RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 APLNQ9ULZ1 77 aa3.82□□□□□ -1.8
LINC00347-202ENST00000594461 CSMD3Q7Z407 3707 aa3.82□□□□□ -1.8
LINC00347-202ENST00000594461 KRTAP13-1Q8IUC0 172 aa3.82□□□□□ -1.8
LINC00347-202ENST00000594461 H3BNG1 76 aa3.81□□□□□ -1.8
LINC00347-202ENST00000594461 S4R3F8 94 aa3.81□□□□□ -1.8
LINC00347-202ENST00000594461 UBE2DNLQ8IWF7 75 aa3.8□□□□□ -1.8
LINC00347-202ENST00000594461 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
LINC00347-202ENST00000594461 DNAH7Q8WXX0 4024 aa3.78□□□□□ -1.8
LINC00347-202ENST00000594461 STARD9Q9P2P6 4700 aa3.77□□□□□ -1.81
LINC00347-202ENST00000594461 KRTAP10-8P60410 259 aa3.77□□□□□ -1.81
LINC00347-202ENST00000594461 KRTAP13-4Q3LI77 160 aa3.76□□□□□ -1.81
LINC00347-202ENST00000594461 INE1O15225 51 aa3.75□□□□□ -1.81
LINC00347-202ENST00000594461 PLECQ15149 4684 aaKnown RBP3.75□□□□□ -1.81
LINC00347-202ENST00000594461 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
LINC00347-202ENST00000594461 KRTAP10-6P60371 365 aaPredicted RBP3.71□□□□□ -1.81
LINC00347-202ENST00000594461 KRTAP3-1Q9BYR8 98 aa3.7□□□□□ -1.82
LINC00347-202ENST00000594461 DMBT1Q9UGM3 2413 aaPredicted RBP3.7□□□□□ -1.82
LINC00347-202ENST00000594461 DNAH1Q9P2D7 4330 aa3.7□□□□□ -1.82
LINC00347-202ENST00000594461 DNAH10Q8IVF4 4471 aa3.69□□□□□ -1.82
LINC00347-202ENST00000594461 KRTAP1-5Q9BYS1 174 aa3.69□□□□□ -1.82
LINC00347-202ENST00000594461 KMT2AQ03164 3969 aa3.68□□□□□ -1.82
LINC00347-202ENST00000594461 DYNC2H1Q8NCM8 4307 aaKnown RBP3.68□□□□□ -1.82
LINC00347-202ENST00000594461 KRTAP12-1P59990 96 aa3.66□□□□□ -1.82
LINC00347-202ENST00000594461 HYDINQ4G0P3 5121 aa3.64□□□□□ -1.83
LINC00347-202ENST00000594461 VPS13DQ5THJ4 4388 aa3.63□□□□□ -1.83
LINC00347-202ENST00000594461 DNAH2Q9P225 4427 aa3.62□□□□□ -1.83
LINC00347-202ENST00000594461 KMT2CQ8NEZ4 4911 aaKnown RBP3.61□□□□□ -1.83
LINC00347-202ENST00000594461 FRAS1Q86XX4 4008 aa3.6□□□□□ -1.83
LINC00347-202ENST00000594461 SACSQ9NZJ4 4579 aa3.59□□□□□ -1.83
LINC00347-202ENST00000594461 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
LINC00347-202ENST00000594461 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
LINC00347-202ENST00000594461 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
LINC00347-202ENST00000594461 RYR3Q15413 4870 aa3.55□□□□□ -1.84
LINC00347-202ENST00000594461 KRTAP10-2P60368 255 aa3.54□□□□□ -1.84
LINC00347-202ENST00000594461 RYR2Q92736 4967 aa3.53□□□□□ -1.84
LINC00347-202ENST00000594461 DNAH6Q9C0G6 4158 aa3.53□□□□□ -1.84
LINC00347-202ENST00000594461 FAT2Q9NYQ8 4349 aa3.52□□□□□ -1.85
LINC00347-202ENST00000594461 HECTD4Q9Y4D8 3996 aa3.52□□□□□ -1.85
LINC00347-202ENST00000594461 DNAH17Q9UFH2 4485 aa3.52□□□□□ -1.85
LINC00347-202ENST00000594461 PKHD1P08F94 4074 aa3.51□□□□□ -1.85
LINC00347-202ENST00000594461 DNAH11Q96DT5 4516 aa3.5□□□□□ -1.85
LINC00347-202ENST00000594461 PKD1P98161 4303 aa3.5□□□□□ -1.85
LINC00347-202ENST00000594461 DNAH5Q8TE73 4624 aa3.48□□□□□ -1.85
LINC00347-202ENST00000594461 KRTAP10-1P60331 282 aa3.48□□□□□ -1.85
LINC00347-202ENST00000594461 M0QZ58 72 aa3.46□□□□□ -1.86
LINC00347-202ENST00000594461 SMR3BP02814 79 aaPredicted RBP3.45□□□□□ -1.86
LINC00347-202ENST00000594461 BIRC6Q9NR09 4857 aa3.44□□□□□ -1.86
LINC00347-202ENST00000594461 DYNC1H1Q14204 4646 aaKnown RBP3.43□□□□□ -1.86
LINC00347-202ENST00000594461 DNAH8Q96JB1 4490 aa3.43□□□□□ -1.86
LINC00347-202ENST00000594461 A0A1B0GVY2 172 aa3.43□□□□□ -1.86
LINC00347-202ENST00000594461 EPPK1P58107 5090 aaKnown RBP3.43□□□□□ -1.86
LINC00347-202ENST00000594461 LRP1BQ9NZR2 4599 aa3.43□□□□□ -1.86
LINC00347-202ENST00000594461 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
LINC00347-202ENST00000594461 KRTAP13-2Q52LG2 175 aa3.4□□□□□ -1.87
LINC00347-202ENST00000594461 PCLOQ9Y6V0 5065 aa3.38□□□□□ -1.87
LINC00347-202ENST00000594461 FAT1Q14517 4588 aa3.38□□□□□ -1.87
LINC00347-202ENST00000594461 APOBP04114 4563 aaKnown RBP3.37□□□□□ -1.87
LINC00347-202ENST00000594461 KIAA1109Q2LD37 5005 aa3.35□□□□□ -1.87
LINC00347-202ENST00000594461 VPS13BQ7Z7G8 4022 aa3.34□□□□□ -1.87
LINC00347-202ENST00000594461 HSPG2P98160 4391 aa3.33□□□□□ -1.88
LINC00347-202ENST00000594461 MYCBP2O75592 4640 aa3.32□□□□□ -1.88
LINC00347-202ENST00000594461 Q5VSD8 79 aa3.32□□□□□ -1.88
LINC00347-202ENST00000594461 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
LINC00347-202ENST00000594461 RYR1P21817 5038 aa3.29□□□□□ -1.88
LINC00347-202ENST00000594461 C9orf92A6NGG3 77 aa3.28□□□□□ -1.88
LINC00347-202ENST00000594461 LRP1Q07954 4544 aaKnown RBP3.27□□□□□ -1.89
LINC00347-202ENST00000594461 KRTAP10-4P60372 401 aaPredicted RBP3.26□□□□□ -1.89
LINC00347-202ENST00000594461 KRTAP9-3Q9BYQ3 159 aa3.25□□□□□ -1.89
LINC00347-202ENST00000594461 RPS29P62273 56 aaKnown RBP3.25□□□□□ -1.89
LINC00347-202ENST00000594461 KRTAP1-4P0C5Y4 121 aa3.23□□□□□ -1.89
LINC00347-202ENST00000594461 ABCA13Q86UQ4 5058 aa3.21□□□□□ -1.9
LINC00347-202ENST00000594461 PKHD1L1Q86WI1 4243 aa3.21□□□□□ -1.9
LINC00347-202ENST00000594461 KRTAP9-7A8MTY7 169 aa3.19□□□□□ -1.9
LINC00347-202ENST00000594461 HERC2O95714 4834 aa3.19□□□□□ -1.9
LINC00347-202ENST00000594461 FAT3Q8TDW7 4589 aa3.17□□□□□ -1.9
LINC00347-202ENST00000594461 TNXBP22105 4242 aa3.15□□□□□ -1.91
LINC00347-202ENST00000594461 MT1HL1P0DM35 61 aa3.13□□□□□ -1.91
LINC00347-202ENST00000594461 TNP1P09430 55 aa3.1□□□□□ -1.91
LINC00347-202ENST00000594461 UBR4Q5T4S7 5183 aa3.09□□□□□ -1.92
LINC00347-202ENST00000594461 KRTAP10-10P60014 251 aa3.09□□□□□ -1.92
LINC00347-202ENST00000594461 HERC1Q15751 4861 aa3.08□□□□□ -1.92
LINC00347-202ENST00000594461 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
LINC00347-202ENST00000594461 LPAP08519 4548 aa3.07□□□□□ -1.92
LINC00347-202ENST00000594461 LRP2P98164 4655 aa2.99□□□□□ -1.93
LINC00347-202ENST00000594461 KRTAP19-4Q3LI73 84 aa2.97□□□□□ -1.93
LINC00347-202ENST00000594461 HMCN2Q8NDA2 5059 aa2.94□□□□□ -1.94
LINC00347-202ENST00000594461 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
LINC00347-202ENST00000594461 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
LINC00347-202ENST00000594461 MUC2Q02817 5179 aa2.91□□□□□ -1.94
LINC00347-202ENST00000594461 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
LINC00347-202ENST00000594461 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
LINC00347-202ENST00000594461 KRTAP4-1Q9BYQ7 146 aa2.88□□□□□ -1.95
LINC00347-202ENST00000594461 RNF213Q63HN8 5207 aa2.87□□□□□ -1.95
LINC00347-202ENST00000594461 KRTAP10-12P60413 245 aa2.82□□□□□ -1.96
LINC00347-202ENST00000594461 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
LINC00347-202ENST00000594461 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
LINC00347-202ENST00000594461 MUC17Q685J3 4493 aa2.8□□□□□ -1.96
LINC00347-202ENST00000594461 KRTAP10-7P60409 375 aaPredicted RBP2.78□□□□□ -1.96
LINC00347-202ENST00000594461 FAT4Q6V0I7 4981 aa2.77□□□□□ -1.97
LINC00347-202ENST00000594461 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms