RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 VPS13DQ5THJ4 4388 aa2.63□□□□□ -1.99
HMGB3P16-201ENST00000508037 COL7A1Q02388 2944 aa2.62□□□□□ -1.99
HMGB3P16-201ENST00000508037 DNAH7Q8WXX0 4024 aa2.61□□□□□ -1.99
HMGB3P16-201ENST00000508037 DNAH6Q9C0G6 4158 aa2.61□□□□□ -1.99
HMGB3P16-201ENST00000508037 PLECQ15149 4684 aaKnown RBP2.61□□□□□ -1.99
HMGB3P16-201ENST00000508037 DNAH17Q9UFH2 4485 aa2.61□□□□□ -1.99
HMGB3P16-201ENST00000508037 CSMD3Q7Z407 3707 aa2.6□□□□□ -1.99
HMGB3P16-201ENST00000508037 FRAS1Q86XX4 4008 aa2.6□□□□□ -1.99
HMGB3P16-201ENST00000508037 TGP01266 2768 aa2.6□□□□□ -1.99
HMGB3P16-201ENST00000508037 DNAH8Q96JB1 4490 aa2.6□□□□□ -1.99
HMGB3P16-201ENST00000508037 MEGF8Q7Z7M0 2845 aa2.6□□□□□ -1.99
HMGB3P16-201ENST00000508037 STARD9Q9P2P6 4700 aa2.59□□□□□ -1.99
HMGB3P16-201ENST00000508037 PRKDCP78527 4128 aaKnown RBP2.59□□□□□ -1.99
HMGB3P16-201ENST00000508037 S4R3F8 94 aa2.58□□□□□ -2
HMGB3P16-201ENST00000508037 SMR3BP02814 79 aaPredicted RBP2.56□□□□□ -2
HMGB3P16-201ENST00000508037 CRIPTQ9P021 101 aa2.56□□□□□ -2
HMGB3P16-201ENST00000508037 KRTAP10-6P60371 365 aaPredicted RBP2.55□□□□□ -2
HMGB3P16-201ENST00000508037 KRTAP10-4P60372 401 aaPredicted RBP2.55□□□□□ -2
HMGB3P16-201ENST00000508037 SPINT4Q6UDR6 99 aa2.55□□□□□ -2
HMGB3P16-201ENST00000508037 KMT2AQ03164 3969 aa2.55□□□□□ -2
HMGB3P16-201ENST00000508037 DNAH2Q9P225 4427 aa2.54□□□□□ -2
HMGB3P16-201ENST00000508037 FBN3Q75N90 2809 aa2.54□□□□□ -2
HMGB3P16-201ENST00000508037 A0A0D9SG42 100 aa2.53□□□□□ -2
HMGB3P16-201ENST00000508037 A0A1B0GVY2 172 aa2.53□□□□□ -2
HMGB3P16-201ENST00000508037 KRTAP2-2Q9BYT5 123 aa2.53□□□□□ -2
HMGB3P16-201ENST00000508037 DNAH11Q96DT5 4516 aa2.52□□□□□ -2.01
HMGB3P16-201ENST00000508037 M0QZ58 72 aa2.52□□□□□ -2.01
HMGB3P16-201ENST00000508037 KRTAP21-3Q3LHN1 58 aa2.52□□□□□ -2.01
HMGB3P16-201ENST00000508037 KRTAP10-8P60410 259 aa2.5□□□□□ -2.01
HMGB3P16-201ENST00000508037 TPRXLQ17RH7 258 aa2.5□□□□□ -2.01
HMGB3P16-201ENST00000508037 KRTAP13-4Q3LI77 160 aa2.5□□□□□ -2.01
HMGB3P16-201ENST00000508037 DNAH5Q8TE73 4624 aa2.49□□□□□ -2.01
HMGB3P16-201ENST00000508037 P0C880 135 aa2.49□□□□□ -2.01
HMGB3P16-201ENST00000508037 VPS13BQ7Z7G8 4022 aa2.49□□□□□ -2.01
HMGB3P16-201ENST00000508037 SACSQ9NZJ4 4579 aa2.47□□□□□ -2.01
HMGB3P16-201ENST00000508037 MT3P25713 68 aa2.47□□□□□ -2.01
HMGB3P16-201ENST00000508037 FLG2Q5D862 2391 aaPredicted RBP2.46□□□□□ -2.01
HMGB3P16-201ENST00000508037 KRTAP12-1P59990 96 aa2.46□□□□□ -2.02
HMGB3P16-201ENST00000508037 KRTAP12-2P59991 146 aa2.45□□□□□ -2.02
HMGB3P16-201ENST00000508037 KRTAP10-7P60409 375 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P16-201ENST00000508037 LRP1BQ9NZR2 4599 aa2.45□□□□□ -2.02
HMGB3P16-201ENST00000508037 PKD1P98161 4303 aa2.44□□□□□ -2.02
HMGB3P16-201ENST00000508037 Q5VSD8 79 aa2.44□□□□□ -2.02
HMGB3P16-201ENST00000508037 DMBT1Q9UGM3 2413 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P16-201ENST00000508037 PKHD1L1Q86WI1 4243 aa2.43□□□□□ -2.02
HMGB3P16-201ENST00000508037 C10orf95Q9H7T3 257 aa2.43□□□□□ -2.02
HMGB3P16-201ENST00000508037 A0A0A0MQY5 61 aa2.42□□□□□ -2.02
HMGB3P16-201ENST00000508037 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
HMGB3P16-201ENST00000508037 PKHD1P08F94 4074 aa2.41□□□□□ -2.02
HMGB3P16-201ENST00000508037 FAT2Q9NYQ8 4349 aa2.41□□□□□ -2.02
HMGB3P16-201ENST00000508037 R4GN34 69 aa2.4□□□□□ -2.03
HMGB3P16-201ENST00000508037 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
HMGB3P16-201ENST00000508037 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
HMGB3P16-201ENST00000508037 APOBP04114 4563 aaKnown RBP2.36□□□□□ -2.03
HMGB3P16-201ENST00000508037 MT1HL1P0DM35 61 aa2.36□□□□□ -2.03
HMGB3P16-201ENST00000508037 SEC61BP60468 96 aaKnown RBP2.36□□□□□ -2.03
HMGB3P16-201ENST00000508037 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P16-201ENST00000508037 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
HMGB3P16-201ENST00000508037 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
HMGB3P16-201ENST00000508037 DYNC1H1Q14204 4646 aaKnown RBP2.34□□□□□ -2.03
HMGB3P16-201ENST00000508037 HYDINQ4G0P3 5121 aa2.33□□□□□ -2.04
HMGB3P16-201ENST00000508037 LUZP6Q538Z0 58 aa2.32□□□□□ -2.04
HMGB3P16-201ENST00000508037 TNXBP22105 4242 aa2.32□□□□□ -2.04
HMGB3P16-201ENST00000508037 DNHD1Q96M86 4753 aa2.31□□□□□ -2.04
HMGB3P16-201ENST00000508037 CAMK2N1Q7Z7J9 78 aa2.29□□□□□ -2.04
HMGB3P16-201ENST00000508037 FAT1Q14517 4588 aa2.29□□□□□ -2.04
HMGB3P16-201ENST00000508037 LRP1Q07954 4544 aaKnown RBP2.27□□□□□ -2.05
HMGB3P16-201ENST00000508037 FAT3Q8TDW7 4589 aa2.27□□□□□ -2.05
HMGB3P16-201ENST00000508037 HSPG2P98160 4391 aa2.24□□□□□ -2.05
HMGB3P16-201ENST00000508037 TNP1P09430 55 aa2.24□□□□□ -2.05
HMGB3P16-201ENST00000508037 RYR2Q92736 4967 aa2.22□□□□□ -2.05
HMGB3P16-201ENST00000508037 KRTAP10-5P60370 271 aa2.19□□□□□ -2.06
HMGB3P16-201ENST00000508037 MYCBP2O75592 4640 aa2.18□□□□□ -2.06
HMGB3P16-201ENST00000508037 RYR1P21817 5038 aa2.18□□□□□ -2.06
HMGB3P16-201ENST00000508037 KRTAP4-1Q9BYQ7 146 aa2.17□□□□□ -2.06
HMGB3P16-201ENST00000508037 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
HMGB3P16-201ENST00000508037 KRTAP19-2Q3LHN2 52 aa2.16□□□□□ -2.06
HMGB3P16-201ENST00000508037 KRTAP10-12P60413 245 aa2.15□□□□□ -2.07
HMGB3P16-201ENST00000508037 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
HMGB3P16-201ENST00000508037 SPRR2GQ9BYE4 73 aa2.1□□□□□ -2.07
HMGB3P16-201ENST00000508037 KMT2CQ8NEZ4 4911 aaKnown RBP2.09□□□□□ -2.07
HMGB3P16-201ENST00000508037 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
HMGB3P16-201ENST00000508037 LRP2P98164 4655 aa2.09□□□□□ -2.08
HMGB3P16-201ENST00000508037 KRTAP9-6A8MVA2 160 aa2.08□□□□□ -2.08
HMGB3P16-201ENST00000508037 RYR3Q15413 4870 aa2.07□□□□□ -2.08
HMGB3P16-201ENST00000508037 INE1O15225 51 aa2.06□□□□□ -2.08
HMGB3P16-201ENST00000508037 PRO2289Q9P1D8 64 aa2.05□□□□□ -2.08
HMGB3P16-201ENST00000508037 LPAP08519 4548 aa2.04□□□□□ -2.08
HMGB3P16-201ENST00000508037 FLGP20930 4061 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P16-201ENST00000508037 M0R2T5 61 aa2.03□□□□□ -2.08
HMGB3P16-201ENST00000508037 LCE3CQ5T5A8 94 aa2.03□□□□□ -2.08
HMGB3P16-201ENST00000508037 LCE3AQ5TA76 89 aa2.03□□□□□ -2.08
HMGB3P16-201ENST00000508037 KIAA1109Q2LD37 5005 aa2.03□□□□□ -2.08
HMGB3P16-201ENST00000508037 MUC17Q685J3 4493 aa2.03□□□□□ -2.08
HMGB3P16-201ENST00000508037 KRTAP8-1Q8IUC2 63 aa2.02□□□□□ -2.09
HMGB3P16-201ENST00000508037 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
HMGB3P16-201ENST00000508037 KRTAP10-10P60014 251 aa1.99□□□□□ -2.09
HMGB3P16-201ENST00000508037 KRTAP19-8Q3LI54 63 aa1.99□□□□□ -2.09
HMGB3P16-201ENST00000508037 HERC1Q15751 4861 aa1.98□□□□□ -2.09
HMGB3P16-201ENST00000508037 KRTAP5-4Q6L8H1 288 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms