RNA–Protein interactions for RNA: ENST00000561603.5

RPAP1-202, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 5 BASIC

Gene RPAP1, Length 3,906 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-202ENST00000561603 NISCHQ9Y2I1 1504 aa17.52■□□□□ 0.4
RPAP1-202ENST00000561603 DCAF8L2P0C7V8 631 aa17.18■□□□□ 0.34
RPAP1-202ENST00000561603 SHROOM4Q9ULL8 1493 aa16.28■□□□□ 0.2
RPAP1-202ENST00000561603 SUPT5HO00267 1087 aaKnown RBP16.11■□□□□ 0.17
RPAP1-202ENST00000561603 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
RPAP1-202ENST00000561603 FAM9AQ8IZU1 332 aaPredicted RBP15.23■□□□□ 0.03
RPAP1-202ENST00000561603 TTBK1Q5TCY1 1321 aaPredicted RBP15.04■□□□□ -0
RPAP1-202ENST00000561603 ABCC9O60706 1549 aa15.01□□□□□ -0.01
RPAP1-202ENST00000561603 RANGAP1P46060 587 aaPredicted RBP14.99□□□□□ -0.01
RPAP1-202ENST00000561603 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
RPAP1-202ENST00000561603 PPARGC1BQ86YN6 1023 aaKnown RBP14.72□□□□□ -0.05
RPAP1-202ENST00000561603 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
RPAP1-202ENST00000561603 ZCCHC6Q5VYS8 1495 aaKnown RBP14.7□□□□□ -0.06
RPAP1-202ENST00000561603 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
RPAP1-202ENST00000561603 LOC105371045A0A1W2PR82 267 aa14.57□□□□□ -0.08
RPAP1-202ENST00000561603 PCGF6Q9BYE7 350 aa14.52□□□□□ -0.09
RPAP1-202ENST00000561603 ATP1B4Q9UN42 357 aaPredicted RBP14.47□□□□□ -0.09
RPAP1-202ENST00000561603 UBTFP17480 764 aaKnown RBP14.41□□□□□ -0.1
RPAP1-202ENST00000561603 CHIC1Q5VXU3 224 aa14.37□□□□□ -0.11
RPAP1-202ENST00000561603 APLP2Q06481 763 aa14.24□□□□□ -0.13
RPAP1-202ENST00000561603 SCRIBQ14160 1630 aa14.2□□□□□ -0.14
RPAP1-202ENST00000561603 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
RPAP1-202ENST00000561603 ITGAEP38570 1179 aa14.1□□□□□ -0.15
RPAP1-202ENST00000561603 MYO15BQ96JP2 1530 aa14.03□□□□□ -0.16
RPAP1-202ENST00000561603 ARID3CA6NKF2 412 aa13.97□□□□□ -0.17
RPAP1-202ENST00000561603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
RPAP1-202ENST00000561603 HNRNPUL2Q1KMD3 747 aaKnown RBP13.96□□□□□ -0.17
RPAP1-202ENST00000561603 CCER1Q8TC90 406 aaPredicted RBP13.93□□□□□ -0.18
RPAP1-202ENST00000561603 FBLN2P98095 1184 aa13.93□□□□□ -0.18
RPAP1-202ENST00000561603 RSF1Q96T23 1441 aaPredicted RBP13.91□□□□□ -0.18
RPAP1-202ENST00000561603 P3H3Q8IVL6 736 aa13.9□□□□□ -0.18
RPAP1-202ENST00000561603 NACADO15069 1562 aa13.83□□□□□ -0.2
RPAP1-202ENST00000561603 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
RPAP1-202ENST00000561603 CNGB1Q14028 1251 aaPredicted RBP13.76□□□□□ -0.21
RPAP1-202ENST00000561603 RB1CC1Q8TDY2 1594 aa13.74□□□□□ -0.21
RPAP1-202ENST00000561603 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.22
RPAP1-202ENST00000561603 HRCP23327 699 aa13.7□□□□□ -0.22
RPAP1-202ENST00000561603 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
RPAP1-202ENST00000561603 TRIM26Q12899 539 aaPredicted RBP13.65□□□□□ -0.22
RPAP1-202ENST00000561603 YTHDC1Q96MU7 727 aaKnown RBP13.62□□□□□ -0.23
RPAP1-202ENST00000561603 FAM50AQ14320 339 aaKnown RBP13.59□□□□□ -0.23
RPAP1-202ENST00000561603 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
RPAP1-202ENST00000561603 WIZO95785 1651 aa13.57□□□□□ -0.24
RPAP1-202ENST00000561603 POLR3GLQ9BT43 218 aa13.55□□□□□ -0.24
RPAP1-202ENST00000561603 BAZ1AQ9NRL2 1556 aaPredicted RBP13.51□□□□□ -0.25
RPAP1-202ENST00000561603 NEUROD1Q13562 356 aa13.44□□□□□ -0.26
RPAP1-202ENST00000561603 ZNF777Q9ULD5 760 aaPredicted RBP13.41□□□□□ -0.26
RPAP1-202ENST00000561603 CCDC88BA6NC98 1476 aa13.38□□□□□ -0.27
RPAP1-202ENST00000561603 SENP3Q9H4L4 574 aaPredicted RBP13.37□□□□□ -0.27
RPAP1-202ENST00000561603 PLPPR3Q6T4P5 718 aa13.37□□□□□ -0.27
RPAP1-202ENST00000561603 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
RPAP1-202ENST00000561603 TRIM52Q96A61 297 aa13.36□□□□□ -0.27
RPAP1-202ENST00000561603 SMARCA4P51532 1647 aa13.34□□□□□ -0.27
RPAP1-202ENST00000561603 ZNF326Q5BKZ1 582 aaKnown RBP13.33□□□□□ -0.28
RPAP1-202ENST00000561603 ZEB1P37275 1124 aaPredicted RBP13.32□□□□□ -0.28
RPAP1-202ENST00000561603 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
RPAP1-202ENST00000561603 BAZ1BQ9UIG0 1483 aaKnown RBP13.3□□□□□ -0.28
RPAP1-202ENST00000561603 TOP2AP11388 1531 aaKnown RBP13.3□□□□□ -0.28
RPAP1-202ENST00000561603 CHIC2Q9UKJ5 165 aa13.3□□□□□ -0.28
RPAP1-202ENST00000561603 SOGA1O94964 1423 aa13.27□□□□□ -0.29
RPAP1-202ENST00000561603 CHMP7Q8WUX9 453 aaPredicted RBP13.23□□□□□ -0.29
RPAP1-202ENST00000561603 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
RPAP1-202ENST00000561603 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
RPAP1-202ENST00000561603 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
RPAP1-202ENST00000561603 KCNH8Q96L42 1107 aa13.19□□□□□ -0.3
RPAP1-202ENST00000561603 HIRIP3Q9BW71 556 aaPredicted RBP13.17□□□□□ -0.3
RPAP1-202ENST00000561603 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
RPAP1-202ENST00000561603 CEP162Q5TB80 1403 aa13.16□□□□□ -0.3
RPAP1-202ENST00000561603 RUSC2Q8N2Y8 1516 aa13.16□□□□□ -0.3
RPAP1-202ENST00000561603 BICRAQ9NZM4 1560 aa13.15□□□□□ -0.3
RPAP1-202ENST00000561603 ATAD2BQ9ULI0 1458 aa13.15□□□□□ -0.3
RPAP1-202ENST00000561603 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
RPAP1-202ENST00000561603 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
RPAP1-202ENST00000561603 PELP1Q8IZL8 1130 aaKnown RBP13.09□□□□□ -0.31
RPAP1-202ENST00000561603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.09□□□□□ -0.31
RPAP1-202ENST00000561603 ERCC6Q03468 1493 aa13.07□□□□□ -0.32
RPAP1-202ENST00000561603 TNIKQ9UKE5 1360 aa13.07□□□□□ -0.32
RPAP1-202ENST00000561603 EEA1Q15075 1411 aa13.06□□□□□ -0.32
RPAP1-202ENST00000561603 GOLGA3Q08378 1498 aa13.06□□□□□ -0.32
RPAP1-202ENST00000561603 RRP7BPQ9NSQ0 103 aa13.06□□□□□ -0.32
RPAP1-202ENST00000561603 SENP3-EIF4A1A0A087X0R7 540 aa13.06□□□□□ -0.32
RPAP1-202ENST00000561603 DIEXFQ68CQ4 756 aaKnown RBP13.05□□□□□ -0.32
RPAP1-202ENST00000561603 CLIP1P30622 1438 aa13.04□□□□□ -0.32
RPAP1-202ENST00000561603 CHGAP10645 457 aaKnown RBP13□□□□□ -0.33
RPAP1-202ENST00000561603 CUX2O14529 1486 aa12.99□□□□□ -0.33
RPAP1-202ENST00000561603 CEP164Q9UPV0 1460 aa12.98□□□□□ -0.33
RPAP1-202ENST00000561603 KANK4Q5T7N3 995 aaPredicted RBP12.96□□□□□ -0.33
RPAP1-202ENST00000561603 CENPBP07199 599 aaPredicted RBP12.96□□□□□ -0.34
RPAP1-202ENST00000561603 KDM2AQ9Y2K7 1162 aa12.94□□□□□ -0.34
RPAP1-202ENST00000561603 BCANQ96GW7 911 aa12.94□□□□□ -0.34
RPAP1-202ENST00000561603 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
RPAP1-202ENST00000561603 EIF4G1Q04637 1599 aaKnown RBP12.93□□□□□ -0.34
RPAP1-202ENST00000561603 SYNJ1O43426 1573 aa12.93□□□□□ -0.34
RPAP1-202ENST00000561603 PLEKHG5O94827 1062 aa12.93□□□□□ -0.34
RPAP1-202ENST00000561603 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
RPAP1-202ENST00000561603 RAPGEF2Q9Y4G8 1499 aa12.91□□□□□ -0.34
RPAP1-202ENST00000561603 KIF27Q86VH2 1401 aa12.9□□□□□ -0.34
RPAP1-202ENST00000561603 CDK11AQ9UQ88 783 aaPredicted RBP12.89□□□□□ -0.35
RPAP1-202ENST00000561603 CARMIL1Q5VZK9 1371 aa12.89□□□□□ -0.35
RPAP1-202ENST00000561603 SIN3AQ96ST3 1273 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms