RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SPINK1P00995 79 aa3.23□□□□□ -1.89
SNRPA1-209ENST00000560307 FBN1P35555 2871 aaKnown RBP3.23□□□□□ -1.89
SNRPA1-209ENST00000560307 SRRM2Q9UQ35 2752 aaKnown RBP3.23□□□□□ -1.89
SNRPA1-209ENST00000560307 BAHCC1Q9P281 2608 aa3.22□□□□□ -1.89
SNRPA1-209ENST00000560307 COX6B2Q6YFQ2 88 aa3.21□□□□□ -1.9
SNRPA1-209ENST00000560307 MAST4O15021 2626 aa3.21□□□□□ -1.9
SNRPA1-209ENST00000560307 P0C880 135 aa3.2□□□□□ -1.9
SNRPA1-209ENST00000560307 CAMK2N1Q7Z7J9 78 aa3.2□□□□□ -1.9
SNRPA1-209ENST00000560307 FRAS1Q86XX4 4008 aa3.2□□□□□ -1.9
SNRPA1-209ENST00000560307 LYSTQ99698 3801 aa3.19□□□□□ -1.9
SNRPA1-209ENST00000560307 DNAH7Q8WXX0 4024 aa3.19□□□□□ -1.9
SNRPA1-209ENST00000560307 ATRQ13535 2644 aa3.19□□□□□ -1.9
SNRPA1-209ENST00000560307 KRTAP1-4P0C5Y4 121 aa3.18□□□□□ -1.9
SNRPA1-209ENST00000560307 C20orf166-AS1Q96NR2 134 aa3.18□□□□□ -1.9
SNRPA1-209ENST00000560307 HELZ2Q9BYK8 2649 aaKnown RBP3.17□□□□□ -1.9
SNRPA1-209ENST00000560307 RPL37P61927 97 aaKnown RBP3.17□□□□□ -1.9
SNRPA1-209ENST00000560307 DNAH6Q9C0G6 4158 aa3.17□□□□□ -1.9
SNRPA1-209ENST00000560307 ITPR2Q14571 2701 aa3.16□□□□□ -1.9
SNRPA1-209ENST00000560307 FLNBO75369 2602 aaKnown RBP3.15□□□□□ -1.91
SNRPA1-209ENST00000560307 HECTD4Q9Y4D8 3996 aa3.15□□□□□ -1.91
SNRPA1-209ENST00000560307 DNAH2Q9P225 4427 aa3.15□□□□□ -1.91
SNRPA1-209ENST00000560307 SPINT4Q6UDR6 99 aa3.14□□□□□ -1.91
SNRPA1-209ENST00000560307 FASNP49327 2511 aaKnown RBP3.13□□□□□ -1.91
SNRPA1-209ENST00000560307 DNAH11Q96DT5 4516 aa3.13□□□□□ -1.91
SNRPA1-209ENST00000560307 PLECQ15149 4684 aaKnown RBP3.12□□□□□ -1.91
SNRPA1-209ENST00000560307 SACSQ9NZJ4 4579 aa3.1□□□□□ -1.91
SNRPA1-209ENST00000560307 TPRXLQ17RH7 258 aa3.1□□□□□ -1.91
SNRPA1-209ENST00000560307 KRTAP10-12P60413 245 aa3.09□□□□□ -1.91
SNRPA1-209ENST00000560307 MEGF8Q7Z7M0 2845 aa3.07□□□□□ -1.92
SNRPA1-209ENST00000560307 CRIPTQ9P021 101 aa3.07□□□□□ -1.92
SNRPA1-209ENST00000560307 NBEAL1Q6ZS30 2694 aa3.05□□□□□ -1.92
SNRPA1-209ENST00000560307 KRTAP10-1P60331 282 aa3.05□□□□□ -1.92
SNRPA1-209ENST00000560307 COL7A1Q02388 2944 aa3.05□□□□□ -1.92
SNRPA1-209ENST00000560307 FBN3Q75N90 2809 aa3.04□□□□□ -1.92
SNRPA1-209ENST00000560307 CSMD3Q7Z407 3707 aa3.04□□□□□ -1.92
SNRPA1-209ENST00000560307 KRTAP13-4Q3LI77 160 aa3.03□□□□□ -1.92
SNRPA1-209ENST00000560307 S4R3F8 94 aa3.03□□□□□ -1.92
SNRPA1-209ENST00000560307 DNAH5Q8TE73 4624 aa3.03□□□□□ -1.92
SNRPA1-209ENST00000560307 TGP01266 2768 aa3.02□□□□□ -1.93
SNRPA1-209ENST00000560307 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
SNRPA1-209ENST00000560307 STAB2Q8WWQ8 2551 aa3.01□□□□□ -1.93
SNRPA1-209ENST00000560307 C9orf92A6NGG3 77 aa3.01□□□□□ -1.93
SNRPA1-209ENST00000560307 PKHD1L1Q86WI1 4243 aa3.01□□□□□ -1.93
SNRPA1-209ENST00000560307 STARD9Q9P2P6 4700 aa3□□□□□ -1.93
SNRPA1-209ENST00000560307 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
SNRPA1-209ENST00000560307 NOTCH1P46531 2555 aa2.99□□□□□ -1.93
SNRPA1-209ENST00000560307 STAB1Q9NY15 2570 aa2.99□□□□□ -1.93
SNRPA1-209ENST00000560307 A0A0D9SG42 100 aa2.98□□□□□ -1.93
SNRPA1-209ENST00000560307 COL6A5A8TX70 2615 aa2.97□□□□□ -1.93
SNRPA1-209ENST00000560307 M0QZ58 72 aa2.97□□□□□ -1.93
SNRPA1-209ENST00000560307 KRTAP12-1P59990 96 aa2.97□□□□□ -1.93
SNRPA1-209ENST00000560307 LRP1BQ9NZR2 4599 aa2.97□□□□□ -1.93
SNRPA1-209ENST00000560307 KRTAP12-2P59991 146 aa2.96□□□□□ -1.94
SNRPA1-209ENST00000560307 PKD1P98161 4303 aa2.96□□□□□ -1.94
SNRPA1-209ENST00000560307 PKHD1P08F94 4074 aa2.92□□□□□ -1.94
SNRPA1-209ENST00000560307 FLG2Q5D862 2391 aaPredicted RBP2.92□□□□□ -1.94
SNRPA1-209ENST00000560307 MGAM2Q2M2H8 2515 aa2.91□□□□□ -1.94
SNRPA1-209ENST00000560307 VPS13BQ7Z7G8 4022 aa2.91□□□□□ -1.94
SNRPA1-209ENST00000560307 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
SNRPA1-209ENST00000560307 KMT2AQ03164 3969 aa2.91□□□□□ -1.94
SNRPA1-209ENST00000560307 APOBP04114 4563 aaKnown RBP2.9□□□□□ -1.95
SNRPA1-209ENST00000560307 FAT2Q9NYQ8 4349 aa2.9□□□□□ -1.95
SNRPA1-209ENST00000560307 KRTAP10-4P60372 401 aaPredicted RBP2.9□□□□□ -1.95
SNRPA1-209ENST00000560307 TNXBP22105 4242 aa2.88□□□□□ -1.95
SNRPA1-209ENST00000560307 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
SNRPA1-209ENST00000560307 PLAC4Q8WY50 150 aa2.87□□□□□ -1.95
SNRPA1-209ENST00000560307 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
SNRPA1-209ENST00000560307 HSPG2P98160 4391 aa2.86□□□□□ -1.95
SNRPA1-209ENST00000560307 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
SNRPA1-209ENST00000560307 DYNC1H1Q14204 4646 aaKnown RBP2.84□□□□□ -1.95
SNRPA1-209ENST00000560307 KRTAP10-8P60410 259 aa2.84□□□□□ -1.95
SNRPA1-209ENST00000560307 LRP1Q07954 4544 aaKnown RBP2.84□□□□□ -1.96
SNRPA1-209ENST00000560307 FAT3Q8TDW7 4589 aa2.82□□□□□ -1.96
SNRPA1-209ENST00000560307 FAT1Q14517 4588 aa2.8□□□□□ -1.96
SNRPA1-209ENST00000560307 A0A1B0GVY2 172 aa2.8□□□□□ -1.96
SNRPA1-209ENST00000560307 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
SNRPA1-209ENST00000560307 SMR3BP02814 79 aaPredicted RBP2.79□□□□□ -1.96
SNRPA1-209ENST00000560307 R4GN34 69 aa2.77□□□□□ -1.97
SNRPA1-209ENST00000560307 MYCBP2O75592 4640 aa2.76□□□□□ -1.97
SNRPA1-209ENST00000560307 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
SNRPA1-209ENST00000560307 DMBT1Q9UGM3 2413 aaPredicted RBP2.71□□□□□ -1.98
SNRPA1-209ENST00000560307 HYDINQ4G0P3 5121 aa2.71□□□□□ -1.98
SNRPA1-209ENST00000560307 DNHD1Q96M86 4753 aa2.68□□□□□ -1.98
SNRPA1-209ENST00000560307 Q5VSD8 79 aa2.66□□□□□ -1.98
SNRPA1-209ENST00000560307 PRO2289Q9P1D8 64 aa2.65□□□□□ -1.99
SNRPA1-209ENST00000560307 TNP1P09430 55 aa2.63□□□□□ -1.99
SNRPA1-209ENST00000560307 MT1HL1P0DM35 61 aa2.63□□□□□ -1.99
SNRPA1-209ENST00000560307 INE1O15225 51 aa2.62□□□□□ -1.99
SNRPA1-209ENST00000560307 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
SNRPA1-209ENST00000560307 KRTAP21-3Q3LHN1 58 aa2.59□□□□□ -1.99
SNRPA1-209ENST00000560307 FLGP20930 4061 aaPredicted RBP2.58□□□□□ -2
SNRPA1-209ENST00000560307 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
SNRPA1-209ENST00000560307 HERC1Q15751 4861 aa2.53□□□□□ -2
SNRPA1-209ENST00000560307 RYR2Q92736 4967 aa2.52□□□□□ -2.01
SNRPA1-209ENST00000560307 MUC17Q685J3 4493 aa2.52□□□□□ -2.01
SNRPA1-209ENST00000560307 KRTAP19-2Q3LHN2 52 aa2.52□□□□□ -2.01
SNRPA1-209ENST00000560307 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
SNRPA1-209ENST00000560307 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
SNRPA1-209ENST00000560307 RYR1P21817 5038 aa2.48□□□□□ -2.01
SNRPA1-209ENST00000560307 LRP2P98164 4655 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms