RNA–Protein interactions for RNA: ENST00000582469.1

SMG8-206, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 1,144 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-206ENST00000582469 AEBP2Q6ZN18 517 aaPredicted RBP26.73■■□□□ 1.87
SMG8-206ENST00000582469 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
SMG8-206ENST00000582469 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
SMG8-206ENST00000582469 SENP3Q9H4L4 574 aaPredicted RBP22.63■■□□□ 1.21
SMG8-206ENST00000582469 PLPPR3Q6T4P5 718 aa21.54■■□□□ 1.04
SMG8-206ENST00000582469 FOXD1Q16676 465 aa20.97■□□□□ 0.95
SMG8-206ENST00000582469 PPP6R1Q9UPN7 881 aa20.39■□□□□ 0.85
SMG8-206ENST00000582469 ADRA2BP18089 450 aa20.35■□□□□ 0.85
SMG8-206ENST00000582469 PIAS4Q8N2W9 510 aaPredicted RBP19.79■□□□□ 0.76
SMG8-206ENST00000582469 MSH5O43196 834 aa19.23■□□□□ 0.67
SMG8-206ENST00000582469 PPP4R3CPQ6ZMV5 832 aa19■□□□□ 0.63
SMG8-206ENST00000582469 KCNA4P22459 653 aa18.87■□□□□ 0.61
SMG8-206ENST00000582469 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
SMG8-206ENST00000582469 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
SMG8-206ENST00000582469 CNKSR2Q8WXI2 1034 aa18.43■□□□□ 0.54
SMG8-206ENST00000582469 MAPK8IP2Q13387 824 aaPredicted RBP18.38■□□□□ 0.53
SMG8-206ENST00000582469 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
SMG8-206ENST00000582469 POTEDQ86YR6 584 aa18.3■□□□□ 0.52
SMG8-206ENST00000582469 DMRT2Q9Y5R5 561 aa18.13■□□□□ 0.49
SMG8-206ENST00000582469 RNF216Q9NWF9 866 aaPredicted RBP18.02■□□□□ 0.48
SMG8-206ENST00000582469 SLC4A1APQ9BWU0 796 aaKnown RBP18.01■□□□□ 0.47
SMG8-206ENST00000582469 DNAJC5BQ9UF47 199 aa17.92■□□□□ 0.46
SMG8-206ENST00000582469 HOXD11P31277 338 aaPredicted RBP17.9■□□□□ 0.46
SMG8-206ENST00000582469 EHMT2Q96KQ7 1210 aa17.74■□□□□ 0.43
SMG8-206ENST00000582469 CSRNP3Q8WYN3 585 aa17.53■□□□□ 0.4
SMG8-206ENST00000582469 ZBTB22O15209 634 aa17.39■□□□□ 0.37
SMG8-206ENST00000582469 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
SMG8-206ENST00000582469 SLC4A2P04920 1241 aa17.26■□□□□ 0.35
SMG8-206ENST00000582469 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
SMG8-206ENST00000582469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMG8-206ENST00000582469 MYCNP04198 464 aaPredicted RBP16.93■□□□□ 0.3
SMG8-206ENST00000582469 U3KPZ7 1027 aaPredicted RBP16.77■□□□□ 0.28
SMG8-206ENST00000582469 ATXN8OSP0DMR3 200 aa16.73■□□□□ 0.27
SMG8-206ENST00000582469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
SMG8-206ENST00000582469 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
SMG8-206ENST00000582469 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
SMG8-206ENST00000582469 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
SMG8-206ENST00000582469 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
SMG8-206ENST00000582469 APLP2Q06481 763 aa16.4■□□□□ 0.22
SMG8-206ENST00000582469 C1QBPQ07021 282 aaKnown RBP16.34■□□□□ 0.21
SMG8-206ENST00000582469 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
SMG8-206ENST00000582469 SPINK5Q9NQ38 1064 aaPredicted RBP16.17■□□□□ 0.18
SMG8-206ENST00000582469 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
SMG8-206ENST00000582469 CAPN15O75808 1086 aa16.05■□□□□ 0.16
SMG8-206ENST00000582469 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
SMG8-206ENST00000582469 POLA2Q14181 598 aa15.89■□□□□ 0.13
SMG8-206ENST00000582469 DSG3P32926 999 aa15.8■□□□□ 0.12
SMG8-206ENST00000582469 MKRN4PQ13434 485 aaPredicted RBP15.77■□□□□ 0.12
SMG8-206ENST00000582469 ABCB7O75027 752 aa15.76■□□□□ 0.11
SMG8-206ENST00000582469 FKBP8Q14318 412 aa15.76■□□□□ 0.11
SMG8-206ENST00000582469 FBLN2P98095 1184 aa15.7■□□□□ 0.1
SMG8-206ENST00000582469 ZBTB12Q9Y330 459 aaPredicted RBP15.69■□□□□ 0.1
SMG8-206ENST00000582469 SPDYE4A6NLX3 237 aa15.51■□□□□ 0.07
SMG8-206ENST00000582469 PROM2Q8N271 834 aa15.41■□□□□ 0.06
SMG8-206ENST00000582469 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
SMG8-206ENST00000582469 SPDYE2BA6NHP3 402 aa15.29■□□□□ 0.04
SMG8-206ENST00000582469 SPDYE6P0CI01 402 aa15.29■□□□□ 0.04
SMG8-206ENST00000582469 SPDYE2Q495Y8 402 aa15.29■□□□□ 0.04
SMG8-206ENST00000582469 SSUH2Q9Y2M2 353 aa15.24■□□□□ 0.03
SMG8-206ENST00000582469 ZNF692Q9BU19 519 aaPredicted RBP15.23■□□□□ 0.03
SMG8-206ENST00000582469 FBXO3Q9UK99 471 aa15.17■□□□□ 0.02
SMG8-206ENST00000582469 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
SMG8-206ENST00000582469 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
SMG8-206ENST00000582469 VASPP50552 380 aaPredicted RBP14.95□□□□□ -0.02
SMG8-206ENST00000582469 AKT1S1Q96B36 256 aa14.93□□□□□ -0.02
SMG8-206ENST00000582469 AMER1Q5JTC6 1135 aaPredicted RBP14.91□□□□□ -0.02
SMG8-206ENST00000582469 STAG3Q9UJ98 1225 aa14.9□□□□□ -0.02
SMG8-206ENST00000582469 RTN4Q9NQC3 1192 aaKnown RBP14.85□□□□□ -0.03
SMG8-206ENST00000582469 IFNLR1Q8IU57 520 aaPredicted RBP14.78□□□□□ -0.04
SMG8-206ENST00000582469 REM2Q8IYK8 340 aaPredicted RBP14.77□□□□□ -0.05
SMG8-206ENST00000582469 SPDYE1Q8NFV5 336 aaPredicted RBP14.75□□□□□ -0.05
SMG8-206ENST00000582469 MIER1Q8N108 512 aa14.64□□□□□ -0.07
SMG8-206ENST00000582469 PLCD3Q8N3E9 789 aa14.63□□□□□ -0.07
SMG8-206ENST00000582469 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
SMG8-206ENST00000582469 PITPNM1O00562 1244 aa14.58□□□□□ -0.08
SMG8-206ENST00000582469 PRR29P0C7W0 189 aa14.55□□□□□ -0.08
SMG8-206ENST00000582469 KLHL34Q8N239 644 aa14.55□□□□□ -0.08
SMG8-206ENST00000582469 SPOCK2Q92563 424 aa14.55□□□□□ -0.08
SMG8-206ENST00000582469 PLEKHG5O94827 1062 aa14.54□□□□□ -0.08
SMG8-206ENST00000582469 ZBTB47Q9UFB7 747 aaPredicted RBP14.52□□□□□ -0.09
SMG8-206ENST00000582469 CREBZFQ9NS37 354 aa14.48□□□□□ -0.09
SMG8-206ENST00000582469 MNX1P50219 401 aaPredicted RBP14.41□□□□□ -0.1
SMG8-206ENST00000582469 PKD2Q13563 968 aa14.41□□□□□ -0.1
SMG8-206ENST00000582469 POTEHQ6S545 545 aa14.38□□□□□ -0.11
SMG8-206ENST00000582469 NUBP1P53384 320 aa14.32□□□□□ -0.12
SMG8-206ENST00000582469 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.12
SMG8-206ENST00000582469 CHRDL2Q6WN34 429 aa14.28□□□□□ -0.12
SMG8-206ENST00000582469 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
SMG8-206ENST00000582469 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
SMG8-206ENST00000582469 GSE1Q14687 1217 aa14.21□□□□□ -0.13
SMG8-206ENST00000582469 ECM2O94769 699 aaPredicted RBP14.2□□□□□ -0.14
SMG8-206ENST00000582469 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
SMG8-206ENST00000582469 CIZ1Q9ULV3 898 aaPredicted RBP14.2□□□□□ -0.14
SMG8-206ENST00000582469 TRIM41Q8WV44 630 aa14.19□□□□□ -0.14
SMG8-206ENST00000582469 FARP1Q9Y4F1 1045 aaPredicted RBP14.18□□□□□ -0.14
SMG8-206ENST00000582469 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
SMG8-206ENST00000582469 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
SMG8-206ENST00000582469 FAM212AQ96EL1 285 aa14.14□□□□□ -0.15
SMG8-206ENST00000582469 DCAF8Q5TAQ9 597 aa14.12□□□□□ -0.15
SMG8-206ENST00000582469 RGL2O15211 777 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms