RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 DEFB110Q30KQ9 67 aa-0.22□□□□□ -2.44
KTN1-222ENST00000555506 ABRACLQ9P1F3 81 aa-0.22□□□□□ -2.44
KTN1-222ENST00000555506 EFCAB6Q5THR3 1501 aa-0.22□□□□□ -2.44
KTN1-222ENST00000555506 TLN2Q9Y4G6 2542 aa-0.22□□□□□ -2.44
KTN1-222ENST00000555506 WDR87Q6ZQQ6 2873 aa-0.22□□□□□ -2.44
KTN1-222ENST00000555506 USP9XQ93008 2570 aaPredicted RBP-0.22□□□□□ -2.45
KTN1-222ENST00000555506 NRXN3Q9Y4C0 1643 aa-0.22□□□□□ -2.45
KTN1-222ENST00000555506 FANCD2Q9BXW9 1451 aa-0.22□□□□□ -2.45
KTN1-222ENST00000555506 LMO7Q8WWI1 1683 aa-0.23□□□□□ -2.45
KTN1-222ENST00000555506 USH2AO75445 5202 aa-0.23□□□□□ -2.45
KTN1-222ENST00000555506 PLNP26678 52 aa-0.23□□□□□ -2.45
KTN1-222ENST00000555506 KIF21BO75037 1637 aa-0.24□□□□□ -2.45
KTN1-222ENST00000555506 ABCA5Q8WWZ7 1642 aa-0.24□□□□□ -2.45
KTN1-222ENST00000555506 KRTAP19-8Q3LI54 63 aa-0.25□□□□□ -2.45
KTN1-222ENST00000555506 TRIOO75962 3097 aa-0.25□□□□□ -2.45
KTN1-222ENST00000555506 MUC17Q685J3 4493 aa-0.25□□□□□ -2.45
KTN1-222ENST00000555506 ABCC8Q09428 1581 aa-0.25□□□□□ -2.45
KTN1-222ENST00000555506 HERC1Q15751 4861 aa-0.25□□□□□ -2.45
KTN1-222ENST00000555506 SMIM27A0A1W2PRY6 76 aa-0.26□□□□□ -2.45
KTN1-222ENST00000555506 ITPR3Q14573 2671 aa-0.26□□□□□ -2.45
KTN1-222ENST00000555506 TNP1P09430 55 aa-0.27□□□□□ -2.45
KTN1-222ENST00000555506 KAAG1Q9UBP8 84 aa-0.27□□□□□ -2.45
KTN1-222ENST00000555506 FAM208AQ9UK61 1670 aaKnown RBP-0.27□□□□□ -2.45
KTN1-222ENST00000555506 EPPK1P58107 5090 aaKnown RBP-0.27□□□□□ -2.45
KTN1-222ENST00000555506 CMC2Q9NRP2 79 aa-0.28□□□□□ -2.45
KTN1-222ENST00000555506 COL6A5A8TX70 2615 aa-0.28□□□□□ -2.45
KTN1-222ENST00000555506 RELNP78509 3460 aa-0.28□□□□□ -2.45
KTN1-222ENST00000555506 DNAH7Q8WXX0 4024 aa-0.3□□□□□ -2.46
KTN1-222ENST00000555506 M0QY20 66 aa-0.3□□□□□ -2.46
KTN1-222ENST00000555506 CELSR3Q9NYQ7 3312 aa-0.3□□□□□ -2.46
KTN1-222ENST00000555506 IQGAP1P46940 1657 aa-0.31□□□□□ -2.46
KTN1-222ENST00000555506 A8MTW9 85 aa-0.31□□□□□ -2.46
KTN1-222ENST00000555506 WFDC10BQ8IUB3 73 aa-0.31□□□□□ -2.46
KTN1-222ENST00000555506 LINC01546A6NGU7 62 aa-0.32□□□□□ -2.46
KTN1-222ENST00000555506 M0QZ58 72 aa-0.32□□□□□ -2.46
KTN1-222ENST00000555506 KRTAP19-5Q3LI72 72 aa-0.32□□□□□ -2.46
KTN1-222ENST00000555506 FRYQ5TBA9 3013 aa-0.32□□□□□ -2.46
KTN1-222ENST00000555506 DDX60Q8IY21 1712 aaKnown RBP-0.33□□□□□ -2.46
KTN1-222ENST00000555506 HERC2O95714 4834 aa-0.33□□□□□ -2.46
KTN1-222ENST00000555506 TFF3Q07654 80 aa-0.33□□□□□ -2.46
KTN1-222ENST00000555506 CLPSL2Q6UWE3 100 aa-0.33□□□□□ -2.46
KTN1-222ENST00000555506 SNRPGP15A8MWD9 76 aa-0.34□□□□□ -2.46
KTN1-222ENST00000555506 USP9YO00507 2555 aaPredicted RBP-0.34□□□□□ -2.46
KTN1-222ENST00000555506 PLECQ15149 4684 aaKnown RBP-0.34□□□□□ -2.46
KTN1-222ENST00000555506 KRTAP20-2Q3LI61 65 aa-0.35□□□□□ -2.46
KTN1-222ENST00000555506 KRTAP8-1Q8IUC2 63 aa-0.36□□□□□ -2.47
KTN1-222ENST00000555506 C5orf42Q9H799 3197 aa-0.37□□□□□ -2.47
KTN1-222ENST00000555506 MT4P47944 62 aa-0.37□□□□□ -2.47
KTN1-222ENST00000555506 DEFB1P60022 68 aa-0.37□□□□□ -2.47
KTN1-222ENST00000555506 SPTAN1Q13813 2472 aaKnown RBP-0.37□□□□□ -2.47
KTN1-222ENST00000555506 NFAT5O94916 1531 aa-0.38□□□□□ -2.47
KTN1-222ENST00000555506 SMIM2Q9BVW6 85 aa-0.38□□□□□ -2.47
KTN1-222ENST00000555506 CHD7Q9P2D1 2997 aa-0.38□□□□□ -2.47
KTN1-222ENST00000555506 ADGRG4Q8IZF6 3080 aa-0.39□□□□□ -2.47
KTN1-222ENST00000555506 MT1HP80294 61 aa-0.39□□□□□ -2.47
KTN1-222ENST00000555506 ITPR1Q14643 2758 aa-0.39□□□□□ -2.47
KTN1-222ENST00000555506 CMYA5Q8N3K9 4069 aa-0.39□□□□□ -2.47
KTN1-222ENST00000555506 DNAH10Q8IVF4 4471 aa-0.4□□□□□ -2.47
KTN1-222ENST00000555506 SMR3BP02814 79 aaPredicted RBP-0.4□□□□□ -2.47
KTN1-222ENST00000555506 DEFB131AP59861 70 aa-0.4□□□□□ -2.47
KTN1-222ENST00000555506 TEX15Q9BXT5 2789 aa-0.41□□□□□ -2.48
KTN1-222ENST00000555506 SPART-AS1P0CW21 52 aa-0.42□□□□□ -2.48
KTN1-222ENST00000555506 DYNC1H1Q14204 4646 aaKnown RBP-0.43□□□□□ -2.48
KTN1-222ENST00000555506 LAMA2P24043 3122 aaKnown RBP-0.43□□□□□ -2.48
KTN1-222ENST00000555506 TRPM2O94759 1503 aa-0.44□□□□□ -2.48
KTN1-222ENST00000555506 SRCAPQ6ZRS2 3230 aa-0.44□□□□□ -2.48
KTN1-222ENST00000555506 DNAH17Q9UFH2 4485 aa-0.45□□□□□ -2.48
KTN1-222ENST00000555506 MGAQ8IWI9 3026 aa-0.46□□□□□ -2.48
KTN1-222ENST00000555506 LRBAP50851 2863 aa-0.46□□□□□ -2.48
KTN1-222ENST00000555506 BIRC6Q9NR09 4857 aa-0.47□□□□□ -2.48
KTN1-222ENST00000555506 CLTCL1P53675 1640 aa-0.47□□□□□ -2.48
KTN1-222ENST00000555506 CSMD1Q96PZ7 3565 aa-0.47□□□□□ -2.49
KTN1-222ENST00000555506 DNHD1Q96M86 4753 aa-0.49□□□□□ -2.49
KTN1-222ENST00000555506 LAMA3Q16787 3333 aa-0.49□□□□□ -2.49
KTN1-222ENST00000555506 NDUFA1O15239 70 aa-0.49□□□□□ -2.49
KTN1-222ENST00000555506 ZFHX4Q86UP3 3567 aa-0.49□□□□□ -2.49
KTN1-222ENST00000555506 IQGAP2Q13576 1575 aa-0.5□□□□□ -2.49
KTN1-222ENST00000555506 MYO9AB2RTY4 2548 aa-0.5□□□□□ -2.49
KTN1-222ENST00000555506 CRYBG3Q68DQ2 2970 aa-0.51□□□□□ -2.49
KTN1-222ENST00000555506 POLR2KP53803 58 aaKnown RBP-0.51□□□□□ -2.49
KTN1-222ENST00000555506 MT1EP04732 61 aa-0.53□□□□□ -2.49
KTN1-222ENST00000555506 CFAP46Q8IYW2 2715 aa-0.54□□□□□ -2.5
KTN1-222ENST00000555506 NIPBLQ6KC79 2804 aaeCLIP-0.54□□□□□ -2.5
KTN1-222ENST00000555506 MT1XP80297 61 aa-0.54□□□□□ -2.5
KTN1-222ENST00000555506 DMXL2Q8TDJ6 3036 aa-0.55□□□□□ -2.5
KTN1-222ENST00000555506 TOMM5Q8N4H5 51 aa-0.56□□□□□ -2.5
KTN1-222ENST00000555506 MT1LQ93083 61 aa-0.58□□□□□ -2.5
KTN1-222ENST00000555506 TRRAPQ9Y4A5 3859 aa-0.59□□□□□ -2.5
KTN1-222ENST00000555506 EYSQ5T1H1 3165 aa-0.6□□□□□ -2.51
KTN1-222ENST00000555506 ATP7AQ04656 1500 aa-0.61□□□□□ -2.51
KTN1-222ENST00000555506 DNAH5Q8TE73 4624 aa-0.63□□□□□ -2.51
KTN1-222ENST00000555506 LEAP2Q969E1 77 aa-0.63□□□□□ -2.51
KTN1-222ENST00000555506 CEP295Q9C0D2 2601 aa-0.64□□□□□ -2.51
KTN1-222ENST00000555506 ITPR2Q14571 2701 aa-0.65□□□□□ -2.51
KTN1-222ENST00000555506 CSMD2Q7Z408 3487 aa-0.66□□□□□ -2.52
KTN1-222ENST00000555506 SAMD9LQ8IVG5 1584 aa-0.66□□□□□ -2.52
KTN1-222ENST00000555506 CFAP54Q96N23 3096 aa-0.67□□□□□ -2.52
KTN1-222ENST00000555506 TLN1Q9Y490 2541 aaKnown RBP-0.67□□□□□ -2.52
KTN1-222ENST00000555506 PRUNE2Q8WUY3 3088 aa-0.68□□□□□ -2.52
KTN1-222ENST00000555506 SMG1Q96Q15 3661 aaKnown RBP-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms