AL390728.6-201ENST00000566446 1246 ntBASIC12.41□□□□□ -0.42
KRTAP4-12Q9BQ66 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
KRTAP4-12Q9BQ66 AC108359.1-201ENST00000616451 1211 ntBASIC12.33□□□□□ -0.44
KRTAP4-12Q9BQ66 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
KRTAP4-12Q9BQ66 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
KRTAP4-12Q9BQ66 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC12.3□□□□□ -0.44
KRTAP4-12Q9BQ66 AC006213.4-201ENST00000616184 634 ntBASIC12.28□□□□□ -0.44
KRTAP4-12Q9BQ66 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC12.26□□□□□ -0.45
KRTAP4-12Q9BQ66 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC12.26□□□□□ -0.45
KRTAP4-12Q9BQ66 NIFKP4-201ENST00000567275 1192 ntBASIC12.25□□□□□ -0.45
KRTAP4-12Q9BQ66 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC12.24□□□□□ -0.45
KRTAP4-12Q9BQ66 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC12.24□□□□□ -0.45
KRTAP4-12Q9BQ66 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC12.23□□□□□ -0.45
KRTAP4-12Q9BQ66 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC12.22□□□□□ -0.45
KRTAP4-12Q9BQ66 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
KRTAP4-12Q9BQ66 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC12.19□□□□□ -0.46
KRTAP4-12Q9BQ66 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-12Q9BQ66 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP4-12Q9BQ66 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC12.17□□□□□ -0.46
KRTAP4-12Q9BQ66 AKR1B10P2-201ENST00000577332 927 ntBASIC12.17□□□□□ -0.46
KRTAP4-12Q9BQ66 AL365223.1-201ENST00000574864 1297 ntBASIC12.12□□□□□ -0.47
KRTAP4-12Q9BQ66 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC12.12□□□□□ -0.47
KRTAP4-12Q9BQ66 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
KRTAP4-12Q9BQ66 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC12.1□□□□□ -0.47
KRTAP4-12Q9BQ66 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC12.09□□□□□ -0.47
KRTAP4-12Q9BQ66 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC12.09□□□□□ -0.47
KRTAP4-12Q9BQ66 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC12.08□□□□□ -0.48
KRTAP4-12Q9BQ66 RN7SL718P-201ENST00000581254 303 ntBASIC12.08□□□□□ -0.48
KRTAP4-12Q9BQ66 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP4-12Q9BQ66 AC009948.4-201ENST00000604692 675 ntBASIC12.07□□□□□ -0.48
KRTAP4-12Q9BQ66 AC098799.1-201ENST00000504752 800 ntBASIC12.06□□□□□ -0.48
KRTAP4-12Q9BQ66 KATNBL1P2-201ENST00000433311 835 ntBASIC12.04□□□□□ -0.48
KRTAP4-12Q9BQ66 MTND4LP12-201ENST00000448237 295 ntBASIC12.03□□□□□ -0.48
KRTAP4-12Q9BQ66 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC12□□□□□ -0.49
KRTAP4-12Q9BQ66 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC11.99□□□□□ -0.49
KRTAP4-12Q9BQ66 AC137695.1-201ENST00000604126 489 ntBASIC11.98□□□□□ -0.49
KRTAP4-12Q9BQ66 RN7SL275P-201ENST00000582762 335 ntBASIC11.97□□□□□ -0.49
KRTAP4-12Q9BQ66 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP4-12Q9BQ66 RN7SL602P-201ENST00000578326 324 ntBASIC11.94□□□□□ -0.5
KRTAP4-12Q9BQ66 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC11.91□□□□□ -0.5
KRTAP4-12Q9BQ66 AC022726.2-201ENST00000634673 547 ntBASIC11.91□□□□□ -0.5
KRTAP4-12Q9BQ66 AL078595.1-201ENST00000404458 226 ntBASIC11.9□□□□□ -0.5
KRTAP4-12Q9BQ66 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC11.89□□□□□ -0.51
KRTAP4-12Q9BQ66 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC11.88□□□□□ -0.51
KRTAP4-12Q9BQ66 MTATP6P19-201ENST00000413797 659 ntBASIC11.87□□□□□ -0.51
KRTAP4-12Q9BQ66 PAX6-247ENST00000638965 979 ntTSL 5 BASIC11.87□□□□□ -0.51
KRTAP4-12Q9BQ66 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC11.85□□□□□ -0.51
KRTAP4-12Q9BQ66 AC012497.1-201ENST00000429392 575 ntBASIC11.84□□□□□ -0.51
KRTAP4-12Q9BQ66 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC11.84□□□□□ -0.51
KRTAP4-12Q9BQ66 MTND2P7-201ENST00000521337 640 ntBASIC11.84□□□□□ -0.51
KRTAP4-12Q9BQ66 AC009712.1-201ENST00000564938 316 ntBASIC11.84□□□□□ -0.51
KRTAP4-12Q9BQ66 AC016180.1-201ENST00000567945 403 ntBASIC11.84□□□□□ -0.51
KRTAP4-12Q9BQ66 STK33P1-201ENST00000423835 1218 ntBASIC11.83□□□□□ -0.52
KRTAP4-12Q9BQ66 AP003400.6-201ENST00000624698 740 ntBASIC11.83□□□□□ -0.52
KRTAP4-12Q9BQ66 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP4-12Q9BQ66 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
KRTAP4-12Q9BQ66 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC11.79□□□□□ -0.52
KRTAP4-12Q9BQ66 AC026790.2-201ENST00000606282 430 ntBASIC11.79□□□□□ -0.52
KRTAP4-12Q9BQ66 AP000240.1-201ENST00000609910 452 ntBASIC11.78□□□□□ -0.52
KRTAP4-12Q9BQ66 AC020910.4-201ENST00000612269 540 ntBASIC11.78□□□□□ -0.52
KRTAP4-12Q9BQ66 AC022079.1-201ENST00000621546 602 ntBASIC11.78□□□□□ -0.52
KRTAP4-12Q9BQ66 SEPT7P7-201ENST00000420492 1301 ntBASIC11.75□□□□□ -0.53
KRTAP4-12Q9BQ66 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP4-12Q9BQ66 LST1-206ENST00000376090 689 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP4-12Q9BQ66 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP4-12Q9BQ66 LST1-209ENST00000376096 565 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP4-12Q9BQ66 LST1-210ENST00000376099 610 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP4-12Q9BQ66 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP4-12Q9BQ66 LST1-214ENST00000418507 726 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP4-12Q9BQ66 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP4-12Q9BQ66 EIF2S2P5-201ENST00000457635 968 ntBASIC11.74□□□□□ -0.53
KRTAP4-12Q9BQ66 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP4-12Q9BQ66 AL353729.2-201ENST00000605859 1249 ntBASIC11.73□□□□□ -0.53
KRTAP4-12Q9BQ66 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC11.71□□□□□ -0.53
KRTAP4-12Q9BQ66 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms