RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 AEBP2Q6ZN18 517 aaPredicted RBP25.13■■□□□ 1.61
KTN1-222ENST00000555506 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
KTN1-222ENST00000555506 SENP3Q9H4L4 574 aaPredicted RBP21.74■■□□□ 1.07
KTN1-222ENST00000555506 POTEDQ86YR6 584 aa21.52■■□□□ 1.03
KTN1-222ENST00000555506 PHF23Q9BUL5 403 aaPredicted RBP21.22■□□□□ 0.99
KTN1-222ENST00000555506 FOXD1Q16676 465 aa20.38■□□□□ 0.85
KTN1-222ENST00000555506 MSH5O43196 834 aa19.67■□□□□ 0.74
KTN1-222ENST00000555506 PIAS4Q8N2W9 510 aaPredicted RBP18.7■□□□□ 0.58
KTN1-222ENST00000555506 PPP6R1Q9UPN7 881 aa17.95■□□□□ 0.46
KTN1-222ENST00000555506 PLPPR3Q6T4P5 718 aa17.92■□□□□ 0.46
KTN1-222ENST00000555506 ADRA2BP18089 450 aa17.88■□□□□ 0.45
KTN1-222ENST00000555506 CACNB1Q02641 598 aaPredicted RBP17.69■□□□□ 0.42
KTN1-222ENST00000555506 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
KTN1-222ENST00000555506 MAPK8IP2Q13387 824 aaPredicted RBP16.77■□□□□ 0.28
KTN1-222ENST00000555506 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.26
KTN1-222ENST00000555506 RNF39Q9H2S5 420 aa16.62■□□□□ 0.25
KTN1-222ENST00000555506 POTEHQ6S545 545 aa16.59■□□□□ 0.25
KTN1-222ENST00000555506 C1QBPQ07021 282 aaKnown RBP16.34■□□□□ 0.21
KTN1-222ENST00000555506 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
KTN1-222ENST00000555506 HOXD11P31277 338 aaPredicted RBP15.86■□□□□ 0.13
KTN1-222ENST00000555506 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
KTN1-222ENST00000555506 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
KTN1-222ENST00000555506 PPP4R3CPQ6ZMV5 832 aa15.52■□□□□ 0.08
KTN1-222ENST00000555506 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
KTN1-222ENST00000555506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.21■□□□□ 0.031e-6■□□□□ 8.9
KTN1-222ENST00000555506 DSG3P32926 999 aa15.08■□□□□ 0.01
KTN1-222ENST00000555506 SP7Q8TDD2 431 aaPredicted RBP14.9□□□□□ -0.02
KTN1-222ENST00000555506 KCNA4P22459 653 aa14.87□□□□□ -0.03
KTN1-222ENST00000555506 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
KTN1-222ENST00000555506 CAPN15O75808 1086 aa14.83□□□□□ -0.03
KTN1-222ENST00000555506 SPINK5Q9NQ38 1064 aaPredicted RBP14.76□□□□□ -0.05
KTN1-222ENST00000555506 NPM3O75607 178 aaKnown RBP14.7□□□□□ -0.06
KTN1-222ENST00000555506 CHRDL2Q6WN34 429 aa14.67□□□□□ -0.06
KTN1-222ENST00000555506 U3KPZ7 1027 aaPredicted RBP14.64□□□□□ -0.07
KTN1-222ENST00000555506 RBM42Q9BTD8 480 aaKnown RBP14.49□□□□□ -0.09
KTN1-222ENST00000555506 APLP2Q06481 763 aa14.46□□□□□ -0.09
KTN1-222ENST00000555506 ZNF219Q9P2Y4 722 aaPredicted RBP14.38□□□□□ -0.11
KTN1-222ENST00000555506 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
KTN1-222ENST00000555506 ABCB7O75027 752 aa14.32□□□□□ -0.12
KTN1-222ENST00000555506 PLSCR2Q9NRY7 297 aa14.22□□□□□ -0.13
KTN1-222ENST00000555506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.18□□□□□ -0.14
KTN1-222ENST00000555506 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
KTN1-222ENST00000555506 HAX1O00165 279 aa14.14□□□□□ -0.15
KTN1-222ENST00000555506 SLC4A1APQ9BWU0 796 aaKnown RBP14.08□□□□□ -0.16
KTN1-222ENST00000555506 PIP4P2Q8N4L2 257 aa14.01□□□□□ -0.17
KTN1-222ENST00000555506 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
KTN1-222ENST00000555506 LHX8Q68G74 356 aa13.97□□□□□ -0.17
KTN1-222ENST00000555506 SLC4A2P04920 1241 aa13.94□□□□□ -0.18
KTN1-222ENST00000555506 AKT1S1Q96B36 256 aa13.85□□□□□ -0.19
KTN1-222ENST00000555506 EVX2Q03828 476 aa13.82□□□□□ -0.2
KTN1-222ENST00000555506 POLA2Q14181 598 aa13.77□□□□□ -0.21
KTN1-222ENST00000555506 FXR2P51116 673 aaKnown RBP eCLIP13.74□□□□□ -0.212e-7■□□□□ 10.5
KTN1-222ENST00000555506 ZBTB22O15209 634 aa13.7□□□□□ -0.22
KTN1-222ENST00000555506 REM2Q8IYK8 340 aaPredicted RBP13.68□□□□□ -0.22
KTN1-222ENST00000555506 FOXD4L1Q9NU39 408 aa13.68□□□□□ -0.22
KTN1-222ENST00000555506 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
KTN1-222ENST00000555506 MYCNP04198 464 aaPredicted RBP13.55□□□□□ -0.24
KTN1-222ENST00000555506 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
KTN1-222ENST00000555506 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
KTN1-222ENST00000555506 GABBR2O75899 941 aa13.48□□□□□ -0.25
KTN1-222ENST00000555506 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
KTN1-222ENST00000555506 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
KTN1-222ENST00000555506 OSCARQ8IYS5 282 aa13.31□□□□□ -0.28
KTN1-222ENST00000555506 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
KTN1-222ENST00000555506 POTEMA6NI47 508 aa13.2□□□□□ -0.3
KTN1-222ENST00000555506 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
KTN1-222ENST00000555506 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
KTN1-222ENST00000555506 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
KTN1-222ENST00000555506 PCDH10Q9P2E7 1040 aa13.16□□□□□ -0.3
KTN1-222ENST00000555506 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
KTN1-222ENST00000555506 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
KTN1-222ENST00000555506 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
KTN1-222ENST00000555506 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
KTN1-222ENST00000555506 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
KTN1-222ENST00000555506 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
KTN1-222ENST00000555506 OTUD5Q96G74 571 aa12.94□□□□□ -0.34
KTN1-222ENST00000555506 CLCN6P51797 869 aa12.9□□□□□ -0.34
KTN1-222ENST00000555506 FBLN2P98095 1184 aa12.85□□□□□ -0.35
KTN1-222ENST00000555506 DCBLD2Q96PD2 775 aa12.83□□□□□ -0.36
KTN1-222ENST00000555506 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
KTN1-222ENST00000555506 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
KTN1-222ENST00000555506 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
KTN1-222ENST00000555506 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
KTN1-222ENST00000555506 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
KTN1-222ENST00000555506 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
KTN1-222ENST00000555506 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
KTN1-222ENST00000555506 LCE2DQ5TA82 110 aaPredicted RBP12.53□□□□□ -0.4
KTN1-222ENST00000555506 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
KTN1-222ENST00000555506 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
KTN1-222ENST00000555506 FAM163AQ96GL9 167 aaPredicted RBP12.44□□□□□ -0.42
KTN1-222ENST00000555506 PABPN1Q86U42 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
KTN1-222ENST00000555506 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
KTN1-222ENST00000555506 MAMSTRQ6ZN01 415 aa12.36□□□□□ -0.43
KTN1-222ENST00000555506 CDAN1Q8IWY9 1227 aa12.34□□□□□ -0.43
KTN1-222ENST00000555506 GALR2O43603 387 aaPredicted RBP12.34□□□□□ -0.43
KTN1-222ENST00000555506 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
KTN1-222ENST00000555506 POTEJP0CG39 1038 aa12.27□□□□□ -0.44
KTN1-222ENST00000555506 PAK3O75914 559 aaPredicted RBP12.23□□□□□ -0.45
KTN1-222ENST00000555506 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
KTN1-222ENST00000555506 MMRN1Q13201 1228 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms