RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.4□□□□□ -0.597e-30■■■■■ 195.6
LSM14A-206ENST00000588582 SF3B1O75533 1304 aaKnown RBP eCLIP10.75□□□□□ -0.695e-7■■■■■ 114.9
LSM14A-206ENST00000588582 TARDBPQ13148 414 aaKnown RBP eCLIP10.24□□□□□ -0.778e-68■■■■■ 82.4
LSM14A-206ENST00000588582 DKC1O60832 514 aaKnown RBP eCLIP11.35□□□□□ -0.591e-42■■■■■ 42.1
LSM14A-206ENST00000588582 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.22□□□□□ -0.612e-6■■■■■ 31.6
LSM14A-206ENST00000588582 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.18□□□□□ -0.781e-9■■■■■ 31
LSM14A-206ENST00000588582 G3BP1Q13283 466 aaKnown RBP eCLIP12.01□□□□□ -0.493e-8■■■■■ 29.9
LSM14A-206ENST00000588582 ILF3Q12906 894 aaKnown RBP eCLIP9.92□□□□□ -0.829e-9■■■■■ 29.8
LSM14A-206ENST00000588582 TIA1P31483 386 aaKnown RBP eCLIP9.8□□□□□ -0.841e-16■■■■■ 29.1
LSM14A-206ENST00000588582 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.33□□□□□ -0.62e-8■■■■■ 28.9
LSM14A-206ENST00000588582 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.69□□□□□ -0.71e-7■■■■□ 26.3
LSM14A-206ENST00000588582 ZRANB2O95218 330 aaKnown RBP eCLIP11.99□□□□□ -0.494e-6■■■■□ 25.7
LSM14A-206ENST00000588582 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.332e-6■■■■□ 23.4
LSM14A-206ENST00000588582 TRA2AQ13595 282 aaKnown RBP eCLIP9.45□□□□□ -0.95e-6■■■■□ 22.5
LSM14A-206ENST00000588582 KHSRPQ92945 711 aaKnown RBP eCLIP10.09□□□□□ -0.793e-7■■■■□ 21
LSM14A-206ENST00000588582 SUB1P53999 127 aaKnown RBP eCLIP8.56□□□□□ -1.043e-7■■■□□ 19
LSM14A-206ENST00000588582 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.342e-6■■■□□ 15.8
LSM14A-206ENST00000588582 PPIGQ13427 754 aaKnown RBP eCLIP10.11□□□□□ -0.794e-7■■■□□ 15.6
LSM14A-206ENST00000588582 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.4□□□□□ -0.589e-15■■■□□ 15.4
LSM14A-206ENST00000588582 PTBP1P26599 531 aaKnown RBP eCLIP9.93□□□□□ -0.822e-6■■■□□ 15.2
LSM14A-206ENST00000588582 EIF4G2P78344 907 aaKnown RBP eCLIP13.84□□□□□ -0.191e-21■■■□□ 15
LSM14A-206ENST00000588582 TIAL1Q01085 375 aaKnown RBP eCLIP9.85□□□□□ -0.834e-10■■□□□ 14.2
LSM14A-206ENST00000588582 PABPC4Q13310 644 aaKnown RBP eCLIP11.14□□□□□ -0.634e-8■■□□□ 13.9
LSM14A-206ENST00000588582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.09□□□□□ -0.315e-8■■□□□ 12.4
LSM14A-206ENST00000588582 HNRNPCP07910 306 aaKnown RBP eCLIP11.51□□□□□ -0.571e-6■■□□□ 12.4
LSM14A-206ENST00000588582 DDX6P26196 483 aaKnown RBP eCLIP10.01□□□□□ -0.814e-6■■□□□ 11.6
LSM14A-206ENST00000588582 EFTUD2Q15029 972 aaKnown RBP eCLIP11□□□□□ -0.654e-6■■□□□ 11.5
LSM14A-206ENST00000588582 ZNF622Q969S3 477 aaKnown RBP eCLIP12.2□□□□□ -0.469e-9■□□□□ 10.9
LSM14A-206ENST00000588582 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.68□□□□□ -0.72e-6■□□□□ 10.9
LSM14A-206ENST00000588582 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.26□□□□□ -0.456e-8■□□□□ 10.8
LSM14A-206ENST00000588582 YBX3P16989 372 aaKnown RBP eCLIP10.3□□□□□ -0.762e-10■□□□□ 10.2
LSM14A-206ENST00000588582 PUM1Q14671 1186 aaKnown RBP eCLIP10.01□□□□□ -0.818e-13■□□□□ 10.2
LSM14A-206ENST00000588582 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.67□□□□□ -0.72e-8■□□□□ 9.4
LSM14A-206ENST00000588582 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.02□□□□□ -0.813e-6■□□□□ 9.3
LSM14A-206ENST00000588582 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.06□□□□□ -0.963e-6■□□□□ 9.2
LSM14A-206ENST00000588582 FXR2P51116 673 aaKnown RBP eCLIP10.86□□□□□ -0.675e-6■□□□□ 8.9
LSM14A-206ENST00000588582 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.55□□□□□ -1.048e-8■□□□□ 8.9
LSM14A-206ENST00000588582 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.16□□□□□ -0.942e-6■□□□□ 8.8
LSM14A-206ENST00000588582 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.34□□□□□ -0.591e-9■□□□□ 8.5
Retrieved 39 of 39 RNA–protein pairs in 45.7 ms