RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 A0A0D9SG42 100 aa9.36□□□□□ -0.91
TRAM1-205ENST00000521425 K7ERS5 55 aa9.35□□□□□ -0.91
TRAM1-205ENST00000521425 RYR1P21817 5038 aa9.34□□□□□ -0.91
TRAM1-205ENST00000521425 KRTAP10-4P60372 401 aaPredicted RBP9.31□□□□□ -0.92
TRAM1-205ENST00000521425 KRTAP17-1Q9BYP8 105 aa9.29□□□□□ -0.92
TRAM1-205ENST00000521425 KRTAP21-3Q3LHN1 58 aa9.26□□□□□ -0.93
TRAM1-205ENST00000521425 A0A0A0MQY5 61 aa9.26□□□□□ -0.93
TRAM1-205ENST00000521425 HSPG2P98160 4391 aa9.24□□□□□ -0.93
TRAM1-205ENST00000521425 KRTAP3-1Q9BYR8 98 aa9.24□□□□□ -0.93
TRAM1-205ENST00000521425 C10orf95Q9H7T3 257 aa9.22□□□□□ -0.93
TRAM1-205ENST00000521425 EPPK1P58107 5090 aaKnown RBP9.2□□□□□ -0.94
TRAM1-205ENST00000521425 PKHD1L1Q86WI1 4243 aa9.2□□□□□ -0.94
TRAM1-205ENST00000521425 H1FX-AS1Q4G0G2 97 aa9.19□□□□□ -0.94
TRAM1-205ENST00000521425 C20orf166-AS1Q96NR2 134 aa9.19□□□□□ -0.94
TRAM1-205ENST00000521425 LRP2P98164 4655 aa9.17□□□□□ -0.94
TRAM1-205ENST00000521425 LPAP08519 4548 aa9.15□□□□□ -0.94
TRAM1-205ENST00000521425 KRTAP10-8P60410 259 aa9.14□□□□□ -0.95
TRAM1-205ENST00000521425 KRTAP4-5Q9BYR2 181 aa9.09□□□□□ -0.95
TRAM1-205ENST00000521425 RPS29P62273 56 aaKnown RBP9.09□□□□□ -0.95
TRAM1-205ENST00000521425 XP32Q5T750 250 aa9.08□□□□□ -0.96
TRAM1-205ENST00000521425 COX6B2Q6YFQ2 88 aa9.07□□□□□ -0.96
TRAM1-205ENST00000521425 TPRXLQ17RH7 258 aa9.06□□□□□ -0.96
TRAM1-205ENST00000521425 ABCA13Q86UQ4 5058 aa9.05□□□□□ -0.96
TRAM1-205ENST00000521425 MUC2Q02817 5179 aa8.96□□□□□ -0.98
TRAM1-205ENST00000521425 RPL37P61927 97 aaKnown RBP8.95□□□□□ -0.98
TRAM1-205ENST00000521425 J3QL48 77 aa8.94□□□□□ -0.98
TRAM1-205ENST00000521425 TNXBP22105 4242 aa8.93□□□□□ -0.98
TRAM1-205ENST00000521425 S4R3F8 94 aa8.92□□□□□ -0.98
TRAM1-205ENST00000521425 MT1HL1P0DM35 61 aa8.9□□□□□ -0.98
TRAM1-205ENST00000521425 KRTAP15-1Q3LI76 137 aa8.87□□□□□ -0.99
TRAM1-205ENST00000521425 KRTAP13-4Q3LI77 160 aa8.8□□□□□ -1
TRAM1-205ENST00000521425 LUZP6Q538Z0 58 aa8.79□□□□□ -1
TRAM1-205ENST00000521425 KRTAP3-3Q9BYR6 98 aa8.76□□□□□ -1.01
TRAM1-205ENST00000521425 HERC2O95714 4834 aa8.74□□□□□ -1.01
TRAM1-205ENST00000521425 KRTAP10-6P60371 365 aaPredicted RBP8.67□□□□□ -1.02
TRAM1-205ENST00000521425 HERC1Q15751 4861 aa8.61□□□□□ -1.03
TRAM1-205ENST00000521425 KRTAP12-2P59991 146 aa8.58□□□□□ -1.04
TRAM1-205ENST00000521425 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
TRAM1-205ENST00000521425 M0QZ58 72 aa8.55□□□□□ -1.04
TRAM1-205ENST00000521425 RNF213Q63HN8 5207 aa8.53□□□□□ -1.04
TRAM1-205ENST00000521425 R4GN34 69 aa8.5□□□□□ -1.05
TRAM1-205ENST00000521425 FAT4Q6V0I7 4981 aa8.48□□□□□ -1.05
TRAM1-205ENST00000521425 KRTAP4-1Q9BYQ7 146 aa8.46□□□□□ -1.06
TRAM1-205ENST00000521425 SEC61BP60468 96 aaKnown RBP8.44□□□□□ -1.06
TRAM1-205ENST00000521425 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
TRAM1-205ENST00000521425 PCLOQ9Y6V0 5065 aa8.36□□□□□ -1.07
TRAM1-205ENST00000521425 KRTAP12-1P59990 96 aa8.34□□□□□ -1.07
TRAM1-205ENST00000521425 PLAC4Q8WY50 150 aa8.34□□□□□ -1.07
TRAM1-205ENST00000521425 M0R2T5 61 aa8.24□□□□□ -1.09
TRAM1-205ENST00000521425 UBR4Q5T4S7 5183 aa8.24□□□□□ -1.09
TRAM1-205ENST00000521425 CAMK2N1Q7Z7J9 78 aa8.21□□□□□ -1.09
TRAM1-205ENST00000521425 BIRC6Q9NR09 4857 aa8.09□□□□□ -1.11
TRAM1-205ENST00000521425 MUC17Q685J3 4493 aa8.06□□□□□ -1.12
TRAM1-205ENST00000521425 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
TRAM1-205ENST00000521425 KRTAP19-2Q3LHN2 52 aa7.77□□□□□ -1.17
TRAM1-205ENST00000521425 KRTAP10-10P60014 251 aa7.76□□□□□ -1.17
TRAM1-205ENST00000521425 FLGP20930 4061 aaPredicted RBP7.74□□□□□ -1.17
TRAM1-205ENST00000521425 FSIP2Q5CZC0 6907 aa7.66□□□□□ -1.18
TRAM1-205ENST00000521425 USH2AO75445 5202 aa7.62□□□□□ -1.19
TRAM1-205ENST00000521425 PP632Q6XCG6 107 aa7.56□□□□□ -1.2
TRAM1-205ENST00000521425 LCE2CQ5TA81 110 aa7.55□□□□□ -1.2
TRAM1-205ENST00000521425 TNP1P09430 55 aa7.54□□□□□ -1.2
TRAM1-205ENST00000521425 MT1HP80294 61 aa7.51□□□□□ -1.21
TRAM1-205ENST00000521425 MT1FP04733 61 aa7.45□□□□□ -1.22
TRAM1-205ENST00000521425 KRTAP19-1Q8IUB9 90 aa7.38□□□□□ -1.23
TRAM1-205ENST00000521425 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
TRAM1-205ENST00000521425 MT2AP02795 61 aa7.37□□□□□ -1.23
TRAM1-205ENST00000521425 KMT2DO14686 5537 aa7.35□□□□□ -1.23
TRAM1-205ENST00000521425 LCE3AQ5TA76 89 aa7.23□□□□□ -1.25
TRAM1-205ENST00000521425 KRTAP9-8Q9BYQ0 159 aa7.22□□□□□ -1.25
TRAM1-205ENST00000521425 SPRR2GQ9BYE4 73 aa7.19□□□□□ -1.26
TRAM1-205ENST00000521425 SPRR5A0A1B0GTR4 108 aa7.13□□□□□ -1.27
TRAM1-205ENST00000521425 INE1O15225 51 aa7.02□□□□□ -1.29
TRAM1-205ENST00000521425 MT1BP07438 61 aa7□□□□□ -1.29
TRAM1-205ENST00000521425 KRTAP10-7P60409 375 aaPredicted RBP6.97□□□□□ -1.29
TRAM1-205ENST00000521425 MT1XP80297 61 aa6.94□□□□□ -1.3
TRAM1-205ENST00000521425 KRTAP10-5P60370 271 aa6.92□□□□□ -1.3
TRAM1-205ENST00000521425 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
TRAM1-205ENST00000521425 KRTAP9-3Q9BYQ3 159 aa6.87□□□□□ -1.31
TRAM1-205ENST00000521425 LCE2BO14633 110 aa6.83□□□□□ -1.32
TRAM1-205ENST00000521425 KRTAP4-8A0A0G2JLE6 195 aa6.82□□□□□ -1.32
TRAM1-205ENST00000521425 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
TRAM1-205ENST00000521425 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
TRAM1-205ENST00000521425 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
TRAM1-205ENST00000521425 DSTQ03001 7570 aaKnown RBP6.78□□□□□ -1.32
TRAM1-205ENST00000521425 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
TRAM1-205ENST00000521425 KRTAP19-5Q3LI72 72 aa6.64□□□□□ -1.35
TRAM1-205ENST00000521425 KRTAP8-1Q8IUC2 63 aa6.6□□□□□ -1.35
TRAM1-205ENST00000521425 OBSCNQ5VST9 7968 aa6.59□□□□□ -1.35
TRAM1-205ENST00000521425 SSPOA2VEC9 5147 aa6.55□□□□□ -1.36
TRAM1-205ENST00000521425 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
TRAM1-205ENST00000521425 MUC12Q9UKN1 5478 aa6.54□□□□□ -1.36
TRAM1-205ENST00000521425 FCGBPQ9Y6R7 5405 aaPredicted RBP6.5□□□□□ -1.37
TRAM1-205ENST00000521425 LCE2AQ5TA79 106 aaPredicted RBP6.49□□□□□ -1.37
TRAM1-205ENST00000521425 SYNE1Q8NF91 8797 aaKnown RBP6.43□□□□□ -1.38
TRAM1-205ENST00000521425 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
TRAM1-205ENST00000521425 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
TRAM1-205ENST00000521425 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
TRAM1-205ENST00000521425 SYNE2Q8WXH0 6885 aaKnown RBP6.16□□□□□ -1.42
TRAM1-205ENST00000521425 KRTAP9-6A8MVA2 160 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms