RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 DNAH3Q8TD57 4116 aa5.05□□□□□ -1.6
LSM14A-206ENST00000588582 KMT2AQ03164 3969 aa5.04□□□□□ -1.6
LSM14A-206ENST00000588582 DNAH2Q9P225 4427 aa5.04□□□□□ -1.6
LSM14A-206ENST00000588582 STARD9Q9P2P6 4700 aa4.99□□□□□ -1.61
LSM14A-206ENST00000588582 PP632Q6XCG6 107 aa4.98□□□□□ -1.61
LSM14A-206ENST00000588582 DNAH6Q9C0G6 4158 aa4.98□□□□□ -1.61
LSM14A-206ENST00000588582 MYCBP2O75592 4640 aa4.97□□□□□ -1.61
LSM14A-206ENST00000588582 Q5VSD8 79 aa4.95□□□□□ -1.62
LSM14A-206ENST00000588582 HECTD4Q9Y4D8 3996 aa4.94□□□□□ -1.62
LSM14A-206ENST00000588582 TNP1P09430 55 aa4.94□□□□□ -1.62
LSM14A-206ENST00000588582 VPS13BQ7Z7G8 4022 aa4.91□□□□□ -1.62
LSM14A-206ENST00000588582 FAT1Q14517 4588 aa4.9□□□□□ -1.62
LSM14A-206ENST00000588582 DYNC2H1Q8NCM8 4307 aaKnown RBP4.88□□□□□ -1.63
LSM14A-206ENST00000588582 VPS13DQ5THJ4 4388 aa4.87□□□□□ -1.63
LSM14A-206ENST00000588582 LORP23490 312 aaPredicted RBP4.84□□□□□ -1.63
LSM14A-206ENST00000588582 APOBP04114 4563 aaKnown RBP4.83□□□□□ -1.64
LSM14A-206ENST00000588582 DNAH5Q8TE73 4624 aa4.82□□□□□ -1.64
LSM14A-206ENST00000588582 A0A1B0GVY2 172 aa4.8□□□□□ -1.64
LSM14A-206ENST00000588582 PRKDCP78527 4128 aaKnown RBP4.76□□□□□ -1.65
LSM14A-206ENST00000588582 PRO2289Q9P1D8 64 aa4.74□□□□□ -1.65
LSM14A-206ENST00000588582 LRP1Q07954 4544 aaKnown RBP4.73□□□□□ -1.65
LSM14A-206ENST00000588582 DYNC1H1Q14204 4646 aaKnown RBP4.73□□□□□ -1.65
LSM14A-206ENST00000588582 FAT3Q8TDW7 4589 aa4.69□□□□□ -1.66
LSM14A-206ENST00000588582 M0R2T5 61 aa4.67□□□□□ -1.66
LSM14A-206ENST00000588582 KRTAP10-4P60372 401 aaPredicted RBP4.66□□□□□ -1.66
LSM14A-206ENST00000588582 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
LSM14A-206ENST00000588582 PKHD1P08F94 4074 aa4.62□□□□□ -1.67
LSM14A-206ENST00000588582 FAT2Q9NYQ8 4349 aa4.62□□□□□ -1.67
LSM14A-206ENST00000588582 SACSQ9NZJ4 4579 aa4.61□□□□□ -1.67
LSM14A-206ENST00000588582 HSPG2P98160 4391 aa4.59□□□□□ -1.67
LSM14A-206ENST00000588582 HYDINQ4G0P3 5121 aa4.58□□□□□ -1.68
LSM14A-206ENST00000588582 INE1O15225 51 aa4.56□□□□□ -1.68
LSM14A-206ENST00000588582 LRP2P98164 4655 aa4.55□□□□□ -1.68
LSM14A-206ENST00000588582 DNHD1Q96M86 4753 aa4.54□□□□□ -1.68
LSM14A-206ENST00000588582 KRTAP21-3Q3LHN1 58 aa4.48□□□□□ -1.69
LSM14A-206ENST00000588582 MT1HL1P0DM35 61 aa4.45□□□□□ -1.7
LSM14A-206ENST00000588582 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
LSM14A-206ENST00000588582 LPAP08519 4548 aa4.43□□□□□ -1.7
LSM14A-206ENST00000588582 PKD1P98161 4303 aa4.4□□□□□ -1.7
LSM14A-206ENST00000588582 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
LSM14A-206ENST00000588582 KMT2CQ8NEZ4 4911 aaKnown RBP4.4□□□□□ -1.71
LSM14A-206ENST00000588582 RYR1P21817 5038 aa4.36□□□□□ -1.71
LSM14A-206ENST00000588582 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
LSM14A-206ENST00000588582 KRTAP10-10P60014 251 aa4.33□□□□□ -1.72
LSM14A-206ENST00000588582 KRTAP4-1Q9BYQ7 146 aa4.33□□□□□ -1.72
LSM14A-206ENST00000588582 PKHD1L1Q86WI1 4243 aa4.33□□□□□ -1.72
LSM14A-206ENST00000588582 KIAA1109Q2LD37 5005 aa4.31□□□□□ -1.72
LSM14A-206ENST00000588582 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
LSM14A-206ENST00000588582 KRTAP17-1Q9BYP8 105 aa4.2□□□□□ -1.74
LSM14A-206ENST00000588582 KRTAP4-5Q9BYR2 181 aa4.2□□□□□ -1.74
LSM14A-206ENST00000588582 KRTAP10-12P60413 245 aa4.16□□□□□ -1.74
LSM14A-206ENST00000588582 MUC2Q02817 5179 aa4.13□□□□□ -1.75
LSM14A-206ENST00000588582 TNXBP22105 4242 aa4.13□□□□□ -1.75
LSM14A-206ENST00000588582 RYR3Q15413 4870 aa4.12□□□□□ -1.75
LSM14A-206ENST00000588582 EPPK1P58107 5090 aaKnown RBP4.06□□□□□ -1.76
LSM14A-206ENST00000588582 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
LSM14A-206ENST00000588582 ABCA13Q86UQ4 5058 aa4.04□□□□□ -1.76
LSM14A-206ENST00000588582 RYR2Q92736 4967 aa4.01□□□□□ -1.77
LSM14A-206ENST00000588582 KRTAP19-1Q8IUB9 90 aa3.97□□□□□ -1.77
LSM14A-206ENST00000588582 SPRR2GQ9BYE4 73 aa3.95□□□□□ -1.78
LSM14A-206ENST00000588582 FAT4Q6V0I7 4981 aa3.93□□□□□ -1.78
LSM14A-206ENST00000588582 CRCT1Q9UGL9 99 aa3.93□□□□□ -1.78
LSM14A-206ENST00000588582 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.79
LSM14A-206ENST00000588582 MUC17Q685J3 4493 aa3.88□□□□□ -1.79
LSM14A-206ENST00000588582 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
LSM14A-206ENST00000588582 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
LSM14A-206ENST00000588582 MT1FP04733 61 aa3.87□□□□□ -1.79
LSM14A-206ENST00000588582 KRTAP19-2Q3LHN2 52 aa3.87□□□□□ -1.79
LSM14A-206ENST00000588582 KRTAP10-5P60370 271 aa3.84□□□□□ -1.79
LSM14A-206ENST00000588582 HMCN2Q8NDA2 5059 aa3.83□□□□□ -1.8
LSM14A-206ENST00000588582 MT2AP02795 61 aa3.83□□□□□ -1.8
LSM14A-206ENST00000588582 FLGP20930 4061 aaPredicted RBP3.83□□□□□ -1.8
LSM14A-206ENST00000588582 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
LSM14A-206ENST00000588582 MT1XP80297 61 aa3.8□□□□□ -1.8
LSM14A-206ENST00000588582 UBR4Q5T4S7 5183 aa3.77□□□□□ -1.81
LSM14A-206ENST00000588582 KRTAP4-7Q9BYR0 210 aa3.76□□□□□ -1.81
LSM14A-206ENST00000588582 HERC2O95714 4834 aa3.76□□□□□ -1.81
LSM14A-206ENST00000588582 RNF213Q63HN8 5207 aa3.75□□□□□ -1.81
LSM14A-206ENST00000588582 PCLOQ9Y6V0 5065 aa3.75□□□□□ -1.81
LSM14A-206ENST00000588582 MT1HP80294 61 aa3.74□□□□□ -1.81
LSM14A-206ENST00000588582 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
LSM14A-206ENST00000588582 LCE2AQ5TA79 106 aaPredicted RBP3.72□□□□□ -1.81
LSM14A-206ENST00000588582 KMT2DO14686 5537 aa3.7□□□□□ -1.82
LSM14A-206ENST00000588582 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
LSM14A-206ENST00000588582 MT1BP07438 61 aa3.69□□□□□ -1.82
LSM14A-206ENST00000588582 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
LSM14A-206ENST00000588582 KRTAP4-8Q9BYQ9 185 aa3.69□□□□□ -1.82
LSM14A-206ENST00000588582 LCE2BO14633 110 aa3.68□□□□□ -1.82
LSM14A-206ENST00000588582 LCE2CQ5TA81 110 aa3.64□□□□□ -1.83
LSM14A-206ENST00000588582 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
LSM14A-206ENST00000588582 KRTAP19-8Q3LI54 63 aa3.62□□□□□ -1.83
LSM14A-206ENST00000588582 HERC1Q15751 4861 aa3.61□□□□□ -1.83
LSM14A-206ENST00000588582 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
LSM14A-206ENST00000588582 USH2AO75445 5202 aa3.55□□□□□ -1.84
LSM14A-206ENST00000588582 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
LSM14A-206ENST00000588582 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
LSM14A-206ENST00000588582 BIRC6Q9NR09 4857 aa3.53□□□□□ -1.84
LSM14A-206ENST00000588582 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
LSM14A-206ENST00000588582 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
LSM14A-206ENST00000588582 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms