RNA–Protein interactions for RNA: ENST00000582469.1

SMG8-206, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 1,144 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-206ENST00000582469 CRIPTQ9P021 101 aa2.32□□□□□ -2.04
SMG8-206ENST00000582469 DNAH10Q8IVF4 4471 aa2.32□□□□□ -2.04
SMG8-206ENST00000582469 TRRAPQ9Y4A5 3859 aa2.32□□□□□ -2.04
SMG8-206ENST00000582469 FBN1P35555 2871 aaKnown RBP2.31□□□□□ -2.04
SMG8-206ENST00000582469 LRRK2Q5S007 2527 aa2.31□□□□□ -2.04
SMG8-206ENST00000582469 PDZD2O15018 2839 aa2.31□□□□□ -2.04
SMG8-206ENST00000582469 FBN3Q75N90 2809 aa2.31□□□□□ -2.04
SMG8-206ENST00000582469 CUBNO60494 3623 aa2.31□□□□□ -2.04
SMG8-206ENST00000582469 ANK2Q01484 3957 aa2.3□□□□□ -2.04
SMG8-206ENST00000582469 DNAH3Q8TD57 4116 aa2.3□□□□□ -2.04
SMG8-206ENST00000582469 USP24Q9UPU5 2620 aa2.3□□□□□ -2.04
SMG8-206ENST00000582469 DNAH9Q9NYC9 4486 aa2.3□□□□□ -2.04
SMG8-206ENST00000582469 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
SMG8-206ENST00000582469 SMR3AQ99954 134 aa2.3□□□□□ -2.04
SMG8-206ENST00000582469 ZNF462Q96JM2 2506 aa2.3□□□□□ -2.04
SMG8-206ENST00000582469 TEP1Q99973 2627 aaKnown RBP2.3□□□□□ -2.04
SMG8-206ENST00000582469 LYSTQ99698 3801 aa2.29□□□□□ -2.04
SMG8-206ENST00000582469 PKD1L1Q8TDX9 2849 aa2.29□□□□□ -2.04
SMG8-206ENST00000582469 IGSF10Q6WRI0 2623 aa2.29□□□□□ -2.04
SMG8-206ENST00000582469 HECTD1Q9ULT8 2610 aa2.29□□□□□ -2.04
SMG8-206ENST00000582469 POLQO75417 2590 aa2.29□□□□□ -2.04
SMG8-206ENST00000582469 FRAS1Q86XX4 4008 aa2.28□□□□□ -2.04
SMG8-206ENST00000582469 FLNAP21333 2647 aaKnown RBP2.27□□□□□ -2.05
SMG8-206ENST00000582469 ZNF469Q96JG9 3925 aaPredicted RBP2.26□□□□□ -2.05
SMG8-206ENST00000582469 SETD2Q9BYW2 2564 aaPredicted RBP2.26□□□□□ -2.05
SMG8-206ENST00000582469 MTORP42345 2549 aa2.26□□□□□ -2.05
SMG8-206ENST00000582469 TENM1Q9UKZ4 2725 aa2.25□□□□□ -2.05
SMG8-206ENST00000582469 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
SMG8-206ENST00000582469 HUWE1Q7Z6Z7 4374 aaKnown RBP2.25□□□□□ -2.05
SMG8-206ENST00000582469 CCDC168Q8NDH2 2452 aa2.25□□□□□ -2.05
SMG8-206ENST00000582469 F8P00451 2351 aa2.24□□□□□ -2.05
SMG8-206ENST00000582469 MYO18BQ8IUG5 2567 aa2.24□□□□□ -2.05
SMG8-206ENST00000582469 S4R3F8 94 aa2.24□□□□□ -2.05
SMG8-206ENST00000582469 FASNP49327 2511 aaKnown RBP2.24□□□□□ -2.05
SMG8-206ENST00000582469 TENM3Q9P273 2699 aa2.24□□□□□ -2.05
SMG8-206ENST00000582469 PRKDCP78527 4128 aaKnown RBP2.23□□□□□ -2.05
SMG8-206ENST00000582469 MEGF8Q7Z7M0 2845 aa2.23□□□□□ -2.05
SMG8-206ENST00000582469 C10orf95Q9H7T3 257 aa2.23□□□□□ -2.05
SMG8-206ENST00000582469 ABCA12Q86UK0 2595 aa2.23□□□□□ -2.05
SMG8-206ENST00000582469 ACACBO00763 2458 aa2.23□□□□□ -2.05
SMG8-206ENST00000582469 SONP18583 2426 aaKnown RBP2.22□□□□□ -2.05
SMG8-206ENST00000582469 KRTAP13-4Q3LI77 160 aa2.22□□□□□ -2.05
SMG8-206ENST00000582469 CSMD3Q7Z407 3707 aa2.21□□□□□ -2.06
SMG8-206ENST00000582469 J3QKU1 62 aa2.21□□□□□ -2.06
SMG8-206ENST00000582469 DNAH2Q9P225 4427 aa2.21□□□□□ -2.06
SMG8-206ENST00000582469 COL7A1Q02388 2944 aa2.21□□□□□ -2.06
SMG8-206ENST00000582469 DNAH7Q8WXX0 4024 aa2.2□□□□□ -2.06
SMG8-206ENST00000582469 HECTD4Q9Y4D8 3996 aa2.2□□□□□ -2.06
SMG8-206ENST00000582469 HELZ2Q9BYK8 2649 aaKnown RBP2.2□□□□□ -2.06
SMG8-206ENST00000582469 CMYA5Q8N3K9 4069 aa2.2□□□□□ -2.06
SMG8-206ENST00000582469 PLECQ15149 4684 aaKnown RBP2.19□□□□□ -2.06
SMG8-206ENST00000582469 A0A0D9SG42 100 aa2.19□□□□□ -2.06
SMG8-206ENST00000582469 M0QZ58 72 aa2.19□□□□□ -2.06
SMG8-206ENST00000582469 KRTAP12-1P59990 96 aa2.19□□□□□ -2.06
SMG8-206ENST00000582469 DNAH6Q9C0G6 4158 aa2.19□□□□□ -2.06
SMG8-206ENST00000582469 FAM208BQ5VWN6 2430 aa2.18□□□□□ -2.06
SMG8-206ENST00000582469 PLAC4Q8WY50 150 aa2.18□□□□□ -2.06
SMG8-206ENST00000582469 SACSQ9NZJ4 4579 aa2.17□□□□□ -2.06
SMG8-206ENST00000582469 DNAH11Q96DT5 4516 aa2.17□□□□□ -2.06
SMG8-206ENST00000582469 NBEAL1Q6ZS30 2694 aa2.17□□□□□ -2.06
SMG8-206ENST00000582469 DNHD1Q96M86 4753 aa2.16□□□□□ -2.06
SMG8-206ENST00000582469 TGP01266 2768 aa2.16□□□□□ -2.06
SMG8-206ENST00000582469 NSD1Q96L73 2696 aaPredicted RBP2.15□□□□□ -2.06
SMG8-206ENST00000582469 LRP1BQ9NZR2 4599 aa2.13□□□□□ -2.07
SMG8-206ENST00000582469 ATRQ13535 2644 aa2.13□□□□□ -2.07
SMG8-206ENST00000582469 ITPR2Q14571 2701 aa2.13□□□□□ -2.07
SMG8-206ENST00000582469 FLG2Q5D862 2391 aaPredicted RBP2.13□□□□□ -2.07
SMG8-206ENST00000582469 C9orf92A6NGG3 77 aa2.12□□□□□ -2.07
SMG8-206ENST00000582469 ACANP16112 2415 aa2.12□□□□□ -2.07
SMG8-206ENST00000582469 MYCBP2O75592 4640 aa2.12□□□□□ -2.07
SMG8-206ENST00000582469 UBR4Q5T4S7 5183 aa2.12□□□□□ -2.07
SMG8-206ENST00000582469 DNAH5Q8TE73 4624 aa2.11□□□□□ -2.07
SMG8-206ENST00000582469 PCLOQ9Y6V0 5065 aa2.1□□□□□ -2.07
SMG8-206ENST00000582469 KMT2AQ03164 3969 aa2.08□□□□□ -2.08
SMG8-206ENST00000582469 NOTCH1P46531 2555 aa2.07□□□□□ -2.08
SMG8-206ENST00000582469 PRO2289Q9P1D8 64 aa2.07□□□□□ -2.08
SMG8-206ENST00000582469 STARD9Q9P2P6 4700 aa2.06□□□□□ -2.08
SMG8-206ENST00000582469 PKHD1L1Q86WI1 4243 aa2.06□□□□□ -2.08
SMG8-206ENST00000582469 PKD1P98161 4303 aa2.05□□□□□ -2.08
SMG8-206ENST00000582469 STAB2Q8WWQ8 2551 aa2.04□□□□□ -2.08
SMG8-206ENST00000582469 INE1O15225 51 aa2.04□□□□□ -2.08
SMG8-206ENST00000582469 DYNC1H1Q14204 4646 aaKnown RBP2.03□□□□□ -2.08
SMG8-206ENST00000582469 LRP1Q07954 4544 aaKnown RBP2.03□□□□□ -2.08
SMG8-206ENST00000582469 COL6A5A8TX70 2615 aa2.03□□□□□ -2.09
SMG8-206ENST00000582469 APOBP04114 4563 aaKnown RBP2.02□□□□□ -2.09
SMG8-206ENST00000582469 FAT3Q8TDW7 4589 aa2.02□□□□□ -2.09
SMG8-206ENST00000582469 PKHD1P08F94 4074 aa2.01□□□□□ -2.09
SMG8-206ENST00000582469 KRTAP21-3Q3LHN1 58 aa2.01□□□□□ -2.09
SMG8-206ENST00000582469 VPS13BQ7Z7G8 4022 aa2□□□□□ -2.09
SMG8-206ENST00000582469 KRTAP10-4P60372 401 aaPredicted RBP2□□□□□ -2.09
SMG8-206ENST00000582469 RYR1P21817 5038 aa2□□□□□ -2.09
SMG8-206ENST00000582469 FAT2Q9NYQ8 4349 aa2□□□□□ -2.09
SMG8-206ENST00000582469 HSPG2P98160 4391 aa1.99□□□□□ -2.09
SMG8-206ENST00000582469 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
SMG8-206ENST00000582469 TNXBP22105 4242 aa1.99□□□□□ -2.09
SMG8-206ENST00000582469 STAB1Q9NY15 2570 aa1.97□□□□□ -2.09
SMG8-206ENST00000582469 FAT1Q14517 4588 aa1.97□□□□□ -2.09
SMG8-206ENST00000582469 MGAM2Q2M2H8 2515 aa1.95□□□□□ -2.1
SMG8-206ENST00000582469 Q5VSD8 79 aa1.94□□□□□ -2.1
SMG8-206ENST00000582469 TNP1P09430 55 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms