RNA–Protein interactions for RNA: ENST00000561208.5

MEIS2-222, Transcript of Meis homeobox 2, humanhuman

TSL 1 (best) BASIC

Gene MEIS2, Length 4,822 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS2-222ENST00000561208 NISCHQ9Y2I1 1504 aa17.87■□□□□ 0.45
MEIS2-222ENST00000561208 DCAF8L2P0C7V8 631 aa17.63■□□□□ 0.41
MEIS2-222ENST00000561208 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
MEIS2-222ENST00000561208 SHROOM4Q9ULL8 1493 aa17.19■□□□□ 0.34
MEIS2-222ENST00000561208 PCGF6Q9BYE7 350 aa16.94■□□□□ 0.3
MEIS2-222ENST00000561208 PELP1Q8IZL8 1130 aaKnown RBP16.76■□□□□ 0.27
MEIS2-222ENST00000561208 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
MEIS2-222ENST00000561208 ZEB1P37275 1124 aaPredicted RBP16.59■□□□□ 0.25
MEIS2-222ENST00000561208 HRCP23327 699 aa16.54■□□□□ 0.24
MEIS2-222ENST00000561208 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
MEIS2-222ENST00000561208 FAM9AQ8IZU1 332 aaPredicted RBP16.44■□□□□ 0.22
MEIS2-222ENST00000561208 MYT1Q01538 1121 aa16.41■□□□□ 0.22
MEIS2-222ENST00000561208 CCER1Q8TC90 406 aaPredicted RBP16.29■□□□□ 0.2
MEIS2-222ENST00000561208 TRIM26Q12899 539 aaPredicted RBP16.24■□□□□ 0.19
MEIS2-222ENST00000561208 APLP2Q06481 763 aa16.24■□□□□ 0.19
MEIS2-222ENST00000561208 TTBK1Q5TCY1 1321 aaPredicted RBP16.23■□□□□ 0.19
MEIS2-222ENST00000561208 TRIM41Q8WV44 630 aa16.21■□□□□ 0.19
MEIS2-222ENST00000561208 PPARGC1BQ86YN6 1023 aaKnown RBP16.16■□□□□ 0.18
MEIS2-222ENST00000561208 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
MEIS2-222ENST00000561208 YTHDC1Q96MU7 727 aaKnown RBP16.04■□□□□ 0.16
MEIS2-222ENST00000561208 LOC105371045A0A1W2PR82 267 aa16.01■□□□□ 0.15
MEIS2-222ENST00000561208 ERICH6Q7L0X2 663 aa15.94■□□□□ 0.14
MEIS2-222ENST00000561208 UBTFP17480 764 aaKnown RBP15.82■□□□□ 0.12
MEIS2-222ENST00000561208 NEFLP07196 543 aa15.79■□□□□ 0.12
MEIS2-222ENST00000561208 RANGAP1P46060 587 aaPredicted RBP15.77■□□□□ 0.12
MEIS2-222ENST00000561208 DIEXFQ68CQ4 756 aaKnown RBP15.71■□□□□ 0.11
MEIS2-222ENST00000561208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.66■□□□□ 0.1
MEIS2-222ENST00000561208 GTF3C3Q9Y5Q9 886 aa15.62■□□□□ 0.09
MEIS2-222ENST00000561208 ACIN1Q9UKV3 1341 aaKnown RBP15.52■□□□□ 0.07
MEIS2-222ENST00000561208 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
MEIS2-222ENST00000561208 ATP1B4Q9UN42 357 aaPredicted RBP15.46■□□□□ 0.07
MEIS2-222ENST00000561208 DCAF1Q9Y4B6 1507 aa15.35■□□□□ 0.05
MEIS2-222ENST00000561208 ZNF316A6NFI3 1004 aaPredicted RBP15.33■□□□□ 0.04
MEIS2-222ENST00000561208 ITGAEP38570 1179 aa15.33■□□□□ 0.04
MEIS2-222ENST00000561208 SCAF1Q9H7N4 1312 aaKnown RBP15.3■□□□□ 0.04
MEIS2-222ENST00000561208 NEUROD1Q13562 356 aa15.22■□□□□ 0.03
MEIS2-222ENST00000561208 BCANQ96GW7 911 aa15.19■□□□□ 0.02
MEIS2-222ENST00000561208 DAXXQ9UER7 740 aaPredicted RBP15.12■□□□□ 0.01
MEIS2-222ENST00000561208 RTL5Q5HYW3 569 aaPredicted RBP15.11■□□□□ 0.01
MEIS2-222ENST00000561208 MYO15BQ96JP2 1530 aa15.09■□□□□ 0.01
MEIS2-222ENST00000561208 CLSPNQ9HAW4 1339 aa15.06■□□□□ 0
MEIS2-222ENST00000561208 POLR3GLQ9BT43 218 aa15.03■□□□□ -0
MEIS2-222ENST00000561208 CDK11AQ9UQ88 783 aaPredicted RBP15.02■□□□□ -0
MEIS2-222ENST00000561208 ANP32CO43423 234 aa14.99□□□□□ -0.01
MEIS2-222ENST00000561208 CNGB1Q14028 1251 aaPredicted RBP14.98□□□□□ -0.01
MEIS2-222ENST00000561208 FAM50AQ14320 339 aaKnown RBP14.94□□□□□ -0.02
MEIS2-222ENST00000561208 ZCCHC6Q5VYS8 1495 aaKnown RBP14.93□□□□□ -0.02
MEIS2-222ENST00000561208 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
MEIS2-222ENST00000561208 FKBP8Q14318 412 aa14.88□□□□□ -0.03
MEIS2-222ENST00000561208 MIER1Q8N108 512 aa14.88□□□□□ -0.03
MEIS2-222ENST00000561208 CCDC180Q9P1Z9 1646 aa14.86□□□□□ -0.03
MEIS2-222ENST00000561208 TRIM52Q96A61 297 aa14.76□□□□□ -0.05
MEIS2-222ENST00000561208 ANP32AP39687 249 aaKnown RBP14.73□□□□□ -0.05
MEIS2-222ENST00000561208 MYT1LQ9UL68 1186 aa14.72□□□□□ -0.05
MEIS2-222ENST00000561208 DDX10Q13206 875 aaKnown RBP14.71□□□□□ -0.05
MEIS2-222ENST00000561208 ANP32EQ9BTT0 268 aa14.69□□□□□ -0.06
MEIS2-222ENST00000561208 HNRNPUQ00839 825 aaKnown RBP eCLIP14.65□□□□□ -0.06
MEIS2-222ENST00000561208 ABCC9O60706 1549 aa14.61□□□□□ -0.07
MEIS2-222ENST00000561208 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
MEIS2-222ENST00000561208 ZNF326Q5BKZ1 582 aaKnown RBP14.58□□□□□ -0.08
MEIS2-222ENST00000561208 NPM2Q86SE8 214 aaKnown RBP14.58□□□□□ -0.08
MEIS2-222ENST00000561208 TONSLQ96HA7 1378 aa14.56□□□□□ -0.08
MEIS2-222ENST00000561208 SUPT16HQ9Y5B9 1047 aaKnown RBP14.53□□□□□ -0.08
MEIS2-222ENST00000561208 NBR1Q14596 966 aa14.53□□□□□ -0.08
MEIS2-222ENST00000561208 SCRIBQ14160 1630 aa14.53□□□□□ -0.08
MEIS2-222ENST00000561208 CEP162Q5TB80 1403 aa14.52□□□□□ -0.08
MEIS2-222ENST00000561208 EIF5BO60841 1220 aaKnown RBP14.51□□□□□ -0.09
MEIS2-222ENST00000561208 FAM9BQ8IZU0 186 aa14.51□□□□□ -0.09
MEIS2-222ENST00000561208 RSF1Q96T23 1441 aaPredicted RBP14.5□□□□□ -0.09
MEIS2-222ENST00000561208 P3H3Q8IVL6 736 aa14.5□□□□□ -0.09
MEIS2-222ENST00000561208 ZBTB47Q9UFB7 747 aaPredicted RBP14.5□□□□□ -0.09
MEIS2-222ENST00000561208 IRX6P78412 446 aaPredicted RBP14.48□□□□□ -0.09
MEIS2-222ENST00000561208 CLIP1P30622 1438 aa14.47□□□□□ -0.09
MEIS2-222ENST00000561208 CCDC136Q96JN2 1154 aa14.47□□□□□ -0.09
MEIS2-222ENST00000561208 SLC4A1APQ9BWU0 796 aaKnown RBP14.44□□□□□ -0.1
MEIS2-222ENST00000561208 HIRIP3Q9BW71 556 aaPredicted RBP14.43□□□□□ -0.1
MEIS2-222ENST00000561208 BCL11AQ9H165 835 aa14.42□□□□□ -0.1
MEIS2-222ENST00000561208 EEA1Q15075 1411 aa14.42□□□□□ -0.1
MEIS2-222ENST00000561208 TNIKQ9UKE5 1360 aa14.41□□□□□ -0.1
MEIS2-222ENST00000561208 MRS2Q9HD23 443 aa14.4□□□□□ -0.1
MEIS2-222ENST00000561208 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
MEIS2-222ENST00000561208 CANXP27824 592 aaKnown RBP14.36□□□□□ -0.11
MEIS2-222ENST00000561208 TMC1Q8TDI8 760 aa14.31□□□□□ -0.12
MEIS2-222ENST00000561208 RBM19Q9Y4C8 960 aaKnown RBP14.3□□□□□ -0.12
MEIS2-222ENST00000561208 SALL2Q9Y467 1007 aaPredicted RBP14.29□□□□□ -0.12
MEIS2-222ENST00000561208 GLIPR1L2Q4G1C9 344 aa14.29□□□□□ -0.12
MEIS2-222ENST00000561208 TSHZ2Q9NRE2 1034 aa14.29□□□□□ -0.12
MEIS2-222ENST00000561208 EIF4G2P78344 907 aaKnown RBP eCLIP14.27□□□□□ -0.129e-7■■■■□ 23
MEIS2-222ENST00000561208 ARID3CA6NKF2 412 aa14.26□□□□□ -0.13
MEIS2-222ENST00000561208 PPP4R2Q9NY27 417 aa14.26□□□□□ -0.13
MEIS2-222ENST00000561208 RB1CC1Q8TDY2 1594 aa14.25□□□□□ -0.13
MEIS2-222ENST00000561208 CHIC2Q9UKJ5 165 aa14.23□□□□□ -0.13
MEIS2-222ENST00000561208 UPF2Q9HAU5 1272 aaKnown RBP14.22□□□□□ -0.13
MEIS2-222ENST00000561208 CEP164Q9UPV0 1460 aa14.22□□□□□ -0.13
MEIS2-222ENST00000561208 NOP58Q9Y2X3 529 aaKnown RBP14.22□□□□□ -0.13
MEIS2-222ENST00000561208 SIN3AQ96ST3 1273 aa14.19□□□□□ -0.14
MEIS2-222ENST00000561208 ZNF777Q9ULD5 760 aaPredicted RBP14.19□□□□□ -0.14
MEIS2-222ENST00000561208 WRNQ14191 1432 aaPredicted RBP eCLIP14.19□□□□□ -0.14
MEIS2-222ENST00000561208 DDRGK1Q96HY6 314 aa14.18□□□□□ -0.14
MEIS2-222ENST00000561208 ANP32BQ92688 251 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms