RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 CENPEQ02224 2701 aa2.65□□□□□ -1.99
PCNX1-214ENST00000556849 BAHCC1Q9P281 2608 aa2.65□□□□□ -1.99
PCNX1-214ENST00000556849 TENM3Q9P273 2699 aa2.64□□□□□ -1.99
PCNX1-214ENST00000556849 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
PCNX1-214ENST00000556849 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
PCNX1-214ENST00000556849 FAM208BQ5VWN6 2430 aa2.62□□□□□ -1.99
PCNX1-214ENST00000556849 DNAH7Q8WXX0 4024 aa2.62□□□□□ -1.99
PCNX1-214ENST00000556849 J3QKU1 62 aa2.62□□□□□ -1.99
PCNX1-214ENST00000556849 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
PCNX1-214ENST00000556849 PP632Q6XCG6 107 aa2.62□□□□□ -1.99
PCNX1-214ENST00000556849 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
PCNX1-214ENST00000556849 HELZ2Q9BYK8 2649 aaKnown RBP2.62□□□□□ -1.99
PCNX1-214ENST00000556849 MEGF8Q7Z7M0 2845 aa2.61□□□□□ -1.99
PCNX1-214ENST00000556849 SACSQ9NZJ4 4579 aa2.61□□□□□ -1.99
PCNX1-214ENST00000556849 IGSF10Q6WRI0 2623 aa2.61□□□□□ -1.99
PCNX1-214ENST00000556849 DNAH2Q9P225 4427 aa2.6□□□□□ -1.99
PCNX1-214ENST00000556849 CMYA5Q8N3K9 4069 aa2.59□□□□□ -1.99
PCNX1-214ENST00000556849 DNAH11Q96DT5 4516 aa2.59□□□□□ -1.99
PCNX1-214ENST00000556849 DNAH6Q9C0G6 4158 aa2.59□□□□□ -1.99
PCNX1-214ENST00000556849 MYO18BQ8IUG5 2567 aa2.59□□□□□ -1.99
PCNX1-214ENST00000556849 HECTD4Q9Y4D8 3996 aa2.58□□□□□ -2
PCNX1-214ENST00000556849 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
PCNX1-214ENST00000556849 R4GN34 69 aa2.58□□□□□ -2
PCNX1-214ENST00000556849 CSMD3Q7Z407 3707 aa2.58□□□□□ -2
PCNX1-214ENST00000556849 ACANP16112 2415 aa2.57□□□□□ -2
PCNX1-214ENST00000556849 C9orf92A6NGG3 77 aa2.57□□□□□ -2
PCNX1-214ENST00000556849 PRO2289Q9P1D8 64 aa2.57□□□□□ -2
PCNX1-214ENST00000556849 TEP1Q99973 2627 aaKnown RBP2.57□□□□□ -2
PCNX1-214ENST00000556849 MAST4O15021 2626 aa2.56□□□□□ -2
PCNX1-214ENST00000556849 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
PCNX1-214ENST00000556849 TGP01266 2768 aa2.56□□□□□ -2
PCNX1-214ENST00000556849 PLECQ15149 4684 aaKnown RBP2.56□□□□□ -2
PCNX1-214ENST00000556849 TENM1Q9UKZ4 2725 aa2.55□□□□□ -2
PCNX1-214ENST00000556849 CACNA1AO00555 2505 aa2.55□□□□□ -2
PCNX1-214ENST00000556849 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
PCNX1-214ENST00000556849 KRTAP10-1P60331 282 aa2.54□□□□□ -2
PCNX1-214ENST00000556849 FASNP49327 2511 aaKnown RBP2.53□□□□□ -2
PCNX1-214ENST00000556849 COL7A1Q02388 2944 aa2.53□□□□□ -2
PCNX1-214ENST00000556849 FLNBO75369 2602 aaKnown RBP2.52□□□□□ -2.01
PCNX1-214ENST00000556849 ATRQ13535 2644 aa2.51□□□□□ -2.01
PCNX1-214ENST00000556849 NBEAL1Q6ZS30 2694 aa2.5□□□□□ -2.01
PCNX1-214ENST00000556849 INE1O15225 51 aa2.5□□□□□ -2.01
PCNX1-214ENST00000556849 NSD1Q96L73 2696 aaPredicted RBP2.5□□□□□ -2.01
PCNX1-214ENST00000556849 STAB2Q8WWQ8 2551 aa2.5□□□□□ -2.01
PCNX1-214ENST00000556849 DNAH5Q8TE73 4624 aa2.49□□□□□ -2.01
PCNX1-214ENST00000556849 KRTAP10-12P60413 245 aa2.49□□□□□ -2.01
PCNX1-214ENST00000556849 ITPR2Q14571 2701 aa2.48□□□□□ -2.01
PCNX1-214ENST00000556849 LRP1BQ9NZR2 4599 aa2.48□□□□□ -2.01
PCNX1-214ENST00000556849 MYCBP2O75592 4640 aa2.48□□□□□ -2.01
PCNX1-214ENST00000556849 PKHD1L1Q86WI1 4243 aa2.48□□□□□ -2.01
PCNX1-214ENST00000556849 COL6A5A8TX70 2615 aa2.48□□□□□ -2.01
PCNX1-214ENST00000556849 KRTAP10-8P60410 259 aa2.47□□□□□ -2.01
PCNX1-214ENST00000556849 A0A1B0GVY2 172 aa2.46□□□□□ -2.02
PCNX1-214ENST00000556849 NOTCH1P46531 2555 aa2.45□□□□□ -2.02
PCNX1-214ENST00000556849 FBN3Q75N90 2809 aa2.45□□□□□ -2.02
PCNX1-214ENST00000556849 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
PCNX1-214ENST00000556849 USP24Q9UPU5 2620 aa2.45□□□□□ -2.02
PCNX1-214ENST00000556849 KMT2AQ03164 3969 aa2.44□□□□□ -2.02
PCNX1-214ENST00000556849 STARD9Q9P2P6 4700 aa2.43□□□□□ -2.02
PCNX1-214ENST00000556849 KRTAP10-4P60372 401 aaPredicted RBP2.42□□□□□ -2.02
PCNX1-214ENST00000556849 LCE3CQ5T5A8 94 aa2.42□□□□□ -2.02
PCNX1-214ENST00000556849 LRP1Q07954 4544 aaKnown RBP2.42□□□□□ -2.02
PCNX1-214ENST00000556849 APOBP04114 4563 aaKnown RBP2.4□□□□□ -2.03
PCNX1-214ENST00000556849 PKHD1P08F94 4074 aa2.4□□□□□ -2.03
PCNX1-214ENST00000556849 DYNC1H1Q14204 4646 aaKnown RBP2.39□□□□□ -2.03
PCNX1-214ENST00000556849 VPS13BQ7Z7G8 4022 aa2.39□□□□□ -2.03
PCNX1-214ENST00000556849 Q5VSD8 79 aa2.38□□□□□ -2.03
PCNX1-214ENST00000556849 PKD1P98161 4303 aa2.37□□□□□ -2.03
PCNX1-214ENST00000556849 DMBT1Q9UGM3 2413 aaPredicted RBP2.36□□□□□ -2.03
PCNX1-214ENST00000556849 FAT3Q8TDW7 4589 aa2.35□□□□□ -2.03
PCNX1-214ENST00000556849 FAT2Q9NYQ8 4349 aa2.35□□□□□ -2.03
PCNX1-214ENST00000556849 TNXBP22105 4242 aa2.35□□□□□ -2.03
PCNX1-214ENST00000556849 MGAM2Q2M2H8 2515 aa2.35□□□□□ -2.03
PCNX1-214ENST00000556849 HSPG2P98160 4391 aa2.34□□□□□ -2.03
PCNX1-214ENST00000556849 TNP1P09430 55 aa2.34□□□□□ -2.03
PCNX1-214ENST00000556849 STAB1Q9NY15 2570 aa2.33□□□□□ -2.04
PCNX1-214ENST00000556849 FAT1Q14517 4588 aa2.32□□□□□ -2.04
PCNX1-214ENST00000556849 SMR3BP02814 79 aaPredicted RBP2.29□□□□□ -2.04
PCNX1-214ENST00000556849 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
PCNX1-214ENST00000556849 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
PCNX1-214ENST00000556849 KRTAP10-5P60370 271 aa2.23□□□□□ -2.05
PCNX1-214ENST00000556849 DNHD1Q96M86 4753 aa2.21□□□□□ -2.06
PCNX1-214ENST00000556849 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
PCNX1-214ENST00000556849 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
PCNX1-214ENST00000556849 HERC1Q15751 4861 aa2.17□□□□□ -2.06
PCNX1-214ENST00000556849 MT1HL1P0DM35 61 aa2.17□□□□□ -2.06
PCNX1-214ENST00000556849 KRTAP8-1Q8IUC2 63 aa2.17□□□□□ -2.06
PCNX1-214ENST00000556849 HYDINQ4G0P3 5121 aa2.17□□□□□ -2.06
PCNX1-214ENST00000556849 FLGP20930 4061 aaPredicted RBP2.16□□□□□ -2.06
PCNX1-214ENST00000556849 KRTAP19-2Q3LHN2 52 aa2.14□□□□□ -2.07
PCNX1-214ENST00000556849 KRTAP10-10P60014 251 aa2.11□□□□□ -2.07
PCNX1-214ENST00000556849 LCE3AQ5TA76 89 aa2.11□□□□□ -2.07
PCNX1-214ENST00000556849 SPRR2GQ9BYE4 73 aa2.09□□□□□ -2.07
PCNX1-214ENST00000556849 MUC17Q685J3 4493 aa2.06□□□□□ -2.08
PCNX1-214ENST00000556849 KRTAP9-6A8MVA2 160 aa2.05□□□□□ -2.08
PCNX1-214ENST00000556849 RYR2Q92736 4967 aa2.04□□□□□ -2.08
PCNX1-214ENST00000556849 KRTAP4-1Q9BYQ7 146 aa2.04□□□□□ -2.08
PCNX1-214ENST00000556849 LRP2P98164 4655 aa2.03□□□□□ -2.08
PCNX1-214ENST00000556849 LPAP08519 4548 aa2.03□□□□□ -2.08
PCNX1-214ENST00000556849 KRTAP12-3P60328 96 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms