RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 KRTAP2-3P0C7H8 128 aa4.67□□□□□ -1.66
LIN54-210ENST00000510877 KRTAP2-4Q9BYR9 128 aa4.67□□□□□ -1.66
LIN54-210ENST00000510877 KRTAP19-5Q3LI72 72 aa4.66□□□□□ -1.66
LIN54-210ENST00000510877 USH2AO75445 5202 aa4.65□□□□□ -1.67
LIN54-210ENST00000510877 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
LIN54-210ENST00000510877 MT1GP13640 62 aa4.56□□□□□ -1.68
LIN54-210ENST00000510877 FCGBPQ9Y6R7 5405 aaPredicted RBP4.56□□□□□ -1.68
LIN54-210ENST00000510877 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
LIN54-210ENST00000510877 KMT2DO14686 5537 aa4.54□□□□□ -1.68
LIN54-210ENST00000510877 MACF1Q9UPN3 7388 aaKnown RBP4.54□□□□□ -1.68
LIN54-210ENST00000510877 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
LIN54-210ENST00000510877 KRTAP2-1Q9BYU5 128 aa4.52□□□□□ -1.69
LIN54-210ENST00000510877 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
LIN54-210ENST00000510877 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
LIN54-210ENST00000510877 SSPOA2VEC9 5147 aa4.46□□□□□ -1.7
LIN54-210ENST00000510877 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
LIN54-210ENST00000510877 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
LIN54-210ENST00000510877 NEBP20929 6669 aa4.42□□□□□ -1.7
LIN54-210ENST00000510877 MT4P47944 62 aa4.41□□□□□ -1.7
LIN54-210ENST00000510877 MT1EP04732 61 aa4.35□□□□□ -1.71
LIN54-210ENST00000510877 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
LIN54-210ENST00000510877 SYNE1Q8NF91 8797 aaKnown RBP4.32□□□□□ -1.72
LIN54-210ENST00000510877 KRTAP5-9P26371 169 aa4.25□□□□□ -1.73
LIN54-210ENST00000510877 MT1LQ93083 61 aa4.23□□□□□ -1.73
LIN54-210ENST00000510877 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
LIN54-210ENST00000510877 MT1MQ8N339 61 aa4.22□□□□□ -1.73
LIN54-210ENST00000510877 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
LIN54-210ENST00000510877 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
LIN54-210ENST00000510877 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
LIN54-210ENST00000510877 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
LIN54-210ENST00000510877 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
LIN54-210ENST00000510877 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
LIN54-210ENST00000510877 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
LIN54-210ENST00000510877 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
LIN54-210ENST00000510877 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
LIN54-210ENST00000510877 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
LIN54-210ENST00000510877 LCE1DQ5T752 114 aa3.85□□□□□ -1.79
LIN54-210ENST00000510877 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
LIN54-210ENST00000510877 MT3P25713 68 aa3.83□□□□□ -1.8
LIN54-210ENST00000510877 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
LIN54-210ENST00000510877 LOC100996750A0A140TA64 210 aa3.82□□□□□ -1.8
LIN54-210ENST00000510877 MT1AP04731 61 aa3.75□□□□□ -1.81
LIN54-210ENST00000510877 KRTAP4-6Q9BYQ5 205 aa3.64□□□□□ -1.83
LIN54-210ENST00000510877 PRM1P04553 51 aa3.63□□□□□ -1.83
LIN54-210ENST00000510877 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
LIN54-210ENST00000510877 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
LIN54-210ENST00000510877 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
LIN54-210ENST00000510877 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
LIN54-210ENST00000510877 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
LIN54-210ENST00000510877 KRTAP9-4Q9BYQ2 154 aa3.51□□□□□ -1.85
LIN54-210ENST00000510877 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
LIN54-210ENST00000510877 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
LIN54-210ENST00000510877 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
LIN54-210ENST00000510877 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
LIN54-210ENST00000510877 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
LIN54-210ENST00000510877 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
LIN54-210ENST00000510877 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
LIN54-210ENST00000510877 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
LIN54-210ENST00000510877 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
LIN54-210ENST00000510877 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
LIN54-210ENST00000510877 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
LIN54-210ENST00000510877 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
LIN54-210ENST00000510877 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
LIN54-210ENST00000510877 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
LIN54-210ENST00000510877 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
LIN54-210ENST00000510877 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
LIN54-210ENST00000510877 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.96
LIN54-210ENST00000510877 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.96
LIN54-210ENST00000510877 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
LIN54-210ENST00000510877 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
LIN54-210ENST00000510877 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
LIN54-210ENST00000510877 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
LIN54-210ENST00000510877 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
LIN54-210ENST00000510877 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
LIN54-210ENST00000510877 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
LIN54-210ENST00000510877 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
LIN54-210ENST00000510877 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
LIN54-210ENST00000510877 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 56.4 ms