RNA–Protein interactions for RNA: ENST00000561208.5

MEIS2-222, Transcript of Meis homeobox 2, humanhuman

TSL 1 (best) BASIC

Gene MEIS2, Length 4,822 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS2-222ENST00000561208 VPS13DQ5THJ4 4388 aa5.03□□□□□ -1.6
MEIS2-222ENST00000561208 KRTAP10-10P60014 251 aa4.98□□□□□ -1.61
MEIS2-222ENST00000561208 PKHD1P08F94 4074 aa4.95□□□□□ -1.62
MEIS2-222ENST00000561208 FRAS1Q86XX4 4008 aa4.95□□□□□ -1.62
MEIS2-222ENST00000561208 DNAH17Q9UFH2 4485 aa4.95□□□□□ -1.62
MEIS2-222ENST00000561208 HUWE1Q7Z6Z7 4374 aaKnown RBP4.91□□□□□ -1.62
MEIS2-222ENST00000561208 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
MEIS2-222ENST00000561208 KRTAP10-4P60372 401 aaPredicted RBP4.84□□□□□ -1.63
MEIS2-222ENST00000561208 KMT2AQ03164 3969 aa4.82□□□□□ -1.64
MEIS2-222ENST00000561208 PKHD1L1Q86WI1 4243 aa4.82□□□□□ -1.64
MEIS2-222ENST00000561208 MT1HL1P0DM35 61 aa4.8□□□□□ -1.64
MEIS2-222ENST00000561208 DNAH9Q9NYC9 4486 aa4.77□□□□□ -1.65
MEIS2-222ENST00000561208 ALMS1Q8TCU4 4167 aa4.76□□□□□ -1.65
MEIS2-222ENST00000561208 DNAH8Q96JB1 4490 aa4.75□□□□□ -1.65
MEIS2-222ENST00000561208 INE1O15225 51 aa4.72□□□□□ -1.65
MEIS2-222ENST00000561208 VPS13BQ7Z7G8 4022 aa4.69□□□□□ -1.66
MEIS2-222ENST00000561208 PKD1P98161 4303 aa4.69□□□□□ -1.66
MEIS2-222ENST00000561208 LORP23490 312 aaPredicted RBP4.66□□□□□ -1.66
MEIS2-222ENST00000561208 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
MEIS2-222ENST00000561208 DNAH10Q8IVF4 4471 aa4.64□□□□□ -1.67
MEIS2-222ENST00000561208 FAT3Q8TDW7 4589 aa4.63□□□□□ -1.67
MEIS2-222ENST00000561208 PLECQ15149 4684 aaKnown RBP4.62□□□□□ -1.67
MEIS2-222ENST00000561208 DNAH2Q9P225 4427 aa4.61□□□□□ -1.67
MEIS2-222ENST00000561208 DNAH11Q96DT5 4516 aa4.6□□□□□ -1.67
MEIS2-222ENST00000561208 DNAH5Q8TE73 4624 aa4.59□□□□□ -1.67
MEIS2-222ENST00000561208 DNHD1Q96M86 4753 aa4.54□□□□□ -1.68
MEIS2-222ENST00000561208 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
MEIS2-222ENST00000561208 HSPG2P98160 4391 aa4.53□□□□□ -1.68
MEIS2-222ENST00000561208 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
MEIS2-222ENST00000561208 TNXBP22105 4242 aa4.52□□□□□ -1.69
MEIS2-222ENST00000561208 FAT2Q9NYQ8 4349 aa4.5□□□□□ -1.69
MEIS2-222ENST00000561208 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
MEIS2-222ENST00000561208 KRTAP4-5Q9BYR2 181 aa4.47□□□□□ -1.69
MEIS2-222ENST00000561208 LRP1BQ9NZR2 4599 aa4.44□□□□□ -1.7
MEIS2-222ENST00000561208 SACSQ9NZJ4 4579 aa4.44□□□□□ -1.7
MEIS2-222ENST00000561208 STARD9Q9P2P6 4700 aa4.4□□□□□ -1.71
MEIS2-222ENST00000561208 FAT1Q14517 4588 aa4.39□□□□□ -1.71
MEIS2-222ENST00000561208 DYNC1H1Q14204 4646 aaKnown RBP4.37□□□□□ -1.71
MEIS2-222ENST00000561208 KRTAP4-1Q9BYQ7 146 aa4.35□□□□□ -1.71
MEIS2-222ENST00000561208 APOBP04114 4563 aaKnown RBP4.26□□□□□ -1.73
MEIS2-222ENST00000561208 SPRR2GQ9BYE4 73 aa4.23□□□□□ -1.73
MEIS2-222ENST00000561208 MYCBP2O75592 4640 aa4.22□□□□□ -1.73
MEIS2-222ENST00000561208 CRCT1Q9UGL9 99 aa4.2□□□□□ -1.74
MEIS2-222ENST00000561208 RYR1P21817 5038 aa4.18□□□□□ -1.74
MEIS2-222ENST00000561208 RYR3Q15413 4870 aa4.16□□□□□ -1.74
MEIS2-222ENST00000561208 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.74
MEIS2-222ENST00000561208 HYDINQ4G0P3 5121 aa4.13□□□□□ -1.75
MEIS2-222ENST00000561208 MT2AP02795 61 aa4.12□□□□□ -1.75
MEIS2-222ENST00000561208 RYR2Q92736 4967 aa4.11□□□□□ -1.75
MEIS2-222ENST00000561208 MT1HP80294 61 aa4.1□□□□□ -1.75
MEIS2-222ENST00000561208 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
MEIS2-222ENST00000561208 MT1FP04733 61 aa4.06□□□□□ -1.76
MEIS2-222ENST00000561208 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
MEIS2-222ENST00000561208 FLGP20930 4061 aaPredicted RBP4.06□□□□□ -1.76
MEIS2-222ENST00000561208 LRP1Q07954 4544 aaKnown RBP4.05□□□□□ -1.76
MEIS2-222ENST00000561208 KMT2CQ8NEZ4 4911 aaKnown RBP4.02□□□□□ -1.77
MEIS2-222ENST00000561208 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
MEIS2-222ENST00000561208 KIAA1109Q2LD37 5005 aa4.01□□□□□ -1.77
MEIS2-222ENST00000561208 KRTAP19-1Q8IUB9 90 aa4.01□□□□□ -1.77
MEIS2-222ENST00000561208 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
MEIS2-222ENST00000561208 HERC2O95714 4834 aa4□□□□□ -1.77
MEIS2-222ENST00000561208 BIRC6Q9NR09 4857 aa4□□□□□ -1.77
MEIS2-222ENST00000561208 KRTAP17-1Q9BYP8 105 aa3.99□□□□□ -1.77
MEIS2-222ENST00000561208 KRTAP19-8Q3LI54 63 aa3.92□□□□□ -1.78
MEIS2-222ENST00000561208 LRP2P98164 4655 aa3.92□□□□□ -1.78
MEIS2-222ENST00000561208 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.78
MEIS2-222ENST00000561208 MT1XP80297 61 aa3.86□□□□□ -1.79
MEIS2-222ENST00000561208 EPPK1P58107 5090 aaKnown RBP3.86□□□□□ -1.79
MEIS2-222ENST00000561208 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
MEIS2-222ENST00000561208 MT1BP07438 61 aa3.81□□□□□ -1.8
MEIS2-222ENST00000561208 MUC17Q685J3 4493 aa3.79□□□□□ -1.8
MEIS2-222ENST00000561208 PCLOQ9Y6V0 5065 aa3.76□□□□□ -1.81
MEIS2-222ENST00000561208 KRTAP9-8Q9BYQ0 159 aa3.75□□□□□ -1.81
MEIS2-222ENST00000561208 LCE2CQ5TA81 110 aa3.73□□□□□ -1.81
MEIS2-222ENST00000561208 KRTAP19-2Q3LHN2 52 aa3.72□□□□□ -1.81
MEIS2-222ENST00000561208 ABCA13Q86UQ4 5058 aa3.7□□□□□ -1.82
MEIS2-222ENST00000561208 LPAP08519 4548 aa3.68□□□□□ -1.82
MEIS2-222ENST00000561208 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
MEIS2-222ENST00000561208 KRTAP4-8A0A0G2JLE6 195 aa3.65□□□□□ -1.83
MEIS2-222ENST00000561208 KRTAP4-8Q9BYQ9 185 aa3.65□□□□□ -1.83
MEIS2-222ENST00000561208 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
MEIS2-222ENST00000561208 SPRR2FQ96RM1 72 aa3.62□□□□□ -1.83
MEIS2-222ENST00000561208 MT1GP13640 62 aa3.58□□□□□ -1.84
MEIS2-222ENST00000561208 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
MEIS2-222ENST00000561208 HERC1Q15751 4861 aa3.54□□□□□ -1.84
MEIS2-222ENST00000561208 KRTAP4-7Q9BYR0 210 aa3.53□□□□□ -1.84
MEIS2-222ENST00000561208 MT1LQ93083 61 aa3.48□□□□□ -1.85
MEIS2-222ENST00000561208 LCE2BO14633 110 aa3.44□□□□□ -1.86
MEIS2-222ENST00000561208 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
MEIS2-222ENST00000561208 MT1EP04732 61 aa3.43□□□□□ -1.86
MEIS2-222ENST00000561208 HMCN2Q8NDA2 5059 aa3.41□□□□□ -1.86
MEIS2-222ENST00000561208 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
MEIS2-222ENST00000561208 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
MEIS2-222ENST00000561208 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
MEIS2-222ENST00000561208 UBR4Q5T4S7 5183 aa3.34□□□□□ -1.87
MEIS2-222ENST00000561208 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.88
MEIS2-222ENST00000561208 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.88
MEIS2-222ENST00000561208 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.88
MEIS2-222ENST00000561208 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
MEIS2-222ENST00000561208 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms