RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.39
LSM14A-206ENST00000588582 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
LSM14A-206ENST00000588582 PPARGC1BQ86YN6 1023 aaKnown RBP17.45■□□□□ 0.38
LSM14A-206ENST00000588582 HRCP23327 699 aa17.41■□□□□ 0.38
LSM14A-206ENST00000588582 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.36
LSM14A-206ENST00000588582 NISCHQ9Y2I1 1504 aa17.15■□□□□ 0.34
LSM14A-206ENST00000588582 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
LSM14A-206ENST00000588582 MYT1Q01538 1121 aa16.95■□□□□ 0.3
LSM14A-206ENST00000588582 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
LSM14A-206ENST00000588582 EHMT2Q96KQ7 1210 aa16.6■□□□□ 0.25
LSM14A-206ENST00000588582 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
LSM14A-206ENST00000588582 GTF3C3Q9Y5Q9 886 aa16.48■□□□□ 0.23
LSM14A-206ENST00000588582 YTHDC1Q96MU7 727 aaKnown RBP16.47■□□□□ 0.23
LSM14A-206ENST00000588582 LOC105371045A0A1W2PR82 267 aa16.42■□□□□ 0.22
LSM14A-206ENST00000588582 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
LSM14A-206ENST00000588582 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.21
LSM14A-206ENST00000588582 TRIM26Q12899 539 aaPredicted RBP16.36■□□□□ 0.21
LSM14A-206ENST00000588582 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
LSM14A-206ENST00000588582 ACIN1Q9UKV3 1341 aaKnown RBP16.31■□□□□ 0.2
LSM14A-206ENST00000588582 NEUROD1Q13562 356 aa16.3■□□□□ 0.2
LSM14A-206ENST00000588582 FAM9AQ8IZU1 332 aaPredicted RBP16.21■□□□□ 0.19
LSM14A-206ENST00000588582 TTBK1Q5TCY1 1321 aaPredicted RBP16.2■□□□□ 0.18
LSM14A-206ENST00000588582 CCER1Q8TC90 406 aaPredicted RBP16.19■□□□□ 0.18
LSM14A-206ENST00000588582 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
LSM14A-206ENST00000588582 MYO15BQ96JP2 1530 aa16.06■□□□□ 0.16
LSM14A-206ENST00000588582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
LSM14A-206ENST00000588582 BCL11AQ9H165 835 aa15.95■□□□□ 0.14
LSM14A-206ENST00000588582 ERICH6Q7L0X2 663 aa15.73■□□□□ 0.11
LSM14A-206ENST00000588582 BCANQ96GW7 911 aa15.7■□□□□ 0.1
LSM14A-206ENST00000588582 DCAF1Q9Y4B6 1507 aa15.67■□□□□ 0.1
LSM14A-206ENST00000588582 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
LSM14A-206ENST00000588582 ANP32EQ9BTT0 268 aa15.62■□□□□ 0.09
LSM14A-206ENST00000588582 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
LSM14A-206ENST00000588582 MIER1Q8N108 512 aa15.51■□□□□ 0.07
LSM14A-206ENST00000588582 ZNF316A6NFI3 1004 aaPredicted RBP15.49■□□□□ 0.07
LSM14A-206ENST00000588582 PRKCSHP14314 528 aaPredicted RBP15.43■□□□□ 0.06
LSM14A-206ENST00000588582 NEFLP07196 543 aa15.41■□□□□ 0.06
LSM14A-206ENST00000588582 CCDC180Q9P1Z9 1646 aa15.39■□□□□ 0.05
LSM14A-206ENST00000588582 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
LSM14A-206ENST00000588582 SUPT16HQ9Y5B9 1047 aaKnown RBP15.3■□□□□ 0.04
LSM14A-206ENST00000588582 TSHZ2Q9NRE2 1034 aa15.29■□□□□ 0.04
LSM14A-206ENST00000588582 ITGAEP38570 1179 aa15.26■□□□□ 0.03
LSM14A-206ENST00000588582 RANGAP1P46060 587 aaPredicted RBP15.26■□□□□ 0.03
LSM14A-206ENST00000588582 FKBP8Q14318 412 aa15.24■□□□□ 0.03
LSM14A-206ENST00000588582 APLP2Q06481 763 aa15.12■□□□□ 0.01
LSM14A-206ENST00000588582 NBR1Q14596 966 aa15.12■□□□□ 0.01
LSM14A-206ENST00000588582 UBTFP17480 764 aaKnown RBP15.12■□□□□ 0.01
LSM14A-206ENST00000588582 RTN4Q9NQC3 1192 aaKnown RBP15.09■□□□□ 0.01
LSM14A-206ENST00000588582 EIF5BO60841 1220 aaKnown RBP15.09■□□□□ 0.01
LSM14A-206ENST00000588582 CCDC136Q96JN2 1154 aa15.07■□□□□ 0
LSM14A-206ENST00000588582 RBM19Q9Y4C8 960 aaKnown RBP15.05■□□□□ -0
LSM14A-206ENST00000588582 RTL5Q5HYW3 569 aaPredicted RBP15.02□□□□□ -0.01
LSM14A-206ENST00000588582 ANO8Q9HCE9 1232 aaPredicted RBP15.02□□□□□ -0.01
LSM14A-206ENST00000588582 CDK11AQ9UQ88 783 aaPredicted RBP14.99□□□□□ -0.01
LSM14A-206ENST00000588582 IRX6P78412 446 aaPredicted RBP14.98□□□□□ -0.01
LSM14A-206ENST00000588582 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.98□□□□□ -0.01
LSM14A-206ENST00000588582 CLSPNQ9HAW4 1339 aa14.97□□□□□ -0.01
LSM14A-206ENST00000588582 DEKP35659 375 aaKnown RBP14.97□□□□□ -0.01
LSM14A-206ENST00000588582 TRIM52Q96A61 297 aa14.96□□□□□ -0.01
LSM14A-206ENST00000588582 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
LSM14A-206ENST00000588582 CNGB1Q14028 1251 aaPredicted RBP14.82□□□□□ -0.04
LSM14A-206ENST00000588582 SALL2Q9Y467 1007 aaPredicted RBP14.8□□□□□ -0.04
LSM14A-206ENST00000588582 DDX10Q13206 875 aaKnown RBP14.8□□□□□ -0.04
LSM14A-206ENST00000588582 HIRIP3Q9BW71 556 aaPredicted RBP14.73□□□□□ -0.05
LSM14A-206ENST00000588582 NPM2Q86SE8 214 aaKnown RBP14.73□□□□□ -0.05
LSM14A-206ENST00000588582 MYT1LQ9UL68 1186 aa14.72□□□□□ -0.05
LSM14A-206ENST00000588582 MSH5O43196 834 aa14.69□□□□□ -0.06
LSM14A-206ENST00000588582 SLC24A1O60721 1099 aa14.67□□□□□ -0.06
LSM14A-206ENST00000588582 ANP32CO43423 234 aa14.66□□□□□ -0.06
LSM14A-206ENST00000588582 HNRNPUQ00839 825 aaKnown RBP eCLIP14.65□□□□□ -0.06
LSM14A-206ENST00000588582 ANP32AP39687 249 aaKnown RBP14.64□□□□□ -0.07
LSM14A-206ENST00000588582 IL27Q8NEV9 243 aa14.6□□□□□ -0.07
LSM14A-206ENST00000588582 ZBTB47Q9UFB7 747 aaPredicted RBP14.59□□□□□ -0.07
LSM14A-206ENST00000588582 NOP58Q9Y2X3 529 aaKnown RBP14.59□□□□□ -0.07
LSM14A-206ENST00000588582 B4GALNT3Q6L9W6 998 aa14.56□□□□□ -0.08
LSM14A-206ENST00000588582 LAS1LQ9Y4W2 734 aaKnown RBP14.56□□□□□ -0.08
LSM14A-206ENST00000588582 DAXXQ9UER7 740 aaPredicted RBP14.55□□□□□ -0.08
LSM14A-206ENST00000588582 SENP3-EIF4A1A0A087X0R7 540 aa14.53□□□□□ -0.08
LSM14A-206ENST00000588582 ATP1B4Q9UN42 357 aaPredicted RBP14.51□□□□□ -0.09
LSM14A-206ENST00000588582 POLR3GLQ9BT43 218 aa14.48□□□□□ -0.09
LSM14A-206ENST00000588582 ZCCHC6Q5VYS8 1495 aaKnown RBP14.47□□□□□ -0.09
LSM14A-206ENST00000588582 TIMELESSQ9UNS1 1208 aa14.47□□□□□ -0.09
LSM14A-206ENST00000588582 NEFMP07197 916 aa14.46□□□□□ -0.1
LSM14A-206ENST00000588582 ARXQ96QS3 562 aa14.45□□□□□ -0.1
LSM14A-206ENST00000588582 FAM9BQ8IZU0 186 aa14.44□□□□□ -0.1
LSM14A-206ENST00000588582 FANCIQ9NVI1 1328 aa14.44□□□□□ -0.1
LSM14A-206ENST00000588582 PAK3O75914 559 aaPredicted RBP14.42□□□□□ -0.1
LSM14A-206ENST00000588582 ERICH6BQ5W0A0 696 aa14.41□□□□□ -0.1
LSM14A-206ENST00000588582 CEP162Q5TB80 1403 aa14.41□□□□□ -0.1
LSM14A-206ENST00000588582 GLIPR1L2Q4G1C9 344 aa14.39□□□□□ -0.11
LSM14A-206ENST00000588582 PPP4R2Q9NY27 417 aa14.35□□□□□ -0.11
LSM14A-206ENST00000588582 PKNOX2Q96KN3 472 aa14.33□□□□□ -0.11
LSM14A-206ENST00000588582 FAM50AQ14320 339 aaKnown RBP14.32□□□□□ -0.12
LSM14A-206ENST00000588582 UBE2Q2Q8WVN8 375 aa14.3□□□□□ -0.12
LSM14A-206ENST00000588582 VSIG10Q8N0Z9 540 aa14.3□□□□□ -0.12
LSM14A-206ENST00000588582 SIN3AQ96ST3 1273 aa14.29□□□□□ -0.12
LSM14A-206ENST00000588582 BRPF3Q9ULD4 1205 aa14.28□□□□□ -0.12
LSM14A-206ENST00000588582 ARID4BQ4LE39 1312 aaPredicted RBP14.28□□□□□ -0.12
LSM14A-206ENST00000588582 IPO9Q96P70 1041 aaKnown RBP14.24□□□□□ -0.13
LSM14A-206ENST00000588582 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms