RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 DNAH1Q9P2D7 4330 aa2.46□□□□□ -2.02
LINC01088-205ENST00000509088 MAST4O15021 2626 aa2.46□□□□□ -2.02
LINC01088-205ENST00000509088 M0QZ58 72 aa2.45□□□□□ -2.02
LINC01088-205ENST00000509088 Q6ZRN7 208 aaPredicted RBP2.45□□□□□ -2.02
LINC01088-205ENST00000509088 APLNQ9ULZ1 77 aa2.45□□□□□ -2.02
LINC01088-205ENST00000509088 TENM4Q6N022 2769 aa2.45□□□□□ -2.02
LINC01088-205ENST00000509088 VPS13CQ709C8 3753 aa2.45□□□□□ -2.02
LINC01088-205ENST00000509088 INE1O15225 51 aa2.44□□□□□ -2.02
LINC01088-205ENST00000509088 UBE2DNLQ8IWF7 75 aa2.44□□□□□ -2.02
LINC01088-205ENST00000509088 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
LINC01088-205ENST00000509088 ITPR3Q14573 2671 aa2.44□□□□□ -2.02
LINC01088-205ENST00000509088 POLQO75417 2590 aa2.42□□□□□ -2.02
LINC01088-205ENST00000509088 MUC3AQ02505 3323 aa2.41□□□□□ -2.02
LINC01088-205ENST00000509088 MYO18BQ8IUG5 2567 aa2.41□□□□□ -2.02
LINC01088-205ENST00000509088 COL6A5A8TX70 2615 aa2.4□□□□□ -2.02
LINC01088-205ENST00000509088 ANK3Q12955 4377 aaKnown RBP2.4□□□□□ -2.02
LINC01088-205ENST00000509088 TGP01266 2768 aa2.4□□□□□ -2.02
LINC01088-205ENST00000509088 A0A0D9SG42 100 aa2.4□□□□□ -2.03
LINC01088-205ENST00000509088 KRTAP13-2Q52LG2 175 aa2.4□□□□□ -2.03
LINC01088-205ENST00000509088 ATRQ13535 2644 aa2.39□□□□□ -2.03
LINC01088-205ENST00000509088 ITPR2Q14571 2701 aa2.39□□□□□ -2.03
LINC01088-205ENST00000509088 PKD1L1Q8TDX9 2849 aa2.39□□□□□ -2.03
LINC01088-205ENST00000509088 FAM208BQ5VWN6 2430 aa2.39□□□□□ -2.03
LINC01088-205ENST00000509088 FBN1P35555 2871 aaKnown RBP2.39□□□□□ -2.03
LINC01088-205ENST00000509088 TRRAPQ9Y4A5 3859 aa2.39□□□□□ -2.03
LINC01088-205ENST00000509088 FLNCQ14315 2725 aa2.38□□□□□ -2.03
LINC01088-205ENST00000509088 KRTAP12-1P59990 96 aa2.38□□□□□ -2.03
LINC01088-205ENST00000509088 PDZD2O15018 2839 aa2.38□□□□□ -2.03
LINC01088-205ENST00000509088 FLNBO75369 2602 aaKnown RBP2.38□□□□□ -2.03
LINC01088-205ENST00000509088 FLNAP21333 2647 aaKnown RBP2.38□□□□□ -2.03
LINC01088-205ENST00000509088 TEP1Q99973 2627 aaKnown RBP2.38□□□□□ -2.03
LINC01088-205ENST00000509088 CSMD2Q7Z408 3487 aa2.37□□□□□ -2.03
LINC01088-205ENST00000509088 KRTAP13-4Q3LI77 160 aa2.36□□□□□ -2.03
LINC01088-205ENST00000509088 FRAS1Q86XX4 4008 aa2.36□□□□□ -2.03
LINC01088-205ENST00000509088 VPS13DQ5THJ4 4388 aa2.35□□□□□ -2.03
LINC01088-205ENST00000509088 DNAH3Q8TD57 4116 aa2.35□□□□□ -2.03
LINC01088-205ENST00000509088 LYSTQ99698 3801 aa2.33□□□□□ -2.04
LINC01088-205ENST00000509088 R4GN34 69 aa2.33□□□□□ -2.04
LINC01088-205ENST00000509088 DMBT1Q9UGM3 2413 aaPredicted RBP2.33□□□□□ -2.04
LINC01088-205ENST00000509088 NOTCH1P46531 2555 aa2.32□□□□□ -2.04
LINC01088-205ENST00000509088 DNAH8Q96JB1 4490 aa2.32□□□□□ -2.04
LINC01088-205ENST00000509088 COL7A1Q02388 2944 aa2.31□□□□□ -2.04
LINC01088-205ENST00000509088 TENM3Q9P273 2699 aa2.31□□□□□ -2.04
LINC01088-205ENST00000509088 ANK2Q01484 3957 aa2.31□□□□□ -2.04
LINC01088-205ENST00000509088 FBN3Q75N90 2809 aa2.3□□□□□ -2.04
LINC01088-205ENST00000509088 DNAH6Q9C0G6 4158 aa2.29□□□□□ -2.04
LINC01088-205ENST00000509088 DYNC2H1Q8NCM8 4307 aaKnown RBP2.29□□□□□ -2.04
LINC01088-205ENST00000509088 DNAH7Q8WXX0 4024 aa2.29□□□□□ -2.04
LINC01088-205ENST00000509088 STAB2Q8WWQ8 2551 aa2.29□□□□□ -2.04
LINC01088-205ENST00000509088 CMYA5Q8N3K9 4069 aa2.29□□□□□ -2.04
LINC01088-205ENST00000509088 HECTD4Q9Y4D8 3996 aa2.28□□□□□ -2.04
LINC01088-205ENST00000509088 USP24Q9UPU5 2620 aa2.28□□□□□ -2.04
LINC01088-205ENST00000509088 PRKDCP78527 4128 aaKnown RBP2.27□□□□□ -2.05
LINC01088-205ENST00000509088 Q5VSD8 79 aa2.26□□□□□ -2.05
LINC01088-205ENST00000509088 DNAH17Q9UFH2 4485 aa2.26□□□□□ -2.05
LINC01088-205ENST00000509088 IGSF10Q6WRI0 2623 aa2.26□□□□□ -2.05
LINC01088-205ENST00000509088 DNAH10Q8IVF4 4471 aa2.26□□□□□ -2.05
LINC01088-205ENST00000509088 MGAM2Q2M2H8 2515 aa2.25□□□□□ -2.05
LINC01088-205ENST00000509088 TENM1Q9UKZ4 2725 aa2.24□□□□□ -2.05
LINC01088-205ENST00000509088 NSD1Q96L73 2696 aaPredicted RBP2.24□□□□□ -2.05
LINC01088-205ENST00000509088 DNAH2Q9P225 4427 aa2.24□□□□□ -2.05
LINC01088-205ENST00000509088 STAB1Q9NY15 2570 aa2.24□□□□□ -2.05
LINC01088-205ENST00000509088 DNAH9Q9NYC9 4486 aa2.23□□□□□ -2.05
LINC01088-205ENST00000509088 CUBNO60494 3623 aa2.22□□□□□ -2.05
LINC01088-205ENST00000509088 CSMD3Q7Z407 3707 aa2.22□□□□□ -2.05
LINC01088-205ENST00000509088 KRTAP21-3Q3LHN1 58 aa2.22□□□□□ -2.05
LINC01088-205ENST00000509088 SMR3AQ99954 134 aa2.22□□□□□ -2.05
LINC01088-205ENST00000509088 DNAH11Q96DT5 4516 aa2.22□□□□□ -2.05
LINC01088-205ENST00000509088 C9orf92A6NGG3 77 aa2.2□□□□□ -2.06
LINC01088-205ENST00000509088 HUWE1Q7Z6Z7 4374 aaKnown RBP2.17□□□□□ -2.06
LINC01088-205ENST00000509088 TNP1P09430 55 aa2.17□□□□□ -2.06
LINC01088-205ENST00000509088 ZNF469Q96JG9 3925 aaPredicted RBP2.16□□□□□ -2.06
LINC01088-205ENST00000509088 SACSQ9NZJ4 4579 aa2.13□□□□□ -2.07
LINC01088-205ENST00000509088 CRCT1Q9UGL9 99 aa2.11□□□□□ -2.07
LINC01088-205ENST00000509088 PLECQ15149 4684 aaKnown RBP2.1□□□□□ -2.07
LINC01088-205ENST00000509088 KMT2AQ03164 3969 aa2.09□□□□□ -2.07
LINC01088-205ENST00000509088 PKHD1L1Q86WI1 4243 aa2.08□□□□□ -2.08
LINC01088-205ENST00000509088 J3QKU1 62 aa2.08□□□□□ -2.08
LINC01088-205ENST00000509088 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
LINC01088-205ENST00000509088 VPS13BQ7Z7G8 4022 aa2.07□□□□□ -2.08
LINC01088-205ENST00000509088 PKD1P98161 4303 aa2.05□□□□□ -2.08
LINC01088-205ENST00000509088 KRTAP4-1Q9BYQ7 146 aa2.05□□□□□ -2.08
LINC01088-205ENST00000509088 MYCBP2O75592 4640 aa2.05□□□□□ -2.08
LINC01088-205ENST00000509088 PKHD1P08F94 4074 aa2.04□□□□□ -2.08
LINC01088-205ENST00000509088 DNAH5Q8TE73 4624 aa2.03□□□□□ -2.08
LINC01088-205ENST00000509088 APOBP04114 4563 aaKnown RBP2.03□□□□□ -2.08
LINC01088-205ENST00000509088 LRP1BQ9NZR2 4599 aa2.03□□□□□ -2.09
LINC01088-205ENST00000509088 LRP1Q07954 4544 aaKnown RBP2.03□□□□□ -2.09
LINC01088-205ENST00000509088 FLGP20930 4061 aaPredicted RBP2.02□□□□□ -2.09
LINC01088-205ENST00000509088 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
LINC01088-205ENST00000509088 DNHD1Q96M86 4753 aa2.02□□□□□ -2.09
LINC01088-205ENST00000509088 DYNC1H1Q14204 4646 aaKnown RBP2.01□□□□□ -2.09
LINC01088-205ENST00000509088 TNXBP22105 4242 aa2.01□□□□□ -2.09
LINC01088-205ENST00000509088 FAT2Q9NYQ8 4349 aa1.98□□□□□ -2.09
LINC01088-205ENST00000509088 HSPG2P98160 4391 aa1.97□□□□□ -2.09
LINC01088-205ENST00000509088 KRTAP12-3P60328 96 aa1.96□□□□□ -2.1
LINC01088-205ENST00000509088 STARD9Q9P2P6 4700 aa1.96□□□□□ -2.1
LINC01088-205ENST00000509088 FCGBPQ9Y6R7 5405 aaPredicted RBP1.95□□□□□ -2.1
LINC01088-205ENST00000509088 KRTAP10-4P60372 401 aaPredicted RBP1.94□□□□□ -2.1
LINC01088-205ENST00000509088 FAT3Q8TDW7 4589 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms