RNA–Protein interactions for RNA: ENST00000561603.5

RPAP1-202, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 5 BASIC

Gene RPAP1, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-202ENST00000561603 M0QZ58 72 aa4.79□□□□□ -1.64
RPAP1-202ENST00000561603 VPS13BQ7Z7G8 4022 aa4.79□□□□□ -1.64
RPAP1-202ENST00000561603 C20orf166-AS1Q96NR2 134 aa4.78□□□□□ -1.64
RPAP1-202ENST00000561603 LRP1Q07954 4544 aaKnown RBP4.77□□□□□ -1.65
RPAP1-202ENST00000561603 KRTAP10-8P60410 259 aa4.77□□□□□ -1.65
RPAP1-202ENST00000561603 PKHD1P08F94 4074 aa4.75□□□□□ -1.65
RPAP1-202ENST00000561603 A8MUU9 505 aa4.75□□□□□ -1.65
RPAP1-202ENST00000561603 RPS29P62273 56 aaKnown RBP4.74□□□□□ -1.65
RPAP1-202ENST00000561603 ALMS1Q8TCU4 4167 aa4.73□□□□□ -1.65
RPAP1-202ENST00000561603 SACSQ9NZJ4 4579 aa4.71□□□□□ -1.66
RPAP1-202ENST00000561603 H1FX-AS1Q4G0G2 97 aa4.71□□□□□ -1.66
RPAP1-202ENST00000561603 APOBP04114 4563 aaKnown RBP4.68□□□□□ -1.66
RPAP1-202ENST00000561603 MT1HL1P0DM35 61 aa4.65□□□□□ -1.66
RPAP1-202ENST00000561603 KRTAP10-4P60372 401 aaPredicted RBP4.65□□□□□ -1.66
RPAP1-202ENST00000561603 FAT2Q9NYQ8 4349 aa4.64□□□□□ -1.67
RPAP1-202ENST00000561603 PKD1P98161 4303 aa4.62□□□□□ -1.67
RPAP1-202ENST00000561603 KRTAP17-1Q9BYP8 105 aa4.61□□□□□ -1.67
RPAP1-202ENST00000561603 P0C880 135 aa4.61□□□□□ -1.67
RPAP1-202ENST00000561603 TPRXLQ17RH7 258 aa4.61□□□□□ -1.67
RPAP1-202ENST00000561603 PCLOQ9Y6V0 5065 aa4.59□□□□□ -1.67
RPAP1-202ENST00000561603 HERC2O95714 4834 aa4.57□□□□□ -1.68
RPAP1-202ENST00000561603 ROMO1P60602 79 aa4.57□□□□□ -1.68
RPAP1-202ENST00000561603 EPPK1P58107 5090 aaKnown RBP4.57□□□□□ -1.68
RPAP1-202ENST00000561603 LRP2P98164 4655 aa4.57□□□□□ -1.68
RPAP1-202ENST00000561603 RYR2Q92736 4967 aa4.56□□□□□ -1.68
RPAP1-202ENST00000561603 H0YAA0 97 aa4.55□□□□□ -1.68
RPAP1-202ENST00000561603 KRTAP3-1Q9BYR8 98 aa4.54□□□□□ -1.68
RPAP1-202ENST00000561603 KRTAP10-10P60014 251 aa4.53□□□□□ -1.68
RPAP1-202ENST00000561603 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
RPAP1-202ENST00000561603 PLAC4Q8WY50 150 aa4.48□□□□□ -1.69
RPAP1-202ENST00000561603 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
RPAP1-202ENST00000561603 FSIP2Q5CZC0 6907 aa4.45□□□□□ -1.7
RPAP1-202ENST00000561603 LUZP6Q538Z0 58 aa4.45□□□□□ -1.7
RPAP1-202ENST00000561603 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
RPAP1-202ENST00000561603 LPAP08519 4548 aa4.41□□□□□ -1.7
RPAP1-202ENST00000561603 RNF213Q63HN8 5207 aa4.4□□□□□ -1.7
RPAP1-202ENST00000561603 ABCA13Q86UQ4 5058 aa4.38□□□□□ -1.71
RPAP1-202ENST00000561603 HERC1Q15751 4861 aa4.37□□□□□ -1.71
RPAP1-202ENST00000561603 HSPG2P98160 4391 aa4.37□□□□□ -1.71
RPAP1-202ENST00000561603 MUC2Q02817 5179 aa4.36□□□□□ -1.71
RPAP1-202ENST00000561603 KRTAP4-1Q9BYQ7 146 aa4.33□□□□□ -1.72
RPAP1-202ENST00000561603 KRTAP13-4Q3LI77 160 aa4.33□□□□□ -1.72
RPAP1-202ENST00000561603 PKHD1L1Q86WI1 4243 aa4.32□□□□□ -1.72
RPAP1-202ENST00000561603 KRTAP3-3Q9BYR6 98 aa4.32□□□□□ -1.72
RPAP1-202ENST00000561603 KRTAP12-2P59991 146 aa4.29□□□□□ -1.72
RPAP1-202ENST00000561603 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
RPAP1-202ENST00000561603 UBR4Q5T4S7 5183 aa4.29□□□□□ -1.72
RPAP1-202ENST00000561603 BIRC6Q9NR09 4857 aa4.26□□□□□ -1.73
RPAP1-202ENST00000561603 LORP23490 312 aaPredicted RBP4.26□□□□□ -1.73
RPAP1-202ENST00000561603 TNXBP22105 4242 aa4.25□□□□□ -1.73
RPAP1-202ENST00000561603 KRTAP3-2Q9BYR7 98 aa4.24□□□□□ -1.73
RPAP1-202ENST00000561603 FAT4Q6V0I7 4981 aa4.21□□□□□ -1.73
RPAP1-202ENST00000561603 TNP1P09430 55 aa4.2□□□□□ -1.74
RPAP1-202ENST00000561603 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
RPAP1-202ENST00000561603 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
RPAP1-202ENST00000561603 MT1HP80294 61 aa3.99□□□□□ -1.77
RPAP1-202ENST00000561603 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
RPAP1-202ENST00000561603 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
RPAP1-202ENST00000561603 HMCN2Q8NDA2 5059 aa3.95□□□□□ -1.78
RPAP1-202ENST00000561603 MT1FP04733 61 aa3.91□□□□□ -1.78
RPAP1-202ENST00000561603 MT2AP02795 61 aa3.9□□□□□ -1.79
RPAP1-202ENST00000561603 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
RPAP1-202ENST00000561603 USH2AO75445 5202 aa3.86□□□□□ -1.79
RPAP1-202ENST00000561603 MUC17Q685J3 4493 aa3.83□□□□□ -1.8
RPAP1-202ENST00000561603 KRTAP19-2Q3LHN2 52 aa3.83□□□□□ -1.8
RPAP1-202ENST00000561603 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
RPAP1-202ENST00000561603 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
RPAP1-202ENST00000561603 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
RPAP1-202ENST00000561603 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
RPAP1-202ENST00000561603 LCE2CQ5TA81 110 aa3.76□□□□□ -1.81
RPAP1-202ENST00000561603 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
RPAP1-202ENST00000561603 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
RPAP1-202ENST00000561603 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
RPAP1-202ENST00000561603 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
RPAP1-202ENST00000561603 KRTAP9-8Q9BYQ0 159 aa3.66□□□□□ -1.82
RPAP1-202ENST00000561603 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
RPAP1-202ENST00000561603 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.83
RPAP1-202ENST00000561603 KMT2DO14686 5537 aa3.63□□□□□ -1.83
RPAP1-202ENST00000561603 KRTAP4-8A0A0G2JLE6 195 aa3.61□□□□□ -1.83
RPAP1-202ENST00000561603 KRTAP4-8Q9BYQ9 185 aa3.61□□□□□ -1.83
RPAP1-202ENST00000561603 KRTAP8-1Q8IUC2 63 aa3.61□□□□□ -1.83
RPAP1-202ENST00000561603 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
RPAP1-202ENST00000561603 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
RPAP1-202ENST00000561603 LCE2BO14633 110 aa3.55□□□□□ -1.84
RPAP1-202ENST00000561603 MT1BP07438 61 aa3.54□□□□□ -1.84
RPAP1-202ENST00000561603 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
RPAP1-202ENST00000561603 KRTAP9-3Q9BYQ3 159 aa3.51□□□□□ -1.85
RPAP1-202ENST00000561603 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
RPAP1-202ENST00000561603 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
RPAP1-202ENST00000561603 MT1XP80297 61 aa3.49□□□□□ -1.85
RPAP1-202ENST00000561603 INE1O15225 51 aa3.48□□□□□ -1.85
RPAP1-202ENST00000561603 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
RPAP1-202ENST00000561603 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
RPAP1-202ENST00000561603 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
RPAP1-202ENST00000561603 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
RPAP1-202ENST00000561603 MUC12Q9UKN1 5478 aa3.38□□□□□ -1.87
RPAP1-202ENST00000561603 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
RPAP1-202ENST00000561603 LCE2AQ5TA79 106 aaPredicted RBP3.36□□□□□ -1.87
RPAP1-202ENST00000561603 KRTAP9-6A0A140TA67 174 aa3.36□□□□□ -1.87
RPAP1-202ENST00000561603 KRTAP9-2Q9BYQ4 174 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms