RNA–Protein interactions for RNA: ENST00000530958.5

ATM-215, Transcript of ATM serine/threonine kinase, humanhuman

TSL 2 BASIC

Gene ATM, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-215ENST00000530958 KRTAP3-1Q9BYR8 98 aa3.76□□□□□ -1.81
ATM-215ENST00000530958 MT1HL1P0DM35 61 aa3.75□□□□□ -1.81
ATM-215ENST00000530958 KRTAP10-4P60372 401 aaPredicted RBP3.73□□□□□ -1.81
ATM-215ENST00000530958 LCE2DQ5TA82 110 aaPredicted RBP3.73□□□□□ -1.81
ATM-215ENST00000530958 KRTAP3-3Q9BYR6 98 aa3.73□□□□□ -1.81
ATM-215ENST00000530958 KRTAP3-2Q9BYR7 98 aa3.73□□□□□ -1.81
ATM-215ENST00000530958 ANK2Q01484 3957 aa3.73□□□□□ -1.81
ATM-215ENST00000530958 DNAH1Q9P2D7 4330 aa3.73□□□□□ -1.81
ATM-215ENST00000530958 LRP1BQ9NZR2 4599 aa3.73□□□□□ -1.81
ATM-215ENST00000530958 FAT3Q8TDW7 4589 aa3.71□□□□□ -1.82
ATM-215ENST00000530958 DYNC1H1Q14204 4646 aaKnown RBP3.7□□□□□ -1.82
ATM-215ENST00000530958 DNAH8Q96JB1 4490 aa3.7□□□□□ -1.82
ATM-215ENST00000530958 RYR3Q15413 4870 aa3.69□□□□□ -1.82
ATM-215ENST00000530958 KMT2AQ03164 3969 aa3.68□□□□□ -1.82
ATM-215ENST00000530958 VPS13DQ5THJ4 4388 aa3.62□□□□□ -1.83
ATM-215ENST00000530958 LRP1Q07954 4544 aaKnown RBP3.61□□□□□ -1.83
ATM-215ENST00000530958 KRTAP13-4Q3LI77 160 aa3.6□□□□□ -1.83
ATM-215ENST00000530958 KRTAP12-2P59991 146 aa3.6□□□□□ -1.83
ATM-215ENST00000530958 SACSQ9NZJ4 4579 aa3.59□□□□□ -1.84
ATM-215ENST00000530958 VPS13BQ7Z7G8 4022 aa3.58□□□□□ -1.84
ATM-215ENST00000530958 KRTAP10-6P60371 365 aaPredicted RBP3.58□□□□□ -1.84
ATM-215ENST00000530958 PCLOQ9Y6V0 5065 aa3.58□□□□□ -1.84
ATM-215ENST00000530958 DNAH17Q9UFH2 4485 aa3.57□□□□□ -1.84
ATM-215ENST00000530958 DNAH2Q9P225 4427 aa3.57□□□□□ -1.84
ATM-215ENST00000530958 KMT2CQ8NEZ4 4911 aaKnown RBP3.57□□□□□ -1.84
ATM-215ENST00000530958 APOBP04114 4563 aaKnown RBP3.56□□□□□ -1.84
ATM-215ENST00000530958 ALMS1Q8TCU4 4167 aa3.55□□□□□ -1.84
ATM-215ENST00000530958 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
ATM-215ENST00000530958 HERC2O95714 4834 aa3.52□□□□□ -1.85
ATM-215ENST00000530958 LRP2P98164 4655 aa3.51□□□□□ -1.85
ATM-215ENST00000530958 DNAH6Q9C0G6 4158 aa3.5□□□□□ -1.85
ATM-215ENST00000530958 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
ATM-215ENST00000530958 DNAH7Q8WXX0 4024 aa3.49□□□□□ -1.85
ATM-215ENST00000530958 KRTAP17-1Q9BYP8 105 aa3.48□□□□□ -1.85
ATM-215ENST00000530958 PKHD1P08F94 4074 aa3.48□□□□□ -1.85
ATM-215ENST00000530958 RYR2Q92736 4967 aa3.45□□□□□ -1.86
ATM-215ENST00000530958 EPPK1P58107 5090 aaKnown RBP3.43□□□□□ -1.86
ATM-215ENST00000530958 LORP23490 312 aaPredicted RBP3.43□□□□□ -1.86
ATM-215ENST00000530958 KRTAP4-1Q9BYQ7 146 aa3.42□□□□□ -1.86
ATM-215ENST00000530958 DYNC2H1Q8NCM8 4307 aaKnown RBP3.41□□□□□ -1.86
ATM-215ENST00000530958 FRAS1Q86XX4 4008 aa3.41□□□□□ -1.86
ATM-215ENST00000530958 CMYA5Q8N3K9 4069 aa3.41□□□□□ -1.86
ATM-215ENST00000530958 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
ATM-215ENST00000530958 FAT2Q9NYQ8 4349 aa3.4□□□□□ -1.87
ATM-215ENST00000530958 DNAH3Q8TD57 4116 aa3.37□□□□□ -1.87
ATM-215ENST00000530958 FSIP2Q5CZC0 6907 aa3.36□□□□□ -1.87
ATM-215ENST00000530958 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
ATM-215ENST00000530958 CRCT1Q9UGL9 99 aa3.34□□□□□ -1.88
ATM-215ENST00000530958 HECTD4Q9Y4D8 3996 aa3.32□□□□□ -1.88
ATM-215ENST00000530958 ABCA13Q86UQ4 5058 aa3.31□□□□□ -1.88
ATM-215ENST00000530958 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
ATM-215ENST00000530958 BIRC6Q9NR09 4857 aa3.26□□□□□ -1.89
ATM-215ENST00000530958 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
ATM-215ENST00000530958 MUC2Q02817 5179 aa3.25□□□□□ -1.89
ATM-215ENST00000530958 HERC1Q15751 4861 aa3.25□□□□□ -1.89
ATM-215ENST00000530958 KRTAP23-1A1A580 65 aa3.24□□□□□ -1.89
ATM-215ENST00000530958 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
ATM-215ENST00000530958 LPAP08519 4548 aa3.23□□□□□ -1.89
ATM-215ENST00000530958 LCE2BO14633 110 aa3.23□□□□□ -1.89
ATM-215ENST00000530958 HSPG2P98160 4391 aa3.21□□□□□ -1.9
ATM-215ENST00000530958 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
ATM-215ENST00000530958 MT1HP80294 61 aa3.19□□□□□ -1.9
ATM-215ENST00000530958 FAT4Q6V0I7 4981 aa3.18□□□□□ -1.9
ATM-215ENST00000530958 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
ATM-215ENST00000530958 PKD1P98161 4303 aa3.17□□□□□ -1.9
ATM-215ENST00000530958 MT2AP02795 61 aa3.15□□□□□ -1.9
ATM-215ENST00000530958 INE1O15225 51 aa3.15□□□□□ -1.91
ATM-215ENST00000530958 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
ATM-215ENST00000530958 MT1FP04733 61 aa3.13□□□□□ -1.91
ATM-215ENST00000530958 SPRR2FQ96RM1 72 aa3.1□□□□□ -1.91
ATM-215ENST00000530958 LCE2CQ5TA81 110 aa3.06□□□□□ -1.92
ATM-215ENST00000530958 SPRR2GQ9BYE4 73 aa3.04□□□□□ -1.92
ATM-215ENST00000530958 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
ATM-215ENST00000530958 KRTAP19-1Q8IUB9 90 aa3.02□□□□□ -1.93
ATM-215ENST00000530958 SPRR2EP22531 72 aa3.01□□□□□ -1.93
ATM-215ENST00000530958 SPRR2BP35325 72 aa3.01□□□□□ -1.93
ATM-215ENST00000530958 SPRR2AP35326 72 aa3.01□□□□□ -1.93
ATM-215ENST00000530958 HMCN2Q8NDA2 5059 aa3□□□□□ -1.93
ATM-215ENST00000530958 KRTAP10-5P60370 271 aa3□□□□□ -1.93
ATM-215ENST00000530958 MUC17Q685J3 4493 aa2.96□□□□□ -1.94
ATM-215ENST00000530958 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
ATM-215ENST00000530958 PKHD1L1Q86WI1 4243 aa2.95□□□□□ -1.94
ATM-215ENST00000530958 KRTAP9-8Q9BYQ0 159 aa2.94□□□□□ -1.94
ATM-215ENST00000530958 SPRR2DP22532 72 aa2.93□□□□□ -1.94
ATM-215ENST00000530958 TNXBP22105 4242 aa2.92□□□□□ -1.94
ATM-215ENST00000530958 USH2AO75445 5202 aa2.91□□□□□ -1.94
ATM-215ENST00000530958 KRTAP19-2Q3LHN2 52 aa2.91□□□□□ -1.94
ATM-215ENST00000530958 DSTQ03001 7570 aaKnown RBP2.91□□□□□ -1.94
ATM-215ENST00000530958 LCE2AQ5TA79 106 aaPredicted RBP2.9□□□□□ -1.94
ATM-215ENST00000530958 KRTAP19-5Q3LI72 72 aa2.88□□□□□ -1.95
ATM-215ENST00000530958 MT1BP07438 61 aa2.87□□□□□ -1.95
ATM-215ENST00000530958 KRTAP4-8A0A0G2JLE6 195 aa2.85□□□□□ -1.95
ATM-215ENST00000530958 KRTAP4-8Q9BYQ9 185 aa2.85□□□□□ -1.95
ATM-215ENST00000530958 KRTAP19-8Q3LI54 63 aa2.85□□□□□ -1.95
ATM-215ENST00000530958 MT1XP80297 61 aa2.84□□□□□ -1.95
ATM-215ENST00000530958 KRTAP9-2Q9BYQ4 174 aa2.83□□□□□ -1.96
ATM-215ENST00000530958 FCGBPQ9Y6R7 5405 aaPredicted RBP2.83□□□□□ -1.96
ATM-215ENST00000530958 KRTAP9-3Q9BYQ3 159 aa2.82□□□□□ -1.96
ATM-215ENST00000530958 FLGP20930 4061 aaPredicted RBP2.82□□□□□ -1.96
ATM-215ENST00000530958 KRTAP9-6A0A140TA67 174 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms