RNA–Protein interactions for RNA: ENST00000539310.5

PLS3-209, Transcript of plastin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLS3, Length 3,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-209ENST00000539310 KRTAP4-9Q9BYQ8 210 aa2.48□□□□□ -2.01
PLS3-209ENST00000539310 A0A0D9SG42 100 aa2.47□□□□□ -2.01
PLS3-209ENST00000539310 C9orf92A6NGG3 77 aa2.47□□□□□ -2.01
PLS3-209ENST00000539310 DNAH7Q8WXX0 4024 aa2.47□□□□□ -2.01
PLS3-209ENST00000539310 COX6B2Q6YFQ2 88 aa2.47□□□□□ -2.01
PLS3-209ENST00000539310 KRTAP15-1Q3LI76 137 aa2.47□□□□□ -2.01
PLS3-209ENST00000539310 CMYA5Q8N3K9 4069 aa2.46□□□□□ -2.01
PLS3-209ENST00000539310 PLECQ15149 4684 aaKnown RBP2.46□□□□□ -2.02
PLS3-209ENST00000539310 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
PLS3-209ENST00000539310 KRTAP19-4Q3LI73 84 aa2.46□□□□□ -2.02
PLS3-209ENST00000539310 DNAH17Q9UFH2 4485 aa2.46□□□□□ -2.02
PLS3-209ENST00000539310 RPL37P61927 97 aaKnown RBP2.45□□□□□ -2.02
PLS3-209ENST00000539310 KRTAP1-4P0C5Y4 121 aa2.44□□□□□ -2.02
PLS3-209ENST00000539310 DNAH3Q8TD57 4116 aa2.44□□□□□ -2.02
PLS3-209ENST00000539310 C10orf95Q9H7T3 257 aa2.43□□□□□ -2.02
PLS3-209ENST00000539310 TPRXLQ17RH7 258 aa2.42□□□□□ -2.02
PLS3-209ENST00000539310 KRTAP10-1P60331 282 aa2.42□□□□□ -2.02
PLS3-209ENST00000539310 HECTD4Q9Y4D8 3996 aa2.41□□□□□ -2.02
PLS3-209ENST00000539310 KMT2AQ03164 3969 aa2.4□□□□□ -2.03
PLS3-209ENST00000539310 KRTAP9-3Q9BYQ3 159 aa2.39□□□□□ -2.03
PLS3-209ENST00000539310 LRP1BQ9NZR2 4599 aa2.38□□□□□ -2.03
PLS3-209ENST00000539310 DNAH11Q96DT5 4516 aa2.38□□□□□ -2.03
PLS3-209ENST00000539310 VPS13DQ5THJ4 4388 aa2.38□□□□□ -2.03
PLS3-209ENST00000539310 DNAH2Q9P225 4427 aa2.38□□□□□ -2.03
PLS3-209ENST00000539310 STARD9Q9P2P6 4700 aa2.38□□□□□ -2.03
PLS3-209ENST00000539310 KRTAP13-4Q3LI77 160 aa2.38□□□□□ -2.03
PLS3-209ENST00000539310 DNAH6Q9C0G6 4158 aa2.37□□□□□ -2.03
PLS3-209ENST00000539310 KRTAP10-6P60371 365 aaPredicted RBP2.36□□□□□ -2.03
PLS3-209ENST00000539310 RPS29P62273 56 aaKnown RBP2.36□□□□□ -2.03
PLS3-209ENST00000539310 SMR3BP02814 79 aaPredicted RBP2.36□□□□□ -2.03
PLS3-209ENST00000539310 KRTAP4-5Q9BYR2 181 aa2.36□□□□□ -2.03
PLS3-209ENST00000539310 S4R3F8 94 aa2.36□□□□□ -2.03
PLS3-209ENST00000539310 DYNC2H1Q8NCM8 4307 aaKnown RBP2.35□□□□□ -2.03
PLS3-209ENST00000539310 KRTAP12-2P59991 146 aa2.33□□□□□ -2.04
PLS3-209ENST00000539310 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
PLS3-209ENST00000539310 VPS13BQ7Z7G8 4022 aa2.32□□□□□ -2.04
PLS3-209ENST00000539310 DNAH5Q8TE73 4624 aa2.31□□□□□ -2.04
PLS3-209ENST00000539310 LCE5AQ5TCM9 118 aa2.3□□□□□ -2.04
PLS3-209ENST00000539310 PRO2289Q9P1D8 64 aa2.29□□□□□ -2.04
PLS3-209ENST00000539310 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
PLS3-209ENST00000539310 PRKDCP78527 4128 aaKnown RBP2.29□□□□□ -2.04
PLS3-209ENST00000539310 KRTAP10-8P60410 259 aa2.27□□□□□ -2.05
PLS3-209ENST00000539310 FAT2Q9NYQ8 4349 aa2.26□□□□□ -2.05
PLS3-209ENST00000539310 M0QZ58 72 aa2.25□□□□□ -2.05
PLS3-209ENST00000539310 PLAC4Q8WY50 150 aa2.25□□□□□ -2.05
PLS3-209ENST00000539310 FAT1Q14517 4588 aa2.24□□□□□ -2.05
PLS3-209ENST00000539310 R4GN34 69 aa2.22□□□□□ -2.05
PLS3-209ENST00000539310 SACSQ9NZJ4 4579 aa2.22□□□□□ -2.05
PLS3-209ENST00000539310 MYCBP2O75592 4640 aa2.21□□□□□ -2.06
PLS3-209ENST00000539310 PKD1P98161 4303 aa2.2□□□□□ -2.06
PLS3-209ENST00000539310 PKHD1P08F94 4074 aa2.2□□□□□ -2.06
PLS3-209ENST00000539310 HYDINQ4G0P3 5121 aa2.19□□□□□ -2.06
PLS3-209ENST00000539310 DYNC1H1Q14204 4646 aaKnown RBP2.19□□□□□ -2.06
PLS3-209ENST00000539310 KRTAP10-4P60372 401 aaPredicted RBP2.18□□□□□ -2.06
PLS3-209ENST00000539310 INE1O15225 51 aa2.18□□□□□ -2.06
PLS3-209ENST00000539310 APOBP04114 4563 aaKnown RBP2.16□□□□□ -2.06
PLS3-209ENST00000539310 HSPG2P98160 4391 aa2.15□□□□□ -2.07
PLS3-209ENST00000539310 LRP1Q07954 4544 aaKnown RBP2.14□□□□□ -2.07
PLS3-209ENST00000539310 DNHD1Q96M86 4753 aa2.14□□□□□ -2.07
PLS3-209ENST00000539310 PP632Q6XCG6 107 aa2.13□□□□□ -2.07
PLS3-209ENST00000539310 PKHD1L1Q86WI1 4243 aa2.13□□□□□ -2.07
PLS3-209ENST00000539310 FAT3Q8TDW7 4589 aa2.12□□□□□ -2.07
PLS3-209ENST00000539310 A0A1B0GVY2 172 aa2.12□□□□□ -2.07
PLS3-209ENST00000539310 Q5VSD8 79 aa2.12□□□□□ -2.07
PLS3-209ENST00000539310 LPAP08519 4548 aa2.09□□□□□ -2.08
PLS3-209ENST00000539310 LRP2P98164 4655 aa2.07□□□□□ -2.08
PLS3-209ENST00000539310 TNP1P09430 55 aa2.05□□□□□ -2.08
PLS3-209ENST00000539310 TNXBP22105 4242 aa2.05□□□□□ -2.08
PLS3-209ENST00000539310 KMT2CQ8NEZ4 4911 aaKnown RBP2.05□□□□□ -2.08
PLS3-209ENST00000539310 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
PLS3-209ENST00000539310 MT1HL1P0DM35 61 aa2.03□□□□□ -2.08
PLS3-209ENST00000539310 SPRR5A0A1B0GTR4 108 aa2.01□□□□□ -2.09
PLS3-209ENST00000539310 RYR1P21817 5038 aa1.96□□□□□ -2.1
PLS3-209ENST00000539310 KIAA1109Q2LD37 5005 aa1.96□□□□□ -2.1
PLS3-209ENST00000539310 LCE1AQ5T7P2 110 aa1.95□□□□□ -2.1
PLS3-209ENST00000539310 KRTAP4-1Q9BYQ7 146 aa1.94□□□□□ -2.1
PLS3-209ENST00000539310 RYR2Q92736 4967 aa1.93□□□□□ -2.1
PLS3-209ENST00000539310 RYR3Q15413 4870 aa1.92□□□□□ -2.1
PLS3-209ENST00000539310 ABCA13Q86UQ4 5058 aa1.91□□□□□ -2.1
PLS3-209ENST00000539310 MUC2Q02817 5179 aa1.9□□□□□ -2.11
PLS3-209ENST00000539310 LCE3AQ5TA76 89 aa1.89□□□□□ -2.11
PLS3-209ENST00000539310 MUC17Q685J3 4493 aa1.87□□□□□ -2.11
PLS3-209ENST00000539310 KRTAP19-2Q3LHN2 52 aa1.87□□□□□ -2.11
PLS3-209ENST00000539310 M0R2T5 61 aa1.85□□□□□ -2.11
PLS3-209ENST00000539310 EPPK1P58107 5090 aaKnown RBP1.84□□□□□ -2.11
PLS3-209ENST00000539310 KRTAP2-2Q9BYT5 123 aa1.83□□□□□ -2.12
PLS3-209ENST00000539310 BIRC6Q9NR09 4857 aa1.83□□□□□ -2.12
PLS3-209ENST00000539310 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
PLS3-209ENST00000539310 FLGP20930 4061 aaPredicted RBP1.81□□□□□ -2.12
PLS3-209ENST00000539310 KRTAP8-1Q8IUC2 63 aa1.81□□□□□ -2.12
PLS3-209ENST00000539310 SPRR2GQ9BYE4 73 aa1.81□□□□□ -2.12
PLS3-209ENST00000539310 PCLOQ9Y6V0 5065 aa1.81□□□□□ -2.12
PLS3-209ENST00000539310 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
PLS3-209ENST00000539310 HERC2O95714 4834 aa1.79□□□□□ -2.12
PLS3-209ENST00000539310 FAT4Q6V0I7 4981 aa1.79□□□□□ -2.12
PLS3-209ENST00000539310 KRTAP10-10P60014 251 aa1.79□□□□□ -2.12
PLS3-209ENST00000539310 LCE1FQ5T754 118 aa1.77□□□□□ -2.13
PLS3-209ENST00000539310 KRTAP10-12P60413 245 aa1.77□□□□□ -2.13
PLS3-209ENST00000539310 MT3P25713 68 aa1.75□□□□□ -2.13
PLS3-209ENST00000539310 HERC1Q15751 4861 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms