RNA–Protein interactions for RNA: ENST00000561211.5

USP8-217, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-217ENST00000561211 SPTBN5Q9NRC6 3674 aaKnown RBP0.32□□□□□ -2.36
USP8-217ENST00000561211 DNAH6Q9C0G6 4158 aa0.32□□□□□ -2.36
USP8-217ENST00000561211 H3BNG1 76 aa0.32□□□□□ -2.36
USP8-217ENST00000561211 KRTAP6-2Q3LI66 62 aa0.32□□□□□ -2.36
USP8-217ENST00000561211 LAMA5O15230 3695 aa0.32□□□□□ -2.36
USP8-217ENST00000561211 SPENQ96T58 3664 aaKnown RBP0.32□□□□□ -2.36
USP8-217ENST00000561211 DNAH1Q9P2D7 4330 aa0.31□□□□□ -2.36
USP8-217ENST00000561211 FRYQ5TBA9 3013 aa0.31□□□□□ -2.36
USP8-217ENST00000561211 SVEP1Q4LDE5 3571 aa0.31□□□□□ -2.36
USP8-217ENST00000561211 MUC5BQ9HC84 5762 aaPredicted RBP0.31□□□□□ -2.36
USP8-217ENST00000561211 DNAH7Q8WXX0 4024 aa0.3□□□□□ -2.36
USP8-217ENST00000561211 HTTP42858 3142 aa0.3□□□□□ -2.36
USP8-217ENST00000561211 MT1AP04731 61 aa0.3□□□□□ -2.36
USP8-217ENST00000561211 RPL39P62891 51 aaKnown RBP0.3□□□□□ -2.36
USP8-217ENST00000561211 MXRA5Q9NR99 2828 aa0.3□□□□□ -2.36
USP8-217ENST00000561211 ITPR3Q14573 2671 aa0.29□□□□□ -2.36
USP8-217ENST00000561211 TNP1P09430 55 aa0.29□□□□□ -2.36
USP8-217ENST00000561211 SPRR2AP35326 72 aa0.29□□□□□ -2.36
USP8-217ENST00000561211 KMT2DO14686 5537 aa0.28□□□□□ -2.36
USP8-217ENST00000561211 CEP250Q9BV73 2442 aa0.28□□□□□ -2.36
USP8-217ENST00000561211 ITPR1Q14643 2758 aa0.27□□□□□ -2.37
USP8-217ENST00000561211 CELSR3Q9NYQ7 3312 aa0.27□□□□□ -2.37
USP8-217ENST00000561211 SPTAN1Q13813 2472 aaKnown RBP0.26□□□□□ -2.37
USP8-217ENST00000561211 LAMA1P25391 3075 aa0.26□□□□□ -2.37
USP8-217ENST00000561211 MDN1Q9NU22 5596 aa0.26□□□□□ -2.37
USP8-217ENST00000561211 KRTAP8-1Q8IUC2 63 aa0.25□□□□□ -2.37
USP8-217ENST00000561211 RPL39LQ96EH5 51 aaKnown RBP0.25□□□□□ -2.37
USP8-217ENST00000561211 MUC5ACP98088 5654 aa0.24□□□□□ -2.37
USP8-217ENST00000561211 FAT1Q14517 4588 aa0.23□□□□□ -2.37
USP8-217ENST00000561211 SPRR2EP22531 72 aa0.23□□□□□ -2.37
USP8-217ENST00000561211 DOPEY1Q5JWR5 2465 aa0.22□□□□□ -2.37
USP8-217ENST00000561211 TEX15Q9BXT5 2789 aa0.22□□□□□ -2.37
USP8-217ENST00000561211 DEFB110Q30KQ9 67 aa0.22□□□□□ -2.37
USP8-217ENST00000561211 ADGRG4Q8IZF6 3080 aa0.22□□□□□ -2.37
USP8-217ENST00000561211 DNAH10Q8IVF4 4471 aa0.22□□□□□ -2.37
USP8-217ENST00000561211 ZFHX4Q86UP3 3567 aa0.21□□□□□ -2.38
USP8-217ENST00000561211 KRTAP19-5Q3LI72 72 aa0.21□□□□□ -2.38
USP8-217ENST00000561211 GCC2Q8IWJ2 1684 aa0.21□□□□□ -2.38
USP8-217ENST00000561211 SPRR2FQ96RM1 72 aa0.2□□□□□ -2.38
USP8-217ENST00000561211 C5orf42Q9H799 3197 aa0.19□□□□□ -2.38
USP8-217ENST00000561211 PLECQ15149 4684 aaKnown RBP0.18□□□□□ -2.38
USP8-217ENST00000561211 LEAP2Q969E1 77 aa0.18□□□□□ -2.38
USP8-217ENST00000561211 DMXL2Q8TDJ6 3036 aa0.18□□□□□ -2.38
USP8-217ENST00000561211 CSMD1Q96PZ7 3565 aa0.17□□□□□ -2.38
USP8-217ENST00000561211 TRIOO75962 3097 aa0.17□□□□□ -2.38
USP8-217ENST00000561211 SMR3BP02814 79 aaPredicted RBP0.17□□□□□ -2.38
USP8-217ENST00000561211 LRBAP50851 2863 aa0.16□□□□□ -2.38
USP8-217ENST00000561211 CFAP46Q8IYW2 2715 aa0.15□□□□□ -2.38
USP8-217ENST00000561211 MUC17Q685J3 4493 aa0.15□□□□□ -2.39
USP8-217ENST00000561211 MGAQ8IWI9 3026 aa0.14□□□□□ -2.39
USP8-217ENST00000561211 DNAH17Q9UFH2 4485 aa0.14□□□□□ -2.39
USP8-217ENST00000561211 ARHGAP5-AS1Q96IT6 56 aa0.14□□□□□ -2.39
USP8-217ENST00000561211 TOMM7Q9P0U1 55 aa0.14□□□□□ -2.39
USP8-217ENST00000561211 HERC1Q15751 4861 aa0.14□□□□□ -2.39
USP8-217ENST00000561211 LAMA3Q16787 3333 aa0.13□□□□□ -2.39
USP8-217ENST00000561211 CFAP54Q96N23 3096 aa0.13□□□□□ -2.39
USP8-217ENST00000561211 GPR98Q8WXG9 6306 aa0.13□□□□□ -2.39
USP8-217ENST00000561211 RELNP78509 3460 aa0.13□□□□□ -2.39
USP8-217ENST00000561211 CMYA5Q8N3K9 4069 aa0.13□□□□□ -2.39
USP8-217ENST00000561211 DYNC1H1Q14204 4646 aaKnown RBP0.13□□□□□ -2.39
USP8-217ENST00000561211 STARD9Q9P2P6 4700 aa0.12□□□□□ -2.39
USP8-217ENST00000561211 SPART-AS1P0CW21 52 aa0.11□□□□□ -2.39
USP8-217ENST00000561211 PCLOQ9Y6V0 5065 aa0.11□□□□□ -2.39
USP8-217ENST00000561211 MYO9AB2RTY4 2548 aa0.11□□□□□ -2.39
USP8-217ENST00000561211 SYNE2Q8WXH0 6885 aaKnown RBP0.1□□□□□ -2.39
USP8-217ENST00000561211 ATMQ13315 3056 aa0.1□□□□□ -2.39
USP8-217ENST00000561211 MUC2Q02817 5179 aa0.09□□□□□ -2.4
USP8-217ENST00000561211 FSIP2Q5CZC0 6907 aa0.08□□□□□ -2.4
USP8-217ENST00000561211 ITPR2Q14571 2701 aa0.08□□□□□ -2.4
USP8-217ENST00000561211 MUC12Q9UKN1 5478 aa0.08□□□□□ -2.4
USP8-217ENST00000561211 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
USP8-217ENST00000561211 TRRAPQ9Y4A5 3859 aa0.06□□□□□ -2.4
USP8-217ENST00000561211 LINC01590Q5TEZ4 76 aa0.05□□□□□ -2.4
USP8-217ENST00000561211 SMG1Q96Q15 3661 aaKnown RBP0.05□□□□□ -2.4
USP8-217ENST00000561211 PRUNE2Q8WUY3 3088 aa0.04□□□□□ -2.4
USP8-217ENST00000561211 KMT2CQ8NEZ4 4911 aaKnown RBP0.04□□□□□ -2.4
USP8-217ENST00000561211 DEFB104AQ8WTQ1 72 aa0.03□□□□□ -2.4
USP8-217ENST00000561211 SPRR2GQ9BYE4 73 aa0.03□□□□□ -2.4
USP8-217ENST00000561211 NIPBLQ6KC79 2804 aaeCLIP0.03□□□□□ -2.41
USP8-217ENST00000561211 DNAH12Q6ZR08 3092 aa0.02□□□□□ -2.41
USP8-217ENST00000561211 UBR4Q5T4S7 5183 aa0.01□□□□□ -2.41
USP8-217ENST00000561211 USH2AO75445 5202 aa0.01□□□□□ -2.41
USP8-217ENST00000561211 DNAH5Q8TE73 4624 aa0.01□□□□□ -2.41
USP8-217ENST00000561211 MACF1Q9UPN3 7388 aaKnown RBP0.01□□□□□ -2.41
USP8-217ENST00000561211 TLN1Q9Y490 2541 aaKnown RBP0.01□□□□□ -2.41
USP8-217ENST00000561211 MT1HP80294 61 aa0□□□□□ -2.41
USP8-217ENST00000561211 PRCDQ00LT1 54 aa0□□□□□ -2.41
USP8-217ENST00000561211 FRYLO94915 3013 aa-0□□□□□ -2.41
USP8-217ENST00000561211 K7EIM0 57 aa-0.01□□□□□ -2.41
USP8-217ENST00000561211 DEFB1P60022 68 aa-0.01□□□□□ -2.41
USP8-217ENST00000561211 SRCAPQ6ZRS2 3230 aa-0.01□□□□□ -2.41
USP8-217ENST00000561211 CEP295Q9C0D2 2601 aa-0.02□□□□□ -2.41
USP8-217ENST00000561211 VPS13CQ709C8 3753 aa-0.02□□□□□ -2.41
USP8-217ENST00000561211 DMDP11532 3685 aa-0.02□□□□□ -2.41
USP8-217ENST00000561211 TTTY10Q9BZA0 68 aa-0.03□□□□□ -2.41
USP8-217ENST00000561211 MT1EP04732 61 aa-0.04□□□□□ -2.42
USP8-217ENST00000561211 LAMA2P24043 3122 aaKnown RBP-0.04□□□□□ -2.42
USP8-217ENST00000561211 DNHD1Q96M86 4753 aa-0.05□□□□□ -2.42
USP8-217ENST00000561211 KRTAP19-7Q3SYF9 63 aa-0.06□□□□□ -2.42
USP8-217ENST00000561211 RYR1P21817 5038 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms