RNA–Protein interactions for RNA: ENST00000511346.1

AC012055.1-201, humanhuman

TSL 3 BASIC

Gene AC012055.1, Length 1,144 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012055.1-201ENST00000511346 ACACBO00763 2458 aa1□□□□□ -2.25
AC012055.1-201ENST00000511346 SPTBN5Q9NRC6 3674 aaKnown RBP1□□□□□ -2.25
AC012055.1-201ENST00000511346 A0A096LNI7 61 aa1□□□□□ -2.25
AC012055.1-201ENST00000511346 LAMA5O15230 3695 aa1□□□□□ -2.25
AC012055.1-201ENST00000511346 LRP1Q07954 4544 aaKnown RBP0.99□□□□□ -2.25
AC012055.1-201ENST00000511346 DNAH9Q9NYC9 4486 aa0.99□□□□□ -2.25
AC012055.1-201ENST00000511346 SPRR2AP35326 72 aa0.99□□□□□ -2.25
AC012055.1-201ENST00000511346 CELSR3Q9NYQ7 3312 aa0.99□□□□□ -2.25
AC012055.1-201ENST00000511346 SPG11Q96JI7 2443 aa0.99□□□□□ -2.25
AC012055.1-201ENST00000511346 NEBP20929 6669 aa0.98□□□□□ -2.25
AC012055.1-201ENST00000511346 SYNE1Q8NF91 8797 aaKnown RBP0.97□□□□□ -2.25
AC012055.1-201ENST00000511346 HIVEP1P15822 2718 aa0.97□□□□□ -2.25
AC012055.1-201ENST00000511346 CEP250Q9BV73 2442 aa0.97□□□□□ -2.25
AC012055.1-201ENST00000511346 DNAH6Q9C0G6 4158 aa0.97□□□□□ -2.25
AC012055.1-201ENST00000511346 KALRNO60229 2985 aa0.96□□□□□ -2.26
AC012055.1-201ENST00000511346 SYNE2Q8WXH0 6885 aaKnown RBP0.96□□□□□ -2.26
AC012055.1-201ENST00000511346 APELAP0DMC3 54 aa0.96□□□□□ -2.26
AC012055.1-201ENST00000511346 DEFB124Q8NES8 71 aa0.95□□□□□ -2.26
AC012055.1-201ENST00000511346 HRNRQ86YZ3 2850 aaPredicted RBP0.95□□□□□ -2.26
AC012055.1-201ENST00000511346 KIAA1109Q2LD37 5005 aa0.94□□□□□ -2.26
AC012055.1-201ENST00000511346 KRTAP6-2Q3LI66 62 aa0.94□□□□□ -2.26
AC012055.1-201ENST00000511346 FASNP49327 2511 aaKnown RBP0.94□□□□□ -2.26
AC012055.1-201ENST00000511346 AKAP9Q99996 3911 aa0.94□□□□□ -2.26
AC012055.1-201ENST00000511346 MUC2Q02817 5179 aa0.94□□□□□ -2.26
AC012055.1-201ENST00000511346 HTN1P15515 57 aa0.93□□□□□ -2.26
AC012055.1-201ENST00000511346 SMR3BP02814 79 aaPredicted RBP0.92□□□□□ -2.26
AC012055.1-201ENST00000511346 APOBP04114 4563 aaKnown RBP0.92□□□□□ -2.26
AC012055.1-201ENST00000511346 TEP1Q99973 2627 aaKnown RBP0.92□□□□□ -2.26
AC012055.1-201ENST00000511346 DSTQ03001 7570 aaKnown RBP0.91□□□□□ -2.26
AC012055.1-201ENST00000511346 DEFB1P60022 68 aa0.91□□□□□ -2.26
AC012055.1-201ENST00000511346 ZANQ9Y493 2812 aa0.91□□□□□ -2.26
AC012055.1-201ENST00000511346 KMT2DO14686 5537 aa0.91□□□□□ -2.26
AC012055.1-201ENST00000511346 CFAP54Q96N23 3096 aa0.9□□□□□ -2.26
AC012055.1-201ENST00000511346 IGSF10Q6WRI0 2623 aa0.9□□□□□ -2.26
AC012055.1-201ENST00000511346 MYO18BQ8IUG5 2567 aa0.9□□□□□ -2.27
AC012055.1-201ENST00000511346 TENM3Q9P273 2699 aa0.9□□□□□ -2.27
AC012055.1-201ENST00000511346 DEFB136Q30KP8 78 aa0.9□□□□□ -2.27
AC012055.1-201ENST00000511346 TLN2Q9Y4G6 2542 aa0.9□□□□□ -2.27
AC012055.1-201ENST00000511346 USP9XQ93008 2570 aaPredicted RBP0.89□□□□□ -2.27
AC012055.1-201ENST00000511346 MDN1Q9NU22 5596 aa0.89□□□□□ -2.27
AC012055.1-201ENST00000511346 KRTAP19-5Q3LI72 72 aa0.88□□□□□ -2.27
AC012055.1-201ENST00000511346 RELNP78509 3460 aa0.88□□□□□ -2.27
AC012055.1-201ENST00000511346 FSIP2Q5CZC0 6907 aa0.88□□□□□ -2.27
AC012055.1-201ENST00000511346 TRIOO75962 3097 aa0.87□□□□□ -2.27
AC012055.1-201ENST00000511346 HTTP42858 3142 aa0.87□□□□□ -2.27
AC012055.1-201ENST00000511346 DNAH1Q9P2D7 4330 aa0.87□□□□□ -2.27
AC012055.1-201ENST00000511346 MAST4O15021 2626 aa0.86□□□□□ -2.27
AC012055.1-201ENST00000511346 TGP01266 2768 aa0.86□□□□□ -2.27
AC012055.1-201ENST00000511346 DMXL2Q8TDJ6 3036 aa0.86□□□□□ -2.27
AC012055.1-201ENST00000511346 CSMD1Q96PZ7 3565 aa0.86□□□□□ -2.27
AC012055.1-201ENST00000511346 PKHD1P08F94 4074 aa0.86□□□□□ -2.27
AC012055.1-201ENST00000511346 FAT3Q8TDW7 4589 aa0.84□□□□□ -2.27
AC012055.1-201ENST00000511346 ITPR1Q14643 2758 aa0.84□□□□□ -2.27
AC012055.1-201ENST00000511346 MUC5ACP98088 5654 aa0.84□□□□□ -2.27
AC012055.1-201ENST00000511346 SPRR2EP22531 72 aa0.84□□□□□ -2.27
AC012055.1-201ENST00000511346 SPRR2FQ96RM1 72 aa0.84□□□□□ -2.27
AC012055.1-201ENST00000511346 WDR87Q6ZQQ6 2873 aa0.83□□□□□ -2.28
AC012055.1-201ENST00000511346 MXRA5Q9NR99 2828 aa0.83□□□□□ -2.28
AC012055.1-201ENST00000511346 DNAH10Q8IVF4 4471 aa0.83□□□□□ -2.28
AC012055.1-201ENST00000511346 MGAM2Q2M2H8 2515 aa0.82□□□□□ -2.28
AC012055.1-201ENST00000511346 LRP1BQ9NZR2 4599 aa0.81□□□□□ -2.28
AC012055.1-201ENST00000511346 DEFB133Q30KQ1 61 aa0.81□□□□□ -2.28
AC012055.1-201ENST00000511346 FLNAP21333 2647 aaKnown RBP0.81□□□□□ -2.28
AC012055.1-201ENST00000511346 SVEP1Q4LDE5 3571 aa0.8□□□□□ -2.28
AC012055.1-201ENST00000511346 FAT1Q14517 4588 aa0.79□□□□□ -2.28
AC012055.1-201ENST00000511346 SMG1Q96Q15 3661 aaKnown RBP0.79□□□□□ -2.28
AC012055.1-201ENST00000511346 ATMQ13315 3056 aa0.78□□□□□ -2.28
AC012055.1-201ENST00000511346 ADGRG4Q8IZF6 3080 aa0.78□□□□□ -2.29
AC012055.1-201ENST00000511346 KMT2CQ8NEZ4 4911 aaKnown RBP0.77□□□□□ -2.29
AC012055.1-201ENST00000511346 LAMA1P25391 3075 aa0.77□□□□□ -2.29
AC012055.1-201ENST00000511346 CMYA5Q8N3K9 4069 aa0.77□□□□□ -2.29
AC012055.1-201ENST00000511346 RPS29P62273 56 aaKnown RBP0.76□□□□□ -2.29
AC012055.1-201ENST00000511346 PLECQ15149 4684 aaKnown RBP0.76□□□□□ -2.29
AC012055.1-201ENST00000511346 LAMA3Q16787 3333 aa0.76□□□□□ -2.29
AC012055.1-201ENST00000511346 NIPBLQ6KC79 2804 aaeCLIP0.75□□□□□ -2.29
AC012055.1-201ENST00000511346 FRYLO94915 3013 aa0.75□□□□□ -2.29
AC012055.1-201ENST00000511346 RYR1P21817 5038 aa0.75□□□□□ -2.29
AC012055.1-201ENST00000511346 LRBAP50851 2863 aa0.74□□□□□ -2.29
AC012055.1-201ENST00000511346 TEX15Q9BXT5 2789 aa0.74□□□□□ -2.29
AC012055.1-201ENST00000511346 RYR2Q92736 4967 aa0.72□□□□□ -2.29
AC012055.1-201ENST00000511346 PRUNE2Q8WUY3 3088 aa0.72□□□□□ -2.29
AC012055.1-201ENST00000511346 MAP1AP78559 2803 aaPredicted RBP0.71□□□□□ -2.3
AC012055.1-201ENST00000511346 SPTAN1Q13813 2472 aaKnown RBP0.71□□□□□ -2.3
AC012055.1-201ENST00000511346 NBEAL1Q6ZS30 2694 aa0.71□□□□□ -2.3
AC012055.1-201ENST00000511346 DNAH12Q6ZR08 3092 aa0.7□□□□□ -2.3
AC012055.1-201ENST00000511346 SSPOA2VEC9 5147 aa0.7□□□□□ -2.3
AC012055.1-201ENST00000511346 FAT4Q6V0I7 4981 aa0.7□□□□□ -2.3
AC012055.1-201ENST00000511346 DOPEY1Q5JWR5 2465 aa0.69□□□□□ -2.3
AC012055.1-201ENST00000511346 TRRAPQ9Y4A5 3859 aa0.68□□□□□ -2.3
AC012055.1-201ENST00000511346 Q9Y3F1 56 aa0.68□□□□□ -2.3
AC012055.1-201ENST00000511346 HMCN2Q8NDA2 5059 aa0.68□□□□□ -2.3
AC012055.1-201ENST00000511346 RNF213Q63HN8 5207 aa0.67□□□□□ -2.3
AC012055.1-201ENST00000511346 C5orf42Q9H799 3197 aa0.66□□□□□ -2.3
AC012055.1-201ENST00000511346 CD52P31358 61 aa0.66□□□□□ -2.3
AC012055.1-201ENST00000511346 LINC01556Q5JQF7 62 aa0.66□□□□□ -2.3
AC012055.1-201ENST00000511346 CFAP46Q8IYW2 2715 aa0.66□□□□□ -2.3
AC012055.1-201ENST00000511346 STAB2Q8WWQ8 2551 aa0.66□□□□□ -2.3
AC012055.1-201ENST00000511346 DMDP11532 3685 aa0.66□□□□□ -2.3
AC012055.1-201ENST00000511346 ITPR2Q14571 2701 aa0.65□□□□□ -2.31
AC012055.1-201ENST00000511346 STATHP02808 62 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms