RNA–Protein interactions for RNA: ENST00000553360.5

KTN1-209, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 993 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-209ENST00000553360 SRCAPQ6ZRS2 3230 aa0.6□□□□□ -2.31
KTN1-209ENST00000553360 HRNRQ86YZ3 2850 aaPredicted RBP0.6□□□□□ -2.31
KTN1-209ENST00000553360 SPTAN1Q13813 2472 aaKnown RBP0.6□□□□□ -2.31
KTN1-209ENST00000553360 FREM2Q5SZK8 3169 aa0.6□□□□□ -2.31
KTN1-209ENST00000553360 UTP20O75691 2785 aaKnown RBP0.6□□□□□ -2.31
KTN1-209ENST00000553360 ZFYVE26Q68DK2 2539 aa0.6□□□□□ -2.31
KTN1-209ENST00000553360 HSPG2P98160 4391 aa0.6□□□□□ -2.31
KTN1-209ENST00000553360 TNP1P09430 55 aa0.6□□□□□ -2.31
KTN1-209ENST00000553360 DEFB124Q8NES8 71 aa0.6□□□□□ -2.31
KTN1-209ENST00000553360 PKD1P98161 4303 aa0.6□□□□□ -2.31
KTN1-209ENST00000553360 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
KTN1-209ENST00000553360 ADGRG4Q8IZF6 3080 aa0.6□□□□□ -2.31
KTN1-209ENST00000553360 WDFY4Q6ZS81 3184 aa0.59□□□□□ -2.31
KTN1-209ENST00000553360 CFAP46Q8IYW2 2715 aa0.59□□□□□ -2.31
KTN1-209ENST00000553360 LAMA1P25391 3075 aa0.59□□□□□ -2.31
KTN1-209ENST00000553360 ANKHD1Q8IWZ3 2542 aaKnown RBP0.59□□□□□ -2.31
KTN1-209ENST00000553360 VPS13AQ96RL7 3174 aa0.59□□□□□ -2.31
KTN1-209ENST00000553360 DEFB135Q30KP9 77 aa0.59□□□□□ -2.31
KTN1-209ENST00000553360 SMR3AQ99954 134 aa0.59□□□□□ -2.31
KTN1-209ENST00000553360 Q9Y3F1 56 aa0.59□□□□□ -2.31
KTN1-209ENST00000553360 VPS13BQ7Z7G8 4022 aa0.59□□□□□ -2.32
KTN1-209ENST00000553360 PKHD1L1Q86WI1 4243 aa0.59□□□□□ -2.32
KTN1-209ENST00000553360 FAT3Q8TDW7 4589 aa0.59□□□□□ -2.32
KTN1-209ENST00000553360 DCHS1Q96JQ0 3298 aa0.59□□□□□ -2.32
KTN1-209ENST00000553360 DOPEY1Q5JWR5 2465 aa0.59□□□□□ -2.32
KTN1-209ENST00000553360 FRAS1Q86XX4 4008 aa0.59□□□□□ -2.32
KTN1-209ENST00000553360 CSMD1Q96PZ7 3565 aa0.58□□□□□ -2.32
KTN1-209ENST00000553360 USP9XQ93008 2570 aaPredicted RBP0.58□□□□□ -2.32
KTN1-209ENST00000553360 SPEGQ15772 3267 aa0.58□□□□□ -2.32
KTN1-209ENST00000553360 ACACBO00763 2458 aa0.58□□□□□ -2.32
KTN1-209ENST00000553360 ANKRD11Q6UB99 2663 aaPredicted RBP0.58□□□□□ -2.32
KTN1-209ENST00000553360 GCN1Q92616 2671 aaKnown RBP0.58□□□□□ -2.32
KTN1-209ENST00000553360 DNAH9Q9NYC9 4486 aa0.58□□□□□ -2.32
KTN1-209ENST00000553360 GOLGB1Q14789 3259 aaKnown RBP0.58□□□□□ -2.32
KTN1-209ENST00000553360 H3BNG1 76 aa0.58□□□□□ -2.32
KTN1-209ENST00000553360 CD52P31358 61 aa0.58□□□□□ -2.32
KTN1-209ENST00000553360 HUWE1Q7Z6Z7 4374 aaKnown RBP0.58□□□□□ -2.32
KTN1-209ENST00000553360 LAMA5O15230 3695 aa0.58□□□□□ -2.32
KTN1-209ENST00000553360 STAB1Q9NY15 2570 aa0.58□□□□□ -2.32
KTN1-209ENST00000553360 DNAH1Q9P2D7 4330 aa0.57□□□□□ -2.32
KTN1-209ENST00000553360 DNAH7Q8WXX0 4024 aa0.57□□□□□ -2.32
KTN1-209ENST00000553360 C9orf92A6NGG3 77 aa0.57□□□□□ -2.32
KTN1-209ENST00000553360 M0R2T5 61 aa0.57□□□□□ -2.32
KTN1-209ENST00000553360 LINC01556Q5JQF7 62 aa0.57□□□□□ -2.32
KTN1-209ENST00000553360 CUBNO60494 3623 aa0.57□□□□□ -2.32
KTN1-209ENST00000553360 UTRNP46939 3433 aa0.57□□□□□ -2.32
KTN1-209ENST00000553360 MXRA5Q9NR99 2828 aa0.57□□□□□ -2.32
KTN1-209ENST00000553360 ASPMQ8IZT6 3477 aa0.57□□□□□ -2.32
KTN1-209ENST00000553360 APOBP04114 4563 aaKnown RBP0.56□□□□□ -2.32
KTN1-209ENST00000553360 ITPR2Q14571 2701 aa0.56□□□□□ -2.32
KTN1-209ENST00000553360 TEX15Q9BXT5 2789 aa0.56□□□□□ -2.32
KTN1-209ENST00000553360 KRTAP8-1Q8IUC2 63 aa0.56□□□□□ -2.32
KTN1-209ENST00000553360 HIVEP1P15822 2718 aa0.56□□□□□ -2.32
KTN1-209ENST00000553360 SVEP1Q4LDE5 3571 aa0.56□□□□□ -2.32
KTN1-209ENST00000553360 AHNAKQ09666 5890 aaKnown RBP0.56□□□□□ -2.32
KTN1-209ENST00000553360 MYO18BQ8IUG5 2567 aa0.55□□□□□ -2.32
KTN1-209ENST00000553360 DNAH17Q9UFH2 4485 aa0.55□□□□□ -2.32
KTN1-209ENST00000553360 XIRP2A4UGR9 3374 aa0.55□□□□□ -2.32
KTN1-209ENST00000553360 PCNTO95613 3336 aa0.55□□□□□ -2.32
KTN1-209ENST00000553360 MUC3AQ02505 3323 aa0.55□□□□□ -2.32
KTN1-209ENST00000553360 CENPEQ02224 2701 aa0.55□□□□□ -2.32
KTN1-209ENST00000553360 CSMD2Q7Z408 3487 aa0.55□□□□□ -2.32
KTN1-209ENST00000553360 NSD1Q96L73 2696 aaPredicted RBP0.54□□□□□ -2.32
KTN1-209ENST00000553360 TGP01266 2768 aa0.54□□□□□ -2.32
KTN1-209ENST00000553360 EP400Q96L91 3159 aa0.54□□□□□ -2.32
KTN1-209ENST00000553360 CACNA1AO00555 2505 aa0.54□□□□□ -2.32
KTN1-209ENST00000553360 TLN2Q9Y4G6 2542 aa0.54□□□□□ -2.32
KTN1-209ENST00000553360 USP34Q70CQ2 3546 aa0.54□□□□□ -2.32
KTN1-209ENST00000553360 FLGP20930 4061 aaPredicted RBP0.54□□□□□ -2.32
KTN1-209ENST00000553360 PLECQ15149 4684 aaKnown RBP0.53□□□□□ -2.32
KTN1-209ENST00000553360 LAMA2P24043 3122 aaKnown RBP0.53□□□□□ -2.32
KTN1-209ENST00000553360 FASNP49327 2511 aaKnown RBP0.53□□□□□ -2.32
KTN1-209ENST00000553360 KRTAP21-1Q3LI58 79 aa0.53□□□□□ -2.32
KTN1-209ENST00000553360 FLNAP21333 2647 aaKnown RBP0.53□□□□□ -2.32
KTN1-209ENST00000553360 HECTD4Q9Y4D8 3996 aa0.53□□□□□ -2.32
KTN1-209ENST00000553360 LRP1Q07954 4544 aaKnown RBP0.53□□□□□ -2.33
KTN1-209ENST00000553360 TRRAPQ9Y4A5 3859 aa0.53□□□□□ -2.33
KTN1-209ENST00000553360 LAMA3Q16787 3333 aa0.53□□□□□ -2.33
KTN1-209ENST00000553360 VCANP13611 3396 aa0.53□□□□□ -2.33
KTN1-209ENST00000553360 FAT1Q14517 4588 aa0.52□□□□□ -2.33
KTN1-209ENST00000553360 MACF1Q9UPN3 7388 aaKnown RBP0.52□□□□□ -2.33
KTN1-209ENST00000553360 DNAH5Q8TE73 4624 aa0.52□□□□□ -2.33
KTN1-209ENST00000553360 NIPBLQ6KC79 2804 aaeCLIP0.52□□□□□ -2.332e-7■■□□□ 13.4
KTN1-209ENST00000553360 TNXBP22105 4242 aa0.52□□□□□ -2.33
KTN1-209ENST00000553360 SMR3BP02814 79 aaPredicted RBP0.52□□□□□ -2.33
KTN1-209ENST00000553360 PRM1P04553 51 aa0.52□□□□□ -2.33
KTN1-209ENST00000553360 DEFB133Q30KQ1 61 aa0.52□□□□□ -2.33
KTN1-209ENST00000553360 TEP1Q99973 2627 aaKnown RBP0.52□□□□□ -2.33
KTN1-209ENST00000553360 NBEAL1Q6ZS30 2694 aa0.52□□□□□ -2.33
KTN1-209ENST00000553360 CMYA5Q8N3K9 4069 aa0.52□□□□□ -2.33
KTN1-209ENST00000553360 MAST4O15021 2626 aa0.51□□□□□ -2.33
KTN1-209ENST00000553360 FLNBO75369 2602 aaKnown RBP0.51□□□□□ -2.33
KTN1-209ENST00000553360 DNAH6Q9C0G6 4158 aa0.51□□□□□ -2.33
KTN1-209ENST00000553360 CENPFP49454 3210 aa0.51□□□□□ -2.33
KTN1-209ENST00000553360 UNC79Q9P2D8 2635 aa0.51□□□□□ -2.33
KTN1-209ENST00000553360 TLN1Q9Y490 2541 aaKnown RBP0.51□□□□□ -2.33
KTN1-209ENST00000553360 LOC400499M0QZD8 3231 aa0.51□□□□□ -2.33
KTN1-209ENST00000553360 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
KTN1-209ENST00000553360 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
KTN1-209ENST00000553360 RPS29P62273 56 aaKnown RBP0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms