RNA–Protein interactions for RNA: ENST00000553360.5

KTN1-209, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 993 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-209ENST00000553360 AEBP2Q6ZN18 517 aaPredicted RBP27.17■■□□□ 1.94
KTN1-209ENST00000553360 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
KTN1-209ENST00000553360 PHF23Q9BUL5 403 aaPredicted RBP23.34■■□□□ 1.33
KTN1-209ENST00000553360 SENP3Q9H4L4 574 aaPredicted RBP23.07■■□□□ 1.28
KTN1-209ENST00000553360 PLPPR3Q6T4P5 718 aa21.56■■□□□ 1.04
KTN1-209ENST00000553360 FOXD1Q16676 465 aa21.42■■□□□ 1.02
KTN1-209ENST00000553360 ADRA2BP18089 450 aa20.63■□□□□ 0.89
KTN1-209ENST00000553360 PPP6R1Q9UPN7 881 aa20.62■□□□□ 0.89
KTN1-209ENST00000553360 PIAS4Q8N2W9 510 aaPredicted RBP20.22■□□□□ 0.83
KTN1-209ENST00000553360 MSH5O43196 834 aa19.75■□□□□ 0.75
KTN1-209ENST00000553360 PPP4R3CPQ6ZMV5 832 aa19.01■□□□□ 0.63
KTN1-209ENST00000553360 SCAF1Q9H7N4 1312 aaKnown RBP18.87■□□□□ 0.61
KTN1-209ENST00000553360 MAPK8IP2Q13387 824 aaPredicted RBP18.72■□□□□ 0.59
KTN1-209ENST00000553360 KCNA4P22459 653 aa18.56■□□□□ 0.56
KTN1-209ENST00000553360 NCBP3Q53F19 620 aaKnown RBP18.52■□□□□ 0.56
KTN1-209ENST00000553360 CNKSR2Q8WXI2 1034 aa18.46■□□□□ 0.55
KTN1-209ENST00000553360 DMRT2Q9Y5R5 561 aa18.4■□□□□ 0.54
KTN1-209ENST00000553360 NPM3O75607 178 aaKnown RBP18.23■□□□□ 0.51
KTN1-209ENST00000553360 RNF216Q9NWF9 866 aaPredicted RBP18.09■□□□□ 0.49
KTN1-209ENST00000553360 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
KTN1-209ENST00000553360 HOXD11P31277 338 aaPredicted RBP18■□□□□ 0.47
KTN1-209ENST00000553360 DCAF8L1A6NGE4 600 aa17.72■□□□□ 0.43
KTN1-209ENST00000553360 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
KTN1-209ENST00000553360 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
KTN1-209ENST00000553360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.24■□□□□ 0.357e-7■■□□□ 12.4
KTN1-209ENST00000553360 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
KTN1-209ENST00000553360 SLC4A2P04920 1241 aa17.2■□□□□ 0.34
KTN1-209ENST00000553360 FOXD4L1Q9NU39 408 aa17.06■□□□□ 0.32
KTN1-209ENST00000553360 ZBTB22O15209 634 aa17.05■□□□□ 0.32
KTN1-209ENST00000553360 CSRNP3Q8WYN3 585 aa16.96■□□□□ 0.31
KTN1-209ENST00000553360 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
KTN1-209ENST00000553360 U3KPZ7 1027 aaPredicted RBP16.9■□□□□ 0.3
KTN1-209ENST00000553360 MYCNP04198 464 aaPredicted RBP16.83■□□□□ 0.28
KTN1-209ENST00000553360 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.27
KTN1-209ENST00000553360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
KTN1-209ENST00000553360 HNRNPUL2Q1KMD3 747 aaKnown RBP16.7■□□□□ 0.26
KTN1-209ENST00000553360 SAMD1Q6SPF0 538 aaPredicted RBP16.64■□□□□ 0.25
KTN1-209ENST00000553360 CACNB1Q02641 598 aaPredicted RBP16.55■□□□□ 0.24
KTN1-209ENST00000553360 APLP2Q06481 763 aa16.53■□□□□ 0.24
KTN1-209ENST00000553360 ATXN8OSP0DMR3 200 aa16.46■□□□□ 0.23
KTN1-209ENST00000553360 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
KTN1-209ENST00000553360 CAPN15O75808 1086 aa16.43■□□□□ 0.22
KTN1-209ENST00000553360 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
KTN1-209ENST00000553360 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
KTN1-209ENST00000553360 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
KTN1-209ENST00000553360 ABCB7O75027 752 aa16.12■□□□□ 0.17
KTN1-209ENST00000553360 DSG3P32926 999 aa16.1■□□□□ 0.17
KTN1-209ENST00000553360 POLA2Q14181 598 aa16.07■□□□□ 0.16
KTN1-209ENST00000553360 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
KTN1-209ENST00000553360 FBLN2P98095 1184 aa15.74■□□□□ 0.11
KTN1-209ENST00000553360 MKRN4PQ13434 485 aaPredicted RBP15.67■□□□□ 0.1
KTN1-209ENST00000553360 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
KTN1-209ENST00000553360 FKBP8Q14318 412 aa15.37■□□□□ 0.05
KTN1-209ENST00000553360 SPDYE4A6NLX3 237 aa15.35■□□□□ 0.05
KTN1-209ENST00000553360 RBM42Q9BTD8 480 aaKnown RBP15.34■□□□□ 0.05
KTN1-209ENST00000553360 SPDYE2BA6NHP3 402 aa15.33■□□□□ 0.04
KTN1-209ENST00000553360 SPDYE6P0CI01 402 aa15.33■□□□□ 0.04
KTN1-209ENST00000553360 SPDYE2Q495Y8 402 aa15.33■□□□□ 0.04
KTN1-209ENST00000553360 ZNF692Q9BU19 519 aaPredicted RBP15.33■□□□□ 0.04
KTN1-209ENST00000553360 SSUH2Q9Y2M2 353 aa15.19■□□□□ 0.02
KTN1-209ENST00000553360 AKT1S1Q96B36 256 aa15.16■□□□□ 0.02
KTN1-209ENST00000553360 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
KTN1-209ENST00000553360 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
KTN1-209ENST00000553360 PROM2Q8N271 834 aa15□□□□□ -0.01
KTN1-209ENST00000553360 SPDYE1Q8NFV5 336 aaPredicted RBP14.91□□□□□ -0.02
KTN1-209ENST00000553360 CLEC11AQ9Y240 323 aa14.9□□□□□ -0.02
KTN1-209ENST00000553360 PITPNM1O00562 1244 aa14.85□□□□□ -0.03
KTN1-209ENST00000553360 STAG3Q9UJ98 1225 aa14.84□□□□□ -0.03
KTN1-209ENST00000553360 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
KTN1-209ENST00000553360 PRR29P0C7W0 189 aa14.74□□□□□ -0.05
KTN1-209ENST00000553360 CHRDL2Q6WN34 429 aa14.72□□□□□ -0.05
KTN1-209ENST00000553360 MIER1Q8N108 512 aa14.61□□□□□ -0.07
KTN1-209ENST00000553360 VASPP50552 380 aaPredicted RBP14.6□□□□□ -0.07
KTN1-209ENST00000553360 PLCD3Q8N3E9 789 aa14.58□□□□□ -0.08
KTN1-209ENST00000553360 FXR2P51116 673 aaKnown RBP eCLIP14.55□□□□□ -0.087e-7■■□□□ 13.8
KTN1-209ENST00000553360 PIP4P2Q8N4L2 257 aa14.54□□□□□ -0.08
KTN1-209ENST00000553360 PLEKHG5O94827 1062 aa14.52□□□□□ -0.09
KTN1-209ENST00000553360 CHADLQ6NUI6 762 aa14.51□□□□□ -0.09
KTN1-209ENST00000553360 CREBZFQ9NS37 354 aa14.51□□□□□ -0.09
KTN1-209ENST00000553360 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
KTN1-209ENST00000553360 KLHL34Q8N239 644 aa14.43□□□□□ -0.1
KTN1-209ENST00000553360 IFNLR1Q8IU57 520 aaPredicted RBP14.4□□□□□ -0.1
KTN1-209ENST00000553360 ZBTB47Q9UFB7 747 aaPredicted RBP14.37□□□□□ -0.11
KTN1-209ENST00000553360 FARP1Q9Y4F1 1045 aaPredicted RBP14.35□□□□□ -0.11
KTN1-209ENST00000553360 MNX1P50219 401 aaPredicted RBP14.33□□□□□ -0.12
KTN1-209ENST00000553360 NPM1P06748 294 aaKnown RBP eCLIP14.3□□□□□ -0.12
KTN1-209ENST00000553360 POTEHQ6S545 545 aa14.27□□□□□ -0.13
KTN1-209ENST00000553360 SPOCK2Q92563 424 aa14.25□□□□□ -0.13
KTN1-209ENST00000553360 NUBP1P53384 320 aa14.16□□□□□ -0.14
KTN1-209ENST00000553360 HAX1O00165 279 aa14.13□□□□□ -0.15
KTN1-209ENST00000553360 RASEFQ8IZ41 740 aa14.12□□□□□ -0.15
KTN1-209ENST00000553360 DCAF8Q5TAQ9 597 aa14.1□□□□□ -0.15
KTN1-209ENST00000553360 TSPYL2Q9H2G4 693 aaPredicted RBP14.09□□□□□ -0.15
KTN1-209ENST00000553360 CD44P16070 742 aaKnown RBP14.08□□□□□ -0.16
KTN1-209ENST00000553360 CIZ1Q9ULV3 898 aaPredicted RBP14.08□□□□□ -0.16
KTN1-209ENST00000553360 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
KTN1-209ENST00000553360 FAM212AQ96EL1 285 aa14.07□□□□□ -0.16
KTN1-209ENST00000553360 C19orf67A6NJJ6 358 aa14.06□□□□□ -0.16
KTN1-209ENST00000553360 GSE1Q14687 1217 aa14.02□□□□□ -0.17
KTN1-209ENST00000553360 ZRANB1Q9UGI0 708 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms