RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 PRLHP81277 87 aa2.39□□□□□ -2.03
SKP1-213ENST00000524288 PCOTHQ58A44 107 aa2.39□□□□□ -2.03
SKP1-213ENST00000524288 SPACA4Q8TDM5 124 aa2.39□□□□□ -2.03
SKP1-213ENST00000524288 PRR15LQ9BU68 103 aa2.39□□□□□ -2.03
SKP1-213ENST00000524288 MAST4O15021 2626 aa2.38□□□□□ -2.03
SKP1-213ENST00000524288 CHKB-CPT1BH3BT56 60 aa2.38□□□□□ -2.03
SKP1-213ENST00000524288 KRTAP13-4Q3LI77 160 aa2.38□□□□□ -2.03
SKP1-213ENST00000524288 LCA10Q71F78 164 aa2.38□□□□□ -2.03
SKP1-213ENST00000524288 PHF5AQ7RTV0 110 aaKnown RBP2.38□□□□□ -2.03
SKP1-213ENST00000524288 UBE2DNLQ8IWF7 75 aa2.37□□□□□ -2.03
SKP1-213ENST00000524288 COL6A5A8TX70 2615 aa2.36□□□□□ -2.03
SKP1-213ENST00000524288 LY6G6CO95867 125 aa2.36□□□□□ -2.03
SKP1-213ENST00000524288 HUWE1Q7Z6Z7 4374 aaKnown RBP2.36□□□□□ -2.03
SKP1-213ENST00000524288 C7orf65Q6ZTY9 151 aa2.35□□□□□ -2.03
SKP1-213ENST00000524288 MRPL34Q9BQ48 92 aaKnown RBP2.35□□□□□ -2.03
SKP1-213ENST00000524288 Q6ZRN7 208 aaPredicted RBP2.34□□□□□ -2.03
SKP1-213ENST00000524288 DNHD1Q96M86 4753 aa2.33□□□□□ -2.04
SKP1-213ENST00000524288 NBDYA0A0U1RRE5 68 aa2.33□□□□□ -2.04
SKP1-213ENST00000524288 LYSTQ99698 3801 aa2.32□□□□□ -2.04
SKP1-213ENST00000524288 STAB1Q9NY15 2570 aa2.32□□□□□ -2.04
SKP1-213ENST00000524288 DNAH10Q8IVF4 4471 aa2.32□□□□□ -2.04
SKP1-213ENST00000524288 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
SKP1-213ENST00000524288 DMAC1Q96GE9 116 aa2.32□□□□□ -2.04
SKP1-213ENST00000524288 DNAH6Q9C0G6 4158 aa2.32□□□□□ -2.04
SKP1-213ENST00000524288 DNAH9Q9NYC9 4486 aa2.32□□□□□ -2.04
SKP1-213ENST00000524288 DNAH17Q9UFH2 4485 aa2.31□□□□□ -2.04
SKP1-213ENST00000524288 PRKDCP78527 4128 aaKnown RBP2.31□□□□□ -2.04
SKP1-213ENST00000524288 SPINK7P58062 85 aa2.31□□□□□ -2.04
SKP1-213ENST00000524288 C1orf134Q5TEV5 83 aa2.31□□□□□ -2.04
SKP1-213ENST00000524288 HECTD4Q9Y4D8 3996 aa2.31□□□□□ -2.04
SKP1-213ENST00000524288 VPS13DQ5THJ4 4388 aa2.31□□□□□ -2.04
SKP1-213ENST00000524288 SPAG11AQ6PDA7 123 aa2.3□□□□□ -2.04
SKP1-213ENST00000524288 SPTSSBQ8NFR3 76 aa2.3□□□□□ -2.04
SKP1-213ENST00000524288 DNAH7Q8WXX0 4024 aa2.3□□□□□ -2.04
SKP1-213ENST00000524288 NBEAL1Q6ZS30 2694 aa2.3□□□□□ -2.04
SKP1-213ENST00000524288 SRRM2Q9UQ35 2752 aaKnown RBP2.29□□□□□ -2.04
SKP1-213ENST00000524288 ACYP2P14621 99 aa2.29□□□□□ -2.04
SKP1-213ENST00000524288 STAB2Q8WWQ8 2551 aa2.29□□□□□ -2.04
SKP1-213ENST00000524288 SPATA8Q6RVD6 105 aa2.28□□□□□ -2.04
SKP1-213ENST00000524288 NOTCH1P46531 2555 aa2.28□□□□□ -2.04
SKP1-213ENST00000524288 DNAH8Q96JB1 4490 aa2.28□□□□□ -2.05
SKP1-213ENST00000524288 A0A087WTM6 91 aa2.27□□□□□ -2.05
SKP1-213ENST00000524288 SSBP3-AS1Q7Z2R9 100 aa2.27□□□□□ -2.05
SKP1-213ENST00000524288 COL7A1Q02388 2944 aa2.26□□□□□ -2.05
SKP1-213ENST00000524288 MGAM2Q2M2H8 2515 aa2.26□□□□□ -2.05
SKP1-213ENST00000524288 PLECQ15149 4684 aaKnown RBP2.25□□□□□ -2.05
SKP1-213ENST00000524288 CSMD3Q7Z407 3707 aa2.25□□□□□ -2.05
SKP1-213ENST00000524288 DNAH2Q9P225 4427 aa2.23□□□□□ -2.05
SKP1-213ENST00000524288 A0A1B0GU69 56 aa2.23□□□□□ -2.05
SKP1-213ENST00000524288 UQCR11O14957 56 aa2.23□□□□□ -2.05
SKP1-213ENST00000524288 FBN3Q75N90 2809 aa2.23□□□□□ -2.05
SKP1-213ENST00000524288 MIR22HGQ0VDD5 57 aa2.22□□□□□ -2.05
SKP1-213ENST00000524288 STARD9Q9P2P6 4700 aa2.22□□□□□ -2.05
SKP1-213ENST00000524288 LINC01554Q52M75 96 aa2.21□□□□□ -2.06
SKP1-213ENST00000524288 SPINK6Q6UWN8 80 aa2.21□□□□□ -2.06
SKP1-213ENST00000524288 DNAH11Q96DT5 4516 aa2.21□□□□□ -2.06
SKP1-213ENST00000524288 FRAS1Q86XX4 4008 aa2.2□□□□□ -2.06
SKP1-213ENST00000524288 Q6ZSA8 131 aa2.2□□□□□ -2.06
SKP1-213ENST00000524288 MEGF8Q7Z7M0 2845 aa2.2□□□□□ -2.06
SKP1-213ENST00000524288 SACSQ9NZJ4 4579 aa2.19□□□□□ -2.06
SKP1-213ENST00000524288 RPS29P62273 56 aaKnown RBP2.19□□□□□ -2.06
SKP1-213ENST00000524288 RETNLBQ9BQ08 111 aa2.19□□□□□ -2.06
SKP1-213ENST00000524288 DNAH5Q8TE73 4624 aa2.18□□□□□ -2.06
SKP1-213ENST00000524288 HYDINQ4G0P3 5121 aa2.15□□□□□ -2.06
SKP1-213ENST00000524288 SPINK1P00995 79 aa2.15□□□□□ -2.07
SKP1-213ENST00000524288 PKD1P98161 4303 aa2.15□□□□□ -2.07
SKP1-213ENST00000524288 H0YAA0 97 aa2.14□□□□□ -2.07
SKP1-213ENST00000524288 SMR3BP02814 79 aaPredicted RBP2.14□□□□□ -2.07
SKP1-213ENST00000524288 CSAG1Q6PB30 78 aa2.14□□□□□ -2.07
SKP1-213ENST00000524288 PKHD1L1Q86WI1 4243 aa2.14□□□□□ -2.07
SKP1-213ENST00000524288 KMT2AQ03164 3969 aa2.13□□□□□ -2.07
SKP1-213ENST00000524288 TGP01266 2768 aa2.13□□□□□ -2.07
SKP1-213ENST00000524288 RYR2Q92736 4967 aa2.13□□□□□ -2.07
SKP1-213ENST00000524288 H1FX-AS1Q4G0G2 97 aa2.12□□□□□ -2.07
SKP1-213ENST00000524288 CRCT1Q9UGL9 99 aa2.11□□□□□ -2.07
SKP1-213ENST00000524288 FAT2Q9NYQ8 4349 aa2.1□□□□□ -2.07
SKP1-213ENST00000524288 Q5VSD8 79 aa2.1□□□□□ -2.07
SKP1-213ENST00000524288 PKHD1P08F94 4074 aa2.1□□□□□ -2.07
SKP1-213ENST00000524288 VPS13BQ7Z7G8 4022 aa2.09□□□□□ -2.07
SKP1-213ENST00000524288 LRP1BQ9NZR2 4599 aa2.09□□□□□ -2.08
SKP1-213ENST00000524288 APOBP04114 4563 aaKnown RBP2.08□□□□□ -2.08
SKP1-213ENST00000524288 KRTAP10-4P60372 401 aaPredicted RBP2.08□□□□□ -2.08
SKP1-213ENST00000524288 ROMO1P60602 79 aa2.07□□□□□ -2.08
SKP1-213ENST00000524288 COX6B2Q6YFQ2 88 aa2.07□□□□□ -2.08
SKP1-213ENST00000524288 DYNC1H1Q14204 4646 aaKnown RBP2.07□□□□□ -2.08
SKP1-213ENST00000524288 KMT2CQ8NEZ4 4911 aaKnown RBP2.06□□□□□ -2.08
SKP1-213ENST00000524288 TNXBP22105 4242 aa2.06□□□□□ -2.08
SKP1-213ENST00000524288 RYR3Q15413 4870 aa2.05□□□□□ -2.08
SKP1-213ENST00000524288 FLG2Q5D862 2391 aaPredicted RBP2.03□□□□□ -2.08
SKP1-213ENST00000524288 BIRC6Q9NR09 4857 aa2.03□□□□□ -2.08
SKP1-213ENST00000524288 RPL37P61927 97 aaKnown RBP2.02□□□□□ -2.09
SKP1-213ENST00000524288 HSPG2P98160 4391 aa2.01□□□□□ -2.09
SKP1-213ENST00000524288 RYR1P21817 5038 aa2.01□□□□□ -2.09
SKP1-213ENST00000524288 C9orf92A6NGG3 77 aa2.01□□□□□ -2.09
SKP1-213ENST00000524288 MT1HL1P0DM35 61 aa2.01□□□□□ -2.09
SKP1-213ENST00000524288 FAT1Q14517 4588 aa2□□□□□ -2.09
SKP1-213ENST00000524288 EPPK1P58107 5090 aaKnown RBP1.99□□□□□ -2.09
SKP1-213ENST00000524288 LRP1Q07954 4544 aaKnown RBP1.98□□□□□ -2.09
SKP1-213ENST00000524288 S4R3F8 94 aa1.98□□□□□ -2.09
SKP1-213ENST00000524288 FAT3Q8TDW7 4589 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms