RNA–Protein interactions for RNA: ENST00000511346.1

AC012055.1-201, humanhuman

TSL 3 BASIC

Gene AC012055.1, Length 1,144 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012055.1-201ENST00000511346 AEBP2Q6ZN18 517 aaPredicted RBP27.86■■■□□ 2.05
AC012055.1-201ENST00000511346 CHIC1Q5VXU3 224 aa26.46■■□□□ 1.83
AC012055.1-201ENST00000511346 SENP3Q9H4L4 574 aaPredicted RBP23.78■■□□□ 1.4
AC012055.1-201ENST00000511346 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
AC012055.1-201ENST00000511346 FOXD1Q16676 465 aa22.16■■□□□ 1.14
AC012055.1-201ENST00000511346 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
AC012055.1-201ENST00000511346 MSH5O43196 834 aa20.76■□□□□ 0.91
AC012055.1-201ENST00000511346 PPP6R1Q9UPN7 881 aa20.7■□□□□ 0.9
AC012055.1-201ENST00000511346 PIAS4Q8N2W9 510 aaPredicted RBP20.69■□□□□ 0.9
AC012055.1-201ENST00000511346 ADRA2BP18089 450 aa20.62■□□□□ 0.89
AC012055.1-201ENST00000511346 POTEDQ86YR6 584 aa20.27■□□□□ 0.84
AC012055.1-201ENST00000511346 MAPK8IP2Q13387 824 aaPredicted RBP18.95■□□□□ 0.62
AC012055.1-201ENST00000511346 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
AC012055.1-201ENST00000511346 DMRT2Q9Y5R5 561 aa18.85■□□□□ 0.61
AC012055.1-201ENST00000511346 PPP4R3CPQ6ZMV5 832 aa18.52■□□□□ 0.56
AC012055.1-201ENST00000511346 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
AC012055.1-201ENST00000511346 HOXD11P31277 338 aaPredicted RBP18.17■□□□□ 0.5
AC012055.1-201ENST00000511346 DCAF8L1A6NGE4 600 aa18.05■□□□□ 0.48
AC012055.1-201ENST00000511346 RNF216Q9NWF9 866 aaPredicted RBP18.02■□□□□ 0.48
AC012055.1-201ENST00000511346 CACNB1Q02641 598 aaPredicted RBP17.81■□□□□ 0.44
AC012055.1-201ENST00000511346 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
AC012055.1-201ENST00000511346 RNF39Q9H2S5 420 aa17.7■□□□□ 0.42
AC012055.1-201ENST00000511346 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
AC012055.1-201ENST00000511346 NPM3O75607 178 aaKnown RBP17.53■□□□□ 0.4
AC012055.1-201ENST00000511346 C1QBPQ07021 282 aaKnown RBP17.46■□□□□ 0.39
AC012055.1-201ENST00000511346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
AC012055.1-201ENST00000511346 KCNA4P22459 653 aa17.18■□□□□ 0.34
AC012055.1-201ENST00000511346 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
AC012055.1-201ENST00000511346 SLC4A2P04920 1241 aa16.75■□□□□ 0.27
AC012055.1-201ENST00000511346 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
AC012055.1-201ENST00000511346 CAPN15O75808 1086 aa16.65■□□□□ 0.26
AC012055.1-201ENST00000511346 DSG3P32926 999 aa16.57■□□□□ 0.24
AC012055.1-201ENST00000511346 APLP2Q06481 763 aa16.48■□□□□ 0.23
AC012055.1-201ENST00000511346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
AC012055.1-201ENST00000511346 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
AC012055.1-201ENST00000511346 TRHP20396 242 aaPredicted RBP16.38■□□□□ 0.21
AC012055.1-201ENST00000511346 ZNF219Q9P2Y4 722 aaPredicted RBP16.37■□□□□ 0.21
AC012055.1-201ENST00000511346 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
AC012055.1-201ENST00000511346 ABCB7O75027 752 aa16.25■□□□□ 0.19
AC012055.1-201ENST00000511346 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
AC012055.1-201ENST00000511346 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
AC012055.1-201ENST00000511346 FOXD4L1Q9NU39 408 aa16.05■□□□□ 0.16
AC012055.1-201ENST00000511346 POLA2Q14181 598 aa15.94■□□□□ 0.14
AC012055.1-201ENST00000511346 POTEHQ6S545 545 aa15.89■□□□□ 0.13
AC012055.1-201ENST00000511346 ATF5Q9Y2D1 282 aaPredicted RBP15.84■□□□□ 0.13
AC012055.1-201ENST00000511346 RBM42Q9BTD8 480 aaKnown RBP15.83■□□□□ 0.12
AC012055.1-201ENST00000511346 ZBTB22O15209 634 aa15.77■□□□□ 0.12
AC012055.1-201ENST00000511346 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
AC012055.1-201ENST00000511346 ATXN8OSP0DMR3 200 aa15.58■□□□□ 0.08
AC012055.1-201ENST00000511346 CHRDL2Q6WN34 429 aa15.47■□□□□ 0.07
AC012055.1-201ENST00000511346 AKT1S1Q96B36 256 aa15.46■□□□□ 0.07
AC012055.1-201ENST00000511346 OSCARQ8IYS5 282 aa15.42■□□□□ 0.06
AC012055.1-201ENST00000511346 REM2Q8IYK8 340 aaPredicted RBP15.3■□□□□ 0.04
AC012055.1-201ENST00000511346 FBLN2P98095 1184 aa15.24■□□□□ 0.03
AC012055.1-201ENST00000511346 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
AC012055.1-201ENST00000511346 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
AC012055.1-201ENST00000511346 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
AC012055.1-201ENST00000511346 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
AC012055.1-201ENST00000511346 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
AC012055.1-201ENST00000511346 PIP4P2Q8N4L2 257 aa15.1■□□□□ 0.01
AC012055.1-201ENST00000511346 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
AC012055.1-201ENST00000511346 FXR2P51116 673 aaKnown RBP eCLIP15.02■□□□□ -0
AC012055.1-201ENST00000511346 ZNF692Q9BU19 519 aaPredicted RBP14.96□□□□□ -0.01
AC012055.1-201ENST00000511346 SSUH2Q9Y2M2 353 aa14.94□□□□□ -0.02
AC012055.1-201ENST00000511346 SPDYE1Q8NFV5 336 aaPredicted RBP14.89□□□□□ -0.03
AC012055.1-201ENST00000511346 SP7Q8TDD2 431 aaPredicted RBP14.89□□□□□ -0.03
AC012055.1-201ENST00000511346 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
AC012055.1-201ENST00000511346 CLEC11AQ9Y240 323 aa14.85□□□□□ -0.03
AC012055.1-201ENST00000511346 HAX1O00165 279 aa14.83□□□□□ -0.04
AC012055.1-201ENST00000511346 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
AC012055.1-201ENST00000511346 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
AC012055.1-201ENST00000511346 EVX2Q03828 476 aa14.64□□□□□ -0.07
AC012055.1-201ENST00000511346 PRR29P0C7W0 189 aa14.61□□□□□ -0.07
AC012055.1-201ENST00000511346 CHADLQ6NUI6 762 aa14.56□□□□□ -0.08
AC012055.1-201ENST00000511346 C19orf67A6NJJ6 358 aa14.53□□□□□ -0.08
AC012055.1-201ENST00000511346 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.1
AC012055.1-201ENST00000511346 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
AC012055.1-201ENST00000511346 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
AC012055.1-201ENST00000511346 GABBR2O75899 941 aa14.32□□□□□ -0.12
AC012055.1-201ENST00000511346 CD44P16070 742 aaKnown RBP14.27□□□□□ -0.13
AC012055.1-201ENST00000511346 CREBZFQ9NS37 354 aa14.24□□□□□ -0.13
AC012055.1-201ENST00000511346 CLCN6P51797 869 aa14.13□□□□□ -0.15
AC012055.1-201ENST00000511346 ZNF579Q8NAF0 562 aaKnown RBP14.07□□□□□ -0.16
AC012055.1-201ENST00000511346 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
AC012055.1-201ENST00000511346 PROM2Q8N271 834 aa14.06□□□□□ -0.16
AC012055.1-201ENST00000511346 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
AC012055.1-201ENST00000511346 MNX1P50219 401 aaPredicted RBP14□□□□□ -0.17
AC012055.1-201ENST00000511346 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
AC012055.1-201ENST00000511346 PAK3O75914 559 aaPredicted RBP13.96□□□□□ -0.17
AC012055.1-201ENST00000511346 LHX8Q68G74 356 aa13.96□□□□□ -0.17
AC012055.1-201ENST00000511346 DCBLD2Q96PD2 775 aa13.93□□□□□ -0.18
AC012055.1-201ENST00000511346 GALR2O43603 387 aaPredicted RBP13.88□□□□□ -0.19
AC012055.1-201ENST00000511346 PHF12Q96QT6 1004 aa13.86□□□□□ -0.19
AC012055.1-201ENST00000511346 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
AC012055.1-201ENST00000511346 MIER1Q8N108 512 aa13.73□□□□□ -0.21
AC012055.1-201ENST00000511346 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
AC012055.1-201ENST00000511346 MS4A3Q96HJ5 214 aa13.69□□□□□ -0.22
AC012055.1-201ENST00000511346 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
AC012055.1-201ENST00000511346 FKBP8Q14318 412 aa13.65□□□□□ -0.22
AC012055.1-201ENST00000511346 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms