RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 A6NN06 94 aa4.22□□□□□ -1.73
CFDP1-202ENST00000562602 SEC61GP60059 68 aa4.22□□□□□ -1.73
CFDP1-202ENST00000562602 C7orf65Q6ZTY9 151 aa4.22□□□□□ -1.73
CFDP1-202ENST00000562602 A8MU10 97 aa4.21□□□□□ -1.74
CFDP1-202ENST00000562602 LINC00304Q8N9R0 145 aa4.21□□□□□ -1.74
CFDP1-202ENST00000562602 KMT2AQ03164 3969 aa4.21□□□□□ -1.74
CFDP1-202ENST00000562602 HERC2O95714 4834 aa4.2□□□□□ -1.74
CFDP1-202ENST00000562602 UQCR11O14957 56 aa4.2□□□□□ -1.74
CFDP1-202ENST00000562602 SPINK7P58062 85 aa4.2□□□□□ -1.74
CFDP1-202ENST00000562602 SPATA8Q6RVD6 105 aa4.19□□□□□ -1.74
CFDP1-202ENST00000562602 RETNLBQ9BQ08 111 aa4.19□□□□□ -1.74
CFDP1-202ENST00000562602 PCLOQ9Y6V0 5065 aa4.17□□□□□ -1.74
CFDP1-202ENST00000562602 DNAH5Q8TE73 4624 aa4.16□□□□□ -1.74
CFDP1-202ENST00000562602 RYR1P21817 5038 aa4.15□□□□□ -1.74
CFDP1-202ENST00000562602 MIR22HGQ0VDD5 57 aa4.15□□□□□ -1.75
CFDP1-202ENST00000562602 A8MUU9 505 aa4.14□□□□□ -1.75
CFDP1-202ENST00000562602 C20orf166-AS1Q96NR2 134 aa4.14□□□□□ -1.75
CFDP1-202ENST00000562602 PKHD1P08F94 4074 aa4.12□□□□□ -1.75
CFDP1-202ENST00000562602 FAT2Q9NYQ8 4349 aa4.12□□□□□ -1.75
CFDP1-202ENST00000562602 KIAA1109Q2LD37 5005 aa4.11□□□□□ -1.75
CFDP1-202ENST00000562602 PKD1P98161 4303 aa4.1□□□□□ -1.75
CFDP1-202ENST00000562602 LRP1BQ9NZR2 4599 aa4.09□□□□□ -1.75
CFDP1-202ENST00000562602 RBM12B-AS1Q9P1G2 102 aa4.09□□□□□ -1.75
CFDP1-202ENST00000562602 DYNC1H1Q14204 4646 aaKnown RBP4.07□□□□□ -1.76
CFDP1-202ENST00000562602 ABCA13Q86UQ4 5058 aa4.06□□□□□ -1.76
CFDP1-202ENST00000562602 A0A1B0GVY2 172 aa4.06□□□□□ -1.76
CFDP1-202ENST00000562602 VPS13BQ7Z7G8 4022 aa4.04□□□□□ -1.76
CFDP1-202ENST00000562602 C9orf92A6NGG3 77 aa4.02□□□□□ -1.77
CFDP1-202ENST00000562602 SMR3BP02814 79 aaPredicted RBP4.02□□□□□ -1.77
CFDP1-202ENST00000562602 KRTAP10-4P60372 401 aaPredicted RBP4.02□□□□□ -1.77
CFDP1-202ENST00000562602 COX6B2Q6YFQ2 88 aa4.02□□□□□ -1.77
CFDP1-202ENST00000562602 HSPG2P98160 4391 aa4□□□□□ -1.77
CFDP1-202ENST00000562602 A0A1B0GU33 70 aa4□□□□□ -1.77
CFDP1-202ENST00000562602 K7ERS5 55 aa4□□□□□ -1.77
CFDP1-202ENST00000562602 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
CFDP1-202ENST00000562602 PKHD1L1Q86WI1 4243 aa3.99□□□□□ -1.77
CFDP1-202ENST00000562602 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
CFDP1-202ENST00000562602 H1FX-AS1Q4G0G2 97 aa3.98□□□□□ -1.77
CFDP1-202ENST00000562602 APOBP04114 4563 aaKnown RBP3.97□□□□□ -1.77
CFDP1-202ENST00000562602 HERC1Q15751 4861 aa3.96□□□□□ -1.78
CFDP1-202ENST00000562602 KRTAP10-7P60409 375 aaPredicted RBP3.95□□□□□ -1.78
CFDP1-202ENST00000562602 KRTAP10-8P60410 259 aa3.95□□□□□ -1.78
CFDP1-202ENST00000562602 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
CFDP1-202ENST00000562602 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
CFDP1-202ENST00000562602 H0YAA0 97 aa3.93□□□□□ -1.78
CFDP1-202ENST00000562602 KRTAP10-6P60371 365 aaPredicted RBP3.93□□□□□ -1.78
CFDP1-202ENST00000562602 RPL37P61927 97 aaKnown RBP3.93□□□□□ -1.78
CFDP1-202ENST00000562602 LINC01554Q52M75 96 aa3.93□□□□□ -1.78
CFDP1-202ENST00000562602 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
CFDP1-202ENST00000562602 ADM2Q7Z4H4 148 aa3.9□□□□□ -1.79
CFDP1-202ENST00000562602 Q5VSD8 79 aa3.88□□□□□ -1.79
CFDP1-202ENST00000562602 FAT1Q14517 4588 aa3.88□□□□□ -1.79
CFDP1-202ENST00000562602 CSAG1Q6PB30 78 aa3.87□□□□□ -1.79
CFDP1-202ENST00000562602 S4R3F8 94 aa3.87□□□□□ -1.79
CFDP1-202ENST00000562602 MYCBP2O75592 4640 aa3.86□□□□□ -1.79
CFDP1-202ENST00000562602 FLG2Q5D862 2391 aaPredicted RBP3.84□□□□□ -1.79
CFDP1-202ENST00000562602 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
CFDP1-202ENST00000562602 ROMO1P60602 79 aa3.81□□□□□ -1.8
CFDP1-202ENST00000562602 TNXBP22105 4242 aa3.79□□□□□ -1.8
CFDP1-202ENST00000562602 TPRXLQ17RH7 258 aa3.79□□□□□ -1.8
CFDP1-202ENST00000562602 FAT3Q8TDW7 4589 aa3.77□□□□□ -1.81
CFDP1-202ENST00000562602 M0QZ58 72 aa3.76□□□□□ -1.81
CFDP1-202ENST00000562602 MT1HL1P0DM35 61 aa3.75□□□□□ -1.81
CFDP1-202ENST00000562602 HMCN2Q8NDA2 5059 aa3.75□□□□□ -1.81
CFDP1-202ENST00000562602 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
CFDP1-202ENST00000562602 DMBT1Q9UGM3 2413 aaPredicted RBP3.74□□□□□ -1.81
CFDP1-202ENST00000562602 UBR4Q5T4S7 5183 aa3.74□□□□□ -1.81
CFDP1-202ENST00000562602 LRP1Q07954 4544 aaKnown RBP3.72□□□□□ -1.81
CFDP1-202ENST00000562602 A0A0D9SG42 100 aa3.7□□□□□ -1.82
CFDP1-202ENST00000562602 P0C880 135 aa3.69□□□□□ -1.82
CFDP1-202ENST00000562602 SEC61BP60468 96 aaKnown RBP3.69□□□□□ -1.82
CFDP1-202ENST00000562602 KRTAP13-4Q3LI77 160 aa3.69□□□□□ -1.82
CFDP1-202ENST00000562602 CRIPTQ9P021 101 aa3.69□□□□□ -1.82
CFDP1-202ENST00000562602 KRTAP12-1P59990 96 aa3.63□□□□□ -1.83
CFDP1-202ENST00000562602 SPINT4Q6UDR6 99 aa3.63□□□□□ -1.83
CFDP1-202ENST00000562602 KRTAP12-2P59991 146 aa3.61□□□□□ -1.83
CFDP1-202ENST00000562602 RNF213Q63HN8 5207 aa3.61□□□□□ -1.83
CFDP1-202ENST00000562602 LRP2P98164 4655 aa3.6□□□□□ -1.83
CFDP1-202ENST00000562602 R4GN34 69 aa3.59□□□□□ -1.83
CFDP1-202ENST00000562602 MT3P25713 68 aa3.51□□□□□ -1.85
CFDP1-202ENST00000562602 C10orf95Q9H7T3 257 aa3.51□□□□□ -1.85
CFDP1-202ENST00000562602 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
CFDP1-202ENST00000562602 LPAP08519 4548 aa3.49□□□□□ -1.85
CFDP1-202ENST00000562602 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
CFDP1-202ENST00000562602 MUC2Q02817 5179 aa3.43□□□□□ -1.86
CFDP1-202ENST00000562602 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
CFDP1-202ENST00000562602 MUC17Q685J3 4493 aa3.42□□□□□ -1.86
CFDP1-202ENST00000562602 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
CFDP1-202ENST00000562602 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
CFDP1-202ENST00000562602 KRTAP19-2Q3LHN2 52 aa3.4□□□□□ -1.87
CFDP1-202ENST00000562602 PLAC4Q8WY50 150 aa3.36□□□□□ -1.87
CFDP1-202ENST00000562602 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
CFDP1-202ENST00000562602 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
CFDP1-202ENST00000562602 FAT4Q6V0I7 4981 aa3.34□□□□□ -1.88
CFDP1-202ENST00000562602 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
CFDP1-202ENST00000562602 TNP1P09430 55 aa3.32□□□□□ -1.88
CFDP1-202ENST00000562602 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
CFDP1-202ENST00000562602 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
CFDP1-202ENST00000562602 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
CFDP1-202ENST00000562602 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms