RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 SPTBN5Q9NRC6 3674 aaKnown RBP0.13□□□□□ -2.39
CDC42SE2-210ENST00000506929 TRRAPQ9Y4A5 3859 aa0.13□□□□□ -2.39
CDC42SE2-210ENST00000506929 CMYA5Q8N3K9 4069 aa0.13□□□□□ -2.39
CDC42SE2-210ENST00000506929 COL7A1Q02388 2944 aa0.13□□□□□ -2.39
CDC42SE2-210ENST00000506929 ACANP16112 2415 aa0.13□□□□□ -2.39
CDC42SE2-210ENST00000506929 SPTBN1Q01082 2364 aaKnown RBP0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 ATRQ13535 2644 aa0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 LPAP08519 4548 aa0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 FAM208BQ5VWN6 2430 aa0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 ACACAQ13085 2346 aa0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 C5orf42Q9H799 3197 aa0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 DNHD1Q96M86 4753 aa0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 SPINK6Q6UWN8 80 aa0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 C4orf3Q8WVX3 66 aa0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 POLQO75417 2590 aa0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 SVEP1Q4LDE5 3571 aa0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 NF1P21359 2839 aa0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 FLNCQ14315 2725 aa0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 MUC17Q685J3 4493 aa0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 DMBT1Q9UGM3 2413 aaPredicted RBP0.12□□□□□ -2.39
CDC42SE2-210ENST00000506929 STARD9Q9P2P6 4700 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 DMDP11532 3685 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 A0A096LPF7 62 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 LYNX1G3V0Z9 82 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 M0QY20 66 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 HTN1P15515 57 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 SPINK13Q1W4C9 94 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 DEFB114Q30KQ6 69 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 DEFB109BQ30KR1 87 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 AKAP6Q13023 2319 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 GCN1Q92616 2671 aaKnown RBP0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 TACC2O95359 2948 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 VPS13CQ709C8 3753 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 A0A0C4DFX4 3053 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 CFAP54Q96N23 3096 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 LAMA5O15230 3695 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 SMG1Q96Q15 3661 aaKnown RBP0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 NBASA2RRP1 2371 aa0.11□□□□□ -2.39
CDC42SE2-210ENST00000506929 PKD1L1Q8TDX9 2849 aa0.1□□□□□ -2.39
CDC42SE2-210ENST00000506929 MXRA5Q9NR99 2828 aa0.1□□□□□ -2.39
CDC42SE2-210ENST00000506929 DNAH12Q6ZR08 3092 aa0.1□□□□□ -2.39
CDC42SE2-210ENST00000506929 ADGRG4Q8IZF6 3080 aa0.1□□□□□ -2.39
CDC42SE2-210ENST00000506929 RELNP78509 3460 aa0.1□□□□□ -2.39
CDC42SE2-210ENST00000506929 HRNRQ86YZ3 2850 aaPredicted RBP0.1□□□□□ -2.39
CDC42SE2-210ENST00000506929 H3BNG1 76 aa0.1□□□□□ -2.39
CDC42SE2-210ENST00000506929 KRTAP6-2Q3LI66 62 aa0.1□□□□□ -2.39
CDC42SE2-210ENST00000506929 USMG5Q96IX5 58 aa0.1□□□□□ -2.39
CDC42SE2-210ENST00000506929 LAMA1P25391 3075 aa0.1□□□□□ -2.39
CDC42SE2-210ENST00000506929 ITPR3Q14573 2671 aa0.1□□□□□ -2.39
CDC42SE2-210ENST00000506929 ZZEF1O43149 2961 aa0.09□□□□□ -2.39
CDC42SE2-210ENST00000506929 LRBAP50851 2863 aa0.09□□□□□ -2.39
CDC42SE2-210ENST00000506929 WDR87Q6ZQQ6 2873 aa0.09□□□□□ -2.39
CDC42SE2-210ENST00000506929 CELSR3Q9NYQ7 3312 aa0.09□□□□□ -2.39
CDC42SE2-210ENST00000506929 PRUNE2Q8WUY3 3088 aa0.09□□□□□ -2.39
CDC42SE2-210ENST00000506929 K7EIM0 57 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 MRPL33O75394 65 aaKnown RBP0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 SMR3BP02814 79 aaPredicted RBP0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 LRP2P98164 4655 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 PRCDQ00LT1 54 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 DEFB135Q30KP9 77 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 DEFB110Q30KQ9 67 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 Q5VSD8 79 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 SPG11Q96JI7 2443 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 SYNE1Q8NF91 8797 aaKnown RBP0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 APC2O95996 2303 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 CEP290O15078 2479 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 RIF1Q5UIP0 2472 aaKnown RBP0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 BDP1A6H8Y1 2624 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 ITPR1Q14643 2758 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 CEP350Q5VT06 3117 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 CFAP47Q6ZTR5 3102 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 MKI67P46013 3256 aaKnown RBP0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 CSMD1Q96PZ7 3565 aa0.09□□□□□ -2.4
CDC42SE2-210ENST00000506929 RANBP2P49792 3224 aaKnown RBP0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 ATMQ13315 3056 aa0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 MAP1AP78559 2803 aaPredicted RBP0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 CSMD2Q7Z408 3487 aa0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 FRYLO94915 3013 aa0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 M0QZ58 72 aa0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 M0R2T5 61 aa0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 DEFB108BQ8NET1 73 aa0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 TRIOO75962 3097 aa0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 NBEAQ8NFP9 2946 aa0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 TEX15Q9BXT5 2789 aa0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 MAP1BP46821 2468 aaKnown RBP0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 LAMA3Q16787 3333 aa0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 SRCAPQ6ZRS2 3230 aa0.08□□□□□ -2.4
CDC42SE2-210ENST00000506929 BOD1L1Q8NFC6 3051 aa0.07□□□□□ -2.4
CDC42SE2-210ENST00000506929 EPG5Q9HCE0 2579 aa0.07□□□□□ -2.4
CDC42SE2-210ENST00000506929 DEFB4AO15263 64 aa0.07□□□□□ -2.4
CDC42SE2-210ENST00000506929 TMEM167AQ8TBQ9 72 aa0.07□□□□□ -2.4
CDC42SE2-210ENST00000506929 UNC80Q8N2C7 3258 aa0.07□□□□□ -2.4
CDC42SE2-210ENST00000506929 TGP01266 2768 aa0.06□□□□□ -2.4
CDC42SE2-210ENST00000506929 DMXL2Q8TDJ6 3036 aa0.06□□□□□ -2.4
CDC42SE2-210ENST00000506929 SPTA1P02549 2419 aa0.06□□□□□ -2.4
CDC42SE2-210ENST00000506929 MYO15AQ9UKN7 3530 aa0.06□□□□□ -2.4
CDC42SE2-210ENST00000506929 SPART-AS1P0CW21 52 aa0.06□□□□□ -2.4
CDC42SE2-210ENST00000506929 MT1GP13640 62 aa0.06□□□□□ -2.4
CDC42SE2-210ENST00000506929 HTN3P15516 51 aa0.06□□□□□ -2.4
CDC42SE2-210ENST00000506929 DEFB131AP59861 70 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms