RNA–Protein interactions for RNA: ENST00000530958.5

ATM-215, Transcript of ATM serine/threonine kinase, humanhuman

TSL 2 BASIC

Gene ATM, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-215ENST00000530958 DCAF8L2P0C7V8 631 aa13.73□□□□□ -0.21
ATM-215ENST00000530958 NISCHQ9Y2I1 1504 aa13.64□□□□□ -0.23
ATM-215ENST00000530958 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
ATM-215ENST00000530958 SHROOM4Q9ULL8 1493 aa13.02□□□□□ -0.32
ATM-215ENST00000530958 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
ATM-215ENST00000530958 FAM9AQ8IZU1 332 aaPredicted RBP12.29□□□□□ -0.44
ATM-215ENST00000530958 TTBK1Q5TCY1 1321 aaPredicted RBP12.08□□□□□ -0.48
ATM-215ENST00000530958 APLP2Q06481 763 aa12□□□□□ -0.49
ATM-215ENST00000530958 RANGAP1P46060 587 aaPredicted RBP12□□□□□ -0.49
ATM-215ENST00000530958 PCGF6Q9BYE7 350 aa11.96□□□□□ -0.49
ATM-215ENST00000530958 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
ATM-215ENST00000530958 PPARGC1BQ86YN6 1023 aaKnown RBP11.82□□□□□ -0.52
ATM-215ENST00000530958 ABCC9O60706 1549 aa11.81□□□□□ -0.52
ATM-215ENST00000530958 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
ATM-215ENST00000530958 PABPN1Q86U42 306 aaKnown RBP eCLIP11.76□□□□□ -0.53
ATM-215ENST00000530958 CHIC1Q5VXU3 224 aa11.75□□□□□ -0.53
ATM-215ENST00000530958 UBTFP17480 764 aaKnown RBP11.74□□□□□ -0.53
ATM-215ENST00000530958 ATP1B4Q9UN42 357 aaPredicted RBP11.67□□□□□ -0.54
ATM-215ENST00000530958 PELP1Q8IZL8 1130 aaKnown RBP11.58□□□□□ -0.56
ATM-215ENST00000530958 CCER1Q8TC90 406 aaPredicted RBP11.52□□□□□ -0.56
ATM-215ENST00000530958 MYT1LQ9UL68 1186 aa11.42□□□□□ -0.58
ATM-215ENST00000530958 ITGAEP38570 1179 aa11.41□□□□□ -0.58
ATM-215ENST00000530958 TRIM26Q12899 539 aaPredicted RBP11.36□□□□□ -0.59
ATM-215ENST00000530958 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
ATM-215ENST00000530958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.31□□□□□ -0.6
ATM-215ENST00000530958 ZCCHC6Q5VYS8 1495 aaKnown RBP11.29□□□□□ -0.6
ATM-215ENST00000530958 HRCP23327 699 aa11.24□□□□□ -0.61
ATM-215ENST00000530958 ZEB1P37275 1124 aaPredicted RBP11.22□□□□□ -0.61
ATM-215ENST00000530958 SCRIBQ14160 1630 aa11.22□□□□□ -0.61
ATM-215ENST00000530958 YTHDC1Q96MU7 727 aaKnown RBP11.21□□□□□ -0.61
ATM-215ENST00000530958 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
ATM-215ENST00000530958 CSRNP3Q8WYN3 585 aa11.1□□□□□ -0.63
ATM-215ENST00000530958 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
ATM-215ENST00000530958 FBLN2P98095 1184 aa11.1□□□□□ -0.63
ATM-215ENST00000530958 CNGB1Q14028 1251 aaPredicted RBP11.1□□□□□ -0.63
ATM-215ENST00000530958 FAM50AQ14320 339 aaKnown RBP11.05□□□□□ -0.64
ATM-215ENST00000530958 CENPBP07199 599 aaPredicted RBP11.02□□□□□ -0.64
ATM-215ENST00000530958 POLR3GLQ9BT43 218 aa11.02□□□□□ -0.65
ATM-215ENST00000530958 CCDC180Q9P1Z9 1646 aa11□□□□□ -0.65
ATM-215ENST00000530958 RSF1Q96T23 1441 aaPredicted RBP10.99□□□□□ -0.65
ATM-215ENST00000530958 ERICH6Q7L0X2 663 aa10.98□□□□□ -0.65
ATM-215ENST00000530958 NEFLP07196 543 aa10.97□□□□□ -0.65
ATM-215ENST00000530958 NEUROD1Q13562 356 aa10.94□□□□□ -0.66
ATM-215ENST00000530958 MYO15BQ96JP2 1530 aa10.94□□□□□ -0.66
ATM-215ENST00000530958 CECR2Q9BXF3 1484 aa10.93□□□□□ -0.66
ATM-215ENST00000530958 SLC4A1APQ9BWU0 796 aaKnown RBP10.91□□□□□ -0.66
ATM-215ENST00000530958 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
ATM-215ENST00000530958 DIEXFQ68CQ4 756 aaKnown RBP10.87□□□□□ -0.67
ATM-215ENST00000530958 NPM1P06748 294 aaKnown RBP eCLIP10.83□□□□□ -0.68
ATM-215ENST00000530958 ESF1Q9H501 851 aaKnown RBP10.83□□□□□ -0.68
ATM-215ENST00000530958 ZNF326Q5BKZ1 582 aaKnown RBP10.81□□□□□ -0.68
ATM-215ENST00000530958 RB1CC1Q8TDY2 1594 aa10.8□□□□□ -0.68
ATM-215ENST00000530958 ZNF777Q9ULD5 760 aaPredicted RBP10.8□□□□□ -0.68
ATM-215ENST00000530958 BCANQ96GW7 911 aa10.78□□□□□ -0.68
ATM-215ENST00000530958 NACADO15069 1562 aa10.74□□□□□ -0.69
ATM-215ENST00000530958 PLPPR3Q6T4P5 718 aa10.74□□□□□ -0.69
ATM-215ENST00000530958 CDK11AQ9UQ88 783 aaPredicted RBP10.73□□□□□ -0.69
ATM-215ENST00000530958 CHIC2Q9UKJ5 165 aa10.72□□□□□ -0.69
ATM-215ENST00000530958 DCAF1Q9Y4B6 1507 aa10.72□□□□□ -0.69
ATM-215ENST00000530958 DAXXQ9UER7 740 aaPredicted RBP10.71□□□□□ -0.7
ATM-215ENST00000530958 MROH2BQ7Z745 1585 aa10.69□□□□□ -0.7
ATM-215ENST00000530958 WRNQ14191 1432 aaPredicted RBP eCLIP10.68□□□□□ -0.7
ATM-215ENST00000530958 BAZ1BQ9UIG0 1483 aaKnown RBP10.67□□□□□ -0.7
ATM-215ENST00000530958 ZNF316A6NFI3 1004 aaPredicted RBP10.66□□□□□ -0.7
ATM-215ENST00000530958 CLIP1P30622 1438 aa10.65□□□□□ -0.7
ATM-215ENST00000530958 SOGA1O94964 1423 aa10.65□□□□□ -0.71
ATM-215ENST00000530958 MYT1Q01538 1121 aa10.64□□□□□ -0.71
ATM-215ENST00000530958 HIRIP3Q9BW71 556 aaPredicted RBP10.64□□□□□ -0.71
ATM-215ENST00000530958 CHMP7Q8WUX9 453 aaPredicted RBP10.63□□□□□ -0.71
ATM-215ENST00000530958 CEP162Q5TB80 1403 aa10.62□□□□□ -0.71
ATM-215ENST00000530958 STAG3Q9UJ98 1225 aa10.61□□□□□ -0.71
ATM-215ENST00000530958 NEFMP07197 916 aa10.61□□□□□ -0.71
ATM-215ENST00000530958 BAZ1AQ9NRL2 1556 aaPredicted RBP10.6□□□□□ -0.71
ATM-215ENST00000530958 TRHP20396 242 aaPredicted RBP10.59□□□□□ -0.71
ATM-215ENST00000530958 GTF3C3Q9Y5Q9 886 aa10.58□□□□□ -0.72
ATM-215ENST00000530958 CCDC88BA6NC98 1476 aa10.56□□□□□ -0.72
ATM-215ENST00000530958 RRP7BPQ9NSQ0 103 aa10.56□□□□□ -0.72
ATM-215ENST00000530958 ZBTB47Q9UFB7 747 aaPredicted RBP10.55□□□□□ -0.72
ATM-215ENST00000530958 ABCC8Q09428 1581 aa10.55□□□□□ -0.72
ATM-215ENST00000530958 MTUS2Q5JR59 1369 aa10.55□□□□□ -0.72
ATM-215ENST00000530958 DDX10Q13206 875 aaKnown RBP10.55□□□□□ -0.72
ATM-215ENST00000530958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.55□□□□□ -0.729e-10■■□□□ 12.4
ATM-215ENST00000530958 SLC24A1O60721 1099 aa10.54□□□□□ -0.72
ATM-215ENST00000530958 KCNH8Q96L42 1107 aa10.54□□□□□ -0.72
ATM-215ENST00000530958 SENP3Q9H4L4 574 aaPredicted RBP10.54□□□□□ -0.72
ATM-215ENST00000530958 ANP32CO43423 234 aa10.52□□□□□ -0.72
ATM-215ENST00000530958 CLSPNQ9HAW4 1339 aa10.52□□□□□ -0.72
ATM-215ENST00000530958 GOLGA3Q08378 1498 aa10.51□□□□□ -0.73
ATM-215ENST00000530958 KIF27Q86VH2 1401 aa10.5□□□□□ -0.73
ATM-215ENST00000530958 TNIKQ9UKE5 1360 aa10.5□□□□□ -0.73
ATM-215ENST00000530958 CHGAP10645 457 aaKnown RBP10.5□□□□□ -0.73
ATM-215ENST00000530958 WIZO95785 1651 aa10.48□□□□□ -0.73
ATM-215ENST00000530958 KDM2AQ9Y2K7 1162 aa10.48□□□□□ -0.73
ATM-215ENST00000530958 TONSLQ96HA7 1378 aa10.48□□□□□ -0.73
ATM-215ENST00000530958 TDRD9Q8NDG6 1382 aaKnown RBP10.47□□□□□ -0.73
ATM-215ENST00000530958 KANK4Q5T7N3 995 aaPredicted RBP10.47□□□□□ -0.73
ATM-215ENST00000530958 ERCC6Q03468 1493 aa10.47□□□□□ -0.73
ATM-215ENST00000530958 EEA1Q15075 1411 aa10.47□□□□□ -0.73
ATM-215ENST00000530958 TSPY4P0CV99 314 aa10.46□□□□□ -0.74
ATM-215ENST00000530958 TSPY10P0CW01 314 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms