RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 PELP1Q8IZL8 1130 aaKnown RBP13.67□□□□□ -0.22
LINC00347-202ENST00000594461 MYT1Q01538 1121 aa13.56□□□□□ -0.24
LINC00347-202ENST00000594461 POTEDQ86YR6 584 aa13.52□□□□□ -0.25
LINC00347-202ENST00000594461 TTBK1Q5TCY1 1321 aaPredicted RBP13.13□□□□□ -0.31
LINC00347-202ENST00000594461 SLC24A1O60721 1099 aa12.78□□□□□ -0.36
LINC00347-202ENST00000594461 PRKCSHP14314 528 aaPredicted RBP12.78□□□□□ -0.36
LINC00347-202ENST00000594461 ERICH6Q7L0X2 663 aa12.59□□□□□ -0.39
LINC00347-202ENST00000594461 APLP2Q06481 763 aa12.57□□□□□ -0.4
LINC00347-202ENST00000594461 NISCHQ9Y2I1 1504 aa12.47□□□□□ -0.41
LINC00347-202ENST00000594461 BCL11AQ9H165 835 aa12.3□□□□□ -0.44
LINC00347-202ENST00000594461 HRCP23327 699 aa12.23□□□□□ -0.45
LINC00347-202ENST00000594461 DAXXQ9UER7 740 aaPredicted RBP12.18□□□□□ -0.46
LINC00347-202ENST00000594461 SCAF1Q9H7N4 1312 aaKnown RBP12.14□□□□□ -0.47
LINC00347-202ENST00000594461 FAM9AQ8IZU1 332 aaPredicted RBP12.12□□□□□ -0.47
LINC00347-202ENST00000594461 AEBP2Q6ZN18 517 aaPredicted RBP11.97□□□□□ -0.49
LINC00347-202ENST00000594461 CENPBP07199 599 aaPredicted RBP11.84□□□□□ -0.51
LINC00347-202ENST00000594461 EIF5BO60841 1220 aaKnown RBP11.83□□□□□ -0.52
LINC00347-202ENST00000594461 PPARGC1BQ86YN6 1023 aaKnown RBP11.76□□□□□ -0.53
LINC00347-202ENST00000594461 CHIC1Q5VXU3 224 aa11.63□□□□□ -0.55
LINC00347-202ENST00000594461 ANP32EQ9BTT0 268 aa11.56□□□□□ -0.56
LINC00347-202ENST00000594461 ACIN1Q9UKV3 1341 aaKnown RBP11.55□□□□□ -0.56
LINC00347-202ENST00000594461 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
LINC00347-202ENST00000594461 UBE2Q2Q8WVN8 375 aa11.49□□□□□ -0.57
LINC00347-202ENST00000594461 GTF3C3Q9Y5Q9 886 aa11.46□□□□□ -0.58
LINC00347-202ENST00000594461 CSRNP3Q8WYN3 585 aa11.4□□□□□ -0.58
LINC00347-202ENST00000594461 NEUROD1Q13562 356 aa11.39□□□□□ -0.59
LINC00347-202ENST00000594461 ANO8Q9HCE9 1232 aaPredicted RBP11.36□□□□□ -0.59
LINC00347-202ENST00000594461 PODXL2Q9NZ53 605 aa11.36□□□□□ -0.59
LINC00347-202ENST00000594461 PCGF6Q9BYE7 350 aa11.3□□□□□ -0.6
LINC00347-202ENST00000594461 NCBP3Q53F19 620 aaKnown RBP11.29□□□□□ -0.6
LINC00347-202ENST00000594461 ZEB1P37275 1124 aaPredicted RBP11.26□□□□□ -0.61
LINC00347-202ENST00000594461 PKNOX2Q96KN3 472 aa11.24□□□□□ -0.61
LINC00347-202ENST00000594461 RANGAP1P46060 587 aaPredicted RBP11.12□□□□□ -0.63
LINC00347-202ENST00000594461 ARXQ96QS3 562 aa11.11□□□□□ -0.63
LINC00347-202ENST00000594461 KLHL34Q8N239 644 aa11.06□□□□□ -0.64
LINC00347-202ENST00000594461 SALL2Q9Y467 1007 aaPredicted RBP11.06□□□□□ -0.64
LINC00347-202ENST00000594461 ERICH6BQ5W0A0 696 aa11.03□□□□□ -0.64
LINC00347-202ENST00000594461 NEFLP07196 543 aa11.01□□□□□ -0.65
LINC00347-202ENST00000594461 CCDC136Q96JN2 1154 aa10.99□□□□□ -0.65
LINC00347-202ENST00000594461 PDIA4P13667 645 aaKnown RBP10.97□□□□□ -0.65
LINC00347-202ENST00000594461 SENP3Q9H4L4 574 aaPredicted RBP10.97□□□□□ -0.65
LINC00347-202ENST00000594461 PDE4CQ08493 712 aa10.94□□□□□ -0.66
LINC00347-202ENST00000594461 TSHZ2Q9NRE2 1034 aa10.92□□□□□ -0.66
LINC00347-202ENST00000594461 MYT1LQ9UL68 1186 aa10.91□□□□□ -0.66
LINC00347-202ENST00000594461 TIMELESSQ9UNS1 1208 aa10.9□□□□□ -0.66
LINC00347-202ENST00000594461 PLPPR3Q6T4P5 718 aa10.85□□□□□ -0.67
LINC00347-202ENST00000594461 RTN4Q9NQC3 1192 aaKnown RBP10.85□□□□□ -0.67
LINC00347-202ENST00000594461 CCDC180Q9P1Z9 1646 aa10.83□□□□□ -0.68
LINC00347-202ENST00000594461 MYO15BQ96JP2 1530 aa10.82□□□□□ -0.68
LINC00347-202ENST00000594461 FGD1P98174 961 aa10.81□□□□□ -0.68
LINC00347-202ENST00000594461 CLSPNQ9HAW4 1339 aa10.78□□□□□ -0.68
LINC00347-202ENST00000594461 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.76□□□□□ -0.69
LINC00347-202ENST00000594461 DEKP35659 375 aaKnown RBP10.75□□□□□ -0.69
LINC00347-202ENST00000594461 TRIM26Q12899 539 aaPredicted RBP10.75□□□□□ -0.69
LINC00347-202ENST00000594461 BCL11BQ9C0K0 894 aaPredicted RBP10.74□□□□□ -0.69
LINC00347-202ENST00000594461 DCAF1Q9Y4B6 1507 aa10.72□□□□□ -0.69
LINC00347-202ENST00000594461 TAF7LQ5H9L4 462 aa10.72□□□□□ -0.69
LINC00347-202ENST00000594461 HOMEZQ8IX15 550 aa10.71□□□□□ -0.69
LINC00347-202ENST00000594461 DIEXFQ68CQ4 756 aaKnown RBP10.7□□□□□ -0.7
LINC00347-202ENST00000594461 GLIPR1L2Q4G1C9 344 aa10.69□□□□□ -0.7
LINC00347-202ENST00000594461 AAMPQ13685 434 aa10.68□□□□□ -0.7
LINC00347-202ENST00000594461 MSH5O43196 834 aa10.68□□□□□ -0.7
LINC00347-202ENST00000594461 A0A0U1RQG5 324 aaPredicted RBP10.67□□□□□ -0.7
LINC00347-202ENST00000594461 TULP1O00294 542 aaPredicted RBP10.66□□□□□ -0.7
LINC00347-202ENST00000594461 DCAF8L2P0C7V8 631 aa10.66□□□□□ -0.7
LINC00347-202ENST00000594461 ZMYND15Q9H091 742 aa10.66□□□□□ -0.7
LINC00347-202ENST00000594461 ABCC9O60706 1549 aa10.66□□□□□ -0.7
LINC00347-202ENST00000594461 SUPT16HQ9Y5B9 1047 aaKnown RBP10.66□□□□□ -0.7
LINC00347-202ENST00000594461 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
LINC00347-202ENST00000594461 RBM10P98175 930 aaKnown RBP10.61□□□□□ -0.71
LINC00347-202ENST00000594461 RBM19Q9Y4C8 960 aaKnown RBP10.56□□□□□ -0.72
LINC00347-202ENST00000594461 RSPH6AQ9H0K4 717 aa10.55□□□□□ -0.72
LINC00347-202ENST00000594461 YTHDC1Q96MU7 727 aaKnown RBP10.55□□□□□ -0.72
LINC00347-202ENST00000594461 VSIG10Q8N0Z9 540 aa10.54□□□□□ -0.72
LINC00347-202ENST00000594461 IL27Q8NEV9 243 aa10.52□□□□□ -0.73
LINC00347-202ENST00000594461 CHMP4AQ9BY43 222 aa10.52□□□□□ -0.73
LINC00347-202ENST00000594461 BRD2P25440 801 aaKnown RBP10.51□□□□□ -0.73
LINC00347-202ENST00000594461 NPM2Q86SE8 214 aaKnown RBP10.5□□□□□ -0.73
LINC00347-202ENST00000594461 DHX37Q8IY37 1157 aaKnown RBP10.48□□□□□ -0.73
LINC00347-202ENST00000594461 RSPH4AQ5TD94 716 aa10.46□□□□□ -0.74
LINC00347-202ENST00000594461 FANCIQ9NVI1 1328 aa10.46□□□□□ -0.74
LINC00347-202ENST00000594461 ZNF326Q5BKZ1 582 aaKnown RBP10.44□□□□□ -0.74
LINC00347-202ENST00000594461 ZCCHC6Q5VYS8 1495 aaKnown RBP10.44□□□□□ -0.74
LINC00347-202ENST00000594461 PAXIP1Q6ZW49 1069 aaPredicted RBP10.44□□□□□ -0.74
LINC00347-202ENST00000594461 AMER1Q5JTC6 1135 aaPredicted RBP10.41□□□□□ -0.74
LINC00347-202ENST00000594461 SAMD1Q6SPF0 538 aaPredicted RBP10.41□□□□□ -0.74
LINC00347-202ENST00000594461 TRIM41Q8WV44 630 aa10.41□□□□□ -0.74
LINC00347-202ENST00000594461 SHROOM4Q9ULL8 1493 aa10.4□□□□□ -0.74
LINC00347-202ENST00000594461 HAP1P54257 671 aaPredicted RBP10.39□□□□□ -0.75
LINC00347-202ENST00000594461 LOC105371045A0A1W2PR82 267 aa10.39□□□□□ -0.75
LINC00347-202ENST00000594461 C14orf37Q86TY3 774 aa10.38□□□□□ -0.75
LINC00347-202ENST00000594461 NAP1L5Q96NT1 182 aaPredicted RBP10.38□□□□□ -0.75
LINC00347-202ENST00000594461 PHF23Q9BUL5 403 aaPredicted RBP10.33□□□□□ -0.76
LINC00347-202ENST00000594461 NAP1L2Q9ULW6 460 aaPredicted RBP10.32□□□□□ -0.76
LINC00347-202ENST00000594461 CCER1Q8TC90 406 aaPredicted RBP10.31□□□□□ -0.76
LINC00347-202ENST00000594461 TAOK2Q9UL54 1235 aa10.31□□□□□ -0.76
LINC00347-202ENST00000594461 C11orf95C9JLR9 678 aaPredicted RBP10.29□□□□□ -0.76
LINC00347-202ENST00000594461 CNKSR2Q8WXI2 1034 aa10.28□□□□□ -0.76
LINC00347-202ENST00000594461 MIER1Q8N108 512 aa10.28□□□□□ -0.76
LINC00347-202ENST00000594461 POTEHQ6S545 545 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms