RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
LIN54-210ENST00000510877 SACSQ9NZJ4 4579 aa6.5□□□□□ -1.37
LIN54-210ENST00000510877 DYNC2H1Q8NCM8 4307 aaKnown RBP6.49□□□□□ -1.37
LIN54-210ENST00000510877 VPS13DQ5THJ4 4388 aa6.48□□□□□ -1.37
LIN54-210ENST00000510877 M0QZ58 72 aa6.47□□□□□ -1.37
LIN54-210ENST00000510877 LRP1BQ9NZR2 4599 aa6.46□□□□□ -1.37
LIN54-210ENST00000510877 DNAH10Q8IVF4 4471 aa6.46□□□□□ -1.38
LIN54-210ENST00000510877 FAT1Q14517 4588 aa6.45□□□□□ -1.38
LIN54-210ENST00000510877 CSMD3Q7Z407 3707 aa6.4□□□□□ -1.39
LIN54-210ENST00000510877 P0C880 135 aa6.38□□□□□ -1.39
LIN54-210ENST00000510877 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
LIN54-210ENST00000510877 H0YAA0 97 aa6.37□□□□□ -1.39
LIN54-210ENST00000510877 PP632Q6XCG6 107 aa6.36□□□□□ -1.39
LIN54-210ENST00000510877 DNAH3Q8TD57 4116 aa6.32□□□□□ -1.4
LIN54-210ENST00000510877 FAT2Q9NYQ8 4349 aa6.3□□□□□ -1.4
LIN54-210ENST00000510877 CMYA5Q8N3K9 4069 aa6.3□□□□□ -1.4
LIN54-210ENST00000510877 KMT2AQ03164 3969 aa6.29□□□□□ -1.4
LIN54-210ENST00000510877 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
LIN54-210ENST00000510877 DNAH17Q9UFH2 4485 aa6.26□□□□□ -1.41
LIN54-210ENST00000510877 LYSTQ99698 3801 aa6.23□□□□□ -1.41
LIN54-210ENST00000510877 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
LIN54-210ENST00000510877 PRO2289Q9P1D8 64 aa6.18□□□□□ -1.42
LIN54-210ENST00000510877 PCLOQ9Y6V0 5065 aa6.17□□□□□ -1.42
LIN54-210ENST00000510877 TNP1P09430 55 aa6.16□□□□□ -1.42
LIN54-210ENST00000510877 ABCA13Q86UQ4 5058 aa6.11□□□□□ -1.43
LIN54-210ENST00000510877 DNAH2Q9P225 4427 aa6.1□□□□□ -1.43
LIN54-210ENST00000510877 DNAH7Q8WXX0 4024 aa6.09□□□□□ -1.43
LIN54-210ENST00000510877 VPS13BQ7Z7G8 4022 aa6.07□□□□□ -1.44
LIN54-210ENST00000510877 HSPG2P98160 4391 aa6.05□□□□□ -1.44
LIN54-210ENST00000510877 MYCBP2O75592 4640 aa6.02□□□□□ -1.45
LIN54-210ENST00000510877 DNAH6Q9C0G6 4158 aa6□□□□□ -1.45
LIN54-210ENST00000510877 LRP1Q07954 4544 aaKnown RBP5.99□□□□□ -1.45
LIN54-210ENST00000510877 HERC1Q15751 4861 aa5.98□□□□□ -1.45
LIN54-210ENST00000510877 PKHD1P08F94 4074 aa5.98□□□□□ -1.45
LIN54-210ENST00000510877 MT1HP80294 61 aa5.98□□□□□ -1.45
LIN54-210ENST00000510877 KRTAP4-1Q9BYQ7 146 aa5.98□□□□□ -1.45
LIN54-210ENST00000510877 KRTAP10-6P60371 365 aaPredicted RBP5.94□□□□□ -1.46
LIN54-210ENST00000510877 FAT3Q8TDW7 4589 aa5.94□□□□□ -1.46
LIN54-210ENST00000510877 LRP2P98164 4655 aa5.93□□□□□ -1.46
LIN54-210ENST00000510877 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
LIN54-210ENST00000510877 KRTAP9-2Q9BYQ4 174 aa5.87□□□□□ -1.47
LIN54-210ENST00000510877 UBR4Q5T4S7 5183 aa5.83□□□□□ -1.48
LIN54-210ENST00000510877 DNAH8Q96JB1 4490 aa5.81□□□□□ -1.48
LIN54-210ENST00000510877 INE1O15225 51 aa5.79□□□□□ -1.48
LIN54-210ENST00000510877 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
LIN54-210ENST00000510877 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
LIN54-210ENST00000510877 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
LIN54-210ENST00000510877 HECTD4Q9Y4D8 3996 aa5.77□□□□□ -1.49
LIN54-210ENST00000510877 KRTAP9-6A0A140TA67 174 aa5.75□□□□□ -1.49
LIN54-210ENST00000510877 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
LIN54-210ENST00000510877 KRTAP13-4Q3LI77 160 aa5.73□□□□□ -1.49
LIN54-210ENST00000510877 PKD1P98161 4303 aa5.72□□□□□ -1.49
LIN54-210ENST00000510877 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
LIN54-210ENST00000510877 MT2AP02795 61 aa5.69□□□□□ -1.5
LIN54-210ENST00000510877 RNF213Q63HN8 5207 aa5.69□□□□□ -1.5
LIN54-210ENST00000510877 FRAS1Q86XX4 4008 aa5.68□□□□□ -1.5
LIN54-210ENST00000510877 KRTAP3-1Q9BYR8 98 aa5.63□□□□□ -1.51
LIN54-210ENST00000510877 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
LIN54-210ENST00000510877 MT1FP04733 61 aa5.57□□□□□ -1.52
LIN54-210ENST00000510877 HMCN2Q8NDA2 5059 aa5.57□□□□□ -1.52
LIN54-210ENST00000510877 LCE2AQ5TA79 106 aaPredicted RBP5.54□□□□□ -1.52
LIN54-210ENST00000510877 LCE2DQ5TA82 110 aaPredicted RBP5.5□□□□□ -1.53
LIN54-210ENST00000510877 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
LIN54-210ENST00000510877 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.54
LIN54-210ENST00000510877 FAT4Q6V0I7 4981 aa5.42□□□□□ -1.54
LIN54-210ENST00000510877 LPAP08519 4548 aa5.41□□□□□ -1.54
LIN54-210ENST00000510877 KRTAP19-1Q8IUB9 90 aa5.37□□□□□ -1.55
LIN54-210ENST00000510877 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
LIN54-210ENST00000510877 KRTAP3-3Q9BYR6 98 aa5.36□□□□□ -1.55
LIN54-210ENST00000510877 KRTAP3-2Q9BYR7 98 aa5.35□□□□□ -1.55
LIN54-210ENST00000510877 SPRR2FQ96RM1 72 aa5.33□□□□□ -1.56
LIN54-210ENST00000510877 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
LIN54-210ENST00000510877 KRTAP19-2Q3LHN2 52 aa5.27□□□□□ -1.57
LIN54-210ENST00000510877 KRTAP9-7A8MTY7 169 aa5.27□□□□□ -1.57
LIN54-210ENST00000510877 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
LIN54-210ENST00000510877 KRTAP9-3Q9BYQ3 159 aa5.24□□□□□ -1.57
LIN54-210ENST00000510877 KRTAP10-12P60413 245 aa5.24□□□□□ -1.57
LIN54-210ENST00000510877 TNXBP22105 4242 aa5.23□□□□□ -1.57
LIN54-210ENST00000510877 LCE2BO14633 110 aa5.16□□□□□ -1.58
LIN54-210ENST00000510877 SPRR2EP22531 72 aa5.16□□□□□ -1.58
LIN54-210ENST00000510877 SPRR2BP35325 72 aa5.16□□□□□ -1.58
LIN54-210ENST00000510877 SPRR2AP35326 72 aa5.16□□□□□ -1.58
LIN54-210ENST00000510877 KRTAP10-5P60370 271 aa5.1□□□□□ -1.59
LIN54-210ENST00000510877 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.59
LIN54-210ENST00000510877 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.09□□□□□ -1.59
LIN54-210ENST00000510877 MUC2Q02817 5179 aa5.08□□□□□ -1.6
LIN54-210ENST00000510877 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
LIN54-210ENST00000510877 SPRR2DP22532 72 aa5□□□□□ -1.61
LIN54-210ENST00000510877 MT1BP07438 61 aa5□□□□□ -1.61
LIN54-210ENST00000510877 MUC17Q685J3 4493 aa4.95□□□□□ -1.62
LIN54-210ENST00000510877 FLGP20930 4061 aaPredicted RBP4.92□□□□□ -1.62
LIN54-210ENST00000510877 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
LIN54-210ENST00000510877 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
LIN54-210ENST00000510877 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
LIN54-210ENST00000510877 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
LIN54-210ENST00000510877 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
LIN54-210ENST00000510877 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
LIN54-210ENST00000510877 MT1XP80297 61 aa4.79□□□□□ -1.64
LIN54-210ENST00000510877 KRTAP4-8A0A0G2JLE6 195 aa4.71□□□□□ -1.66
LIN54-210ENST00000510877 KRTAP4-8Q9BYQ9 185 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms