RNA–Protein interactions for RNA: ENST00000506275.1

ITGA1-204, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 7,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-204ENST00000506275 A8MUU9 505 aa1.47□□□□□ -2.17
ITGA1-204ENST00000506275 ABCA13Q86UQ4 5058 aa1.47□□□□□ -2.17
ITGA1-204ENST00000506275 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
ITGA1-204ENST00000506275 VPS13CQ709C8 3753 aa1.47□□□□□ -2.17
ITGA1-204ENST00000506275 LCE2CQ5TA81 110 aa1.47□□□□□ -2.17
ITGA1-204ENST00000506275 KRTAP4-12Q9BQ66 201 aa1.46□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP4-7Q9BYR0 210 aa1.46□□□□□ -2.18
ITGA1-204ENST00000506275 GPR98Q8WXG9 6306 aa1.46□□□□□ -2.18
ITGA1-204ENST00000506275 C10orf95Q9H7T3 257 aa1.46□□□□□ -2.18
ITGA1-204ENST00000506275 LCE6AA0A183 80 aa1.46□□□□□ -2.18
ITGA1-204ENST00000506275 PKHD1L1Q86WI1 4243 aa1.45□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP16-1A8MUX0 517 aa1.45□□□□□ -2.18
ITGA1-204ENST00000506275 DNAH17Q9UFH2 4485 aa1.45□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP23-1A1A580 65 aa1.45□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP10-8P60410 259 aa1.44□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP9-9Q9BYP9 154 aa1.44□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP9-4Q9BYQ2 154 aa1.44□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP9-6A0A140TA67 174 aa1.44□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP9-8Q9BYQ0 159 aa1.44□□□□□ -2.18
ITGA1-204ENST00000506275 UBR4Q5T4S7 5183 aa1.43□□□□□ -2.18
ITGA1-204ENST00000506275 XP32Q5T750 250 aa1.43□□□□□ -2.18
ITGA1-204ENST00000506275 PKHD1P08F94 4074 aa1.43□□□□□ -2.18
ITGA1-204ENST00000506275 HECTD4Q9Y4D8 3996 aa1.43□□□□□ -2.18
ITGA1-204ENST00000506275 LORP23490 312 aaPredicted RBP1.43□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP4-16G5E9R7 235 aaPredicted RBP1.42□□□□□ -2.18
ITGA1-204ENST00000506275 SPRR1BP22528 89 aa1.42□□□□□ -2.18
ITGA1-204ENST00000506275 VPS13BQ7Z7G8 4022 aa1.42□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP29-1A8MX34 341 aaPredicted RBP1.42□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP13-2Q52LG2 175 aa1.42□□□□□ -2.18
ITGA1-204ENST00000506275 KIAA1109Q2LD37 5005 aa1.41□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP7-1Q8IUC3 87 aa1.41□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP25-1Q3LHN0 102 aa1.41□□□□□ -2.18
ITGA1-204ENST00000506275 TNP1P09430 55 aa1.4□□□□□ -2.18
ITGA1-204ENST00000506275 PRKDCP78527 4128 aaKnown RBP1.39□□□□□ -2.19
ITGA1-204ENST00000506275 KRTAP10-10P60014 251 aa1.39□□□□□ -2.19
ITGA1-204ENST00000506275 Q6ZRN7 208 aaPredicted RBP1.38□□□□□ -2.19
ITGA1-204ENST00000506275 ASB16-AS1Q495Z4 193 aa1.38□□□□□ -2.19
ITGA1-204ENST00000506275 A6NN06 94 aa1.37□□□□□ -2.19
ITGA1-204ENST00000506275 FRAS1Q86XX4 4008 aa1.36□□□□□ -2.19
ITGA1-204ENST00000506275 VPS13DQ5THJ4 4388 aa1.36□□□□□ -2.19
ITGA1-204ENST00000506275 KRTAP4-9Q9BYQ8 210 aa1.36□□□□□ -2.19
ITGA1-204ENST00000506275 TNXBP22105 4242 aa1.36□□□□□ -2.19
ITGA1-204ENST00000506275 P0C880 135 aa1.36□□□□□ -2.19
ITGA1-204ENST00000506275 H0YAA0 97 aa1.34□□□□□ -2.19
ITGA1-204ENST00000506275 HERC1Q15751 4861 aa1.34□□□□□ -2.19
ITGA1-204ENST00000506275 RNF213Q63HN8 5207 aa1.34□□□□□ -2.2
ITGA1-204ENST00000506275 DNAH2Q9P225 4427 aa1.34□□□□□ -2.2
ITGA1-204ENST00000506275 KRTAP15-1Q3LI76 137 aa1.33□□□□□ -2.2
ITGA1-204ENST00000506275 KRTAP13-1Q8IUC0 172 aa1.33□□□□□ -2.2
ITGA1-204ENST00000506275 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
ITGA1-204ENST00000506275 SACSQ9NZJ4 4579 aa1.33□□□□□ -2.2
ITGA1-204ENST00000506275 HSPG2P98160 4391 aa1.33□□□□□ -2.2
ITGA1-204ENST00000506275 DNAH11Q96DT5 4516 aa1.32□□□□□ -2.2
ITGA1-204ENST00000506275 HERC2O95714 4834 aa1.32□□□□□ -2.2
ITGA1-204ENST00000506275 FAT2Q9NYQ8 4349 aa1.32□□□□□ -2.2
ITGA1-204ENST00000506275 KRTAP1-4P0C5Y4 121 aa1.31□□□□□ -2.2
ITGA1-204ENST00000506275 CRCT1Q9UGL9 99 aa1.31□□□□□ -2.2
ITGA1-204ENST00000506275 KRTAP5-9P26371 169 aa1.3□□□□□ -2.2
ITGA1-204ENST00000506275 HMCN2Q8NDA2 5059 aa1.3□□□□□ -2.2
ITGA1-204ENST00000506275 PKD1P98161 4303 aa1.29□□□□□ -2.2
ITGA1-204ENST00000506275 RPS29P62273 56 aaKnown RBP1.29□□□□□ -2.2
ITGA1-204ENST00000506275 FAT4Q6V0I7 4981 aa1.29□□□□□ -2.2
ITGA1-204ENST00000506275 PRO2289Q9P1D8 64 aa1.28□□□□□ -2.2
ITGA1-204ENST00000506275 KRTAP12-2P59991 146 aa1.28□□□□□ -2.2
ITGA1-204ENST00000506275 PP632Q6XCG6 107 aa1.27□□□□□ -2.21
ITGA1-204ENST00000506275 DNAH9Q9NYC9 4486 aa1.27□□□□□ -2.21
ITGA1-204ENST00000506275 MUC2Q02817 5179 aa1.26□□□□□ -2.21
ITGA1-204ENST00000506275 TPRXLQ17RH7 258 aa1.26□□□□□ -2.21
ITGA1-204ENST00000506275 KRTAP13-3Q3SY46 172 aa1.26□□□□□ -2.21
ITGA1-204ENST00000506275 OBSCNQ5VST9 7968 aa1.26□□□□□ -2.21
ITGA1-204ENST00000506275 FLGP20930 4061 aaPredicted RBP1.26□□□□□ -2.21
ITGA1-204ENST00000506275 LRP2P98164 4655 aa1.25□□□□□ -2.21
ITGA1-204ENST00000506275 DYNC1H1Q14204 4646 aaKnown RBP1.25□□□□□ -2.21
ITGA1-204ENST00000506275 KRTAP3-1Q9BYR8 98 aa1.24□□□□□ -2.21
ITGA1-204ENST00000506275 KRTAP12-1P59990 96 aa1.23□□□□□ -2.21
ITGA1-204ENST00000506275 KRTAP4-11Q9BYQ6 195 aa1.23□□□□□ -2.21
ITGA1-204ENST00000506275 FCGBPQ9Y6R7 5405 aaPredicted RBP1.22□□□□□ -2.21
ITGA1-204ENST00000506275 LRP1BQ9NZR2 4599 aa1.22□□□□□ -2.21
ITGA1-204ENST00000506275 KRTAP19-1Q8IUB9 90 aa1.22□□□□□ -2.21
ITGA1-204ENST00000506275 LCE1DQ5T752 114 aa1.21□□□□□ -2.22
ITGA1-204ENST00000506275 STARD9Q9P2P6 4700 aa1.21□□□□□ -2.22
ITGA1-204ENST00000506275 KRTAP13-4Q3LI77 160 aa1.21□□□□□ -2.22
ITGA1-204ENST00000506275 KRTAP19-4Q3LI73 84 aa1.2□□□□□ -2.22
ITGA1-204ENST00000506275 DNAH8Q96JB1 4490 aa1.19□□□□□ -2.22
ITGA1-204ENST00000506275 LRP1Q07954 4544 aaKnown RBP1.17□□□□□ -2.22
ITGA1-204ENST00000506275 KRTAP5-4Q6L8H1 288 aa1.17□□□□□ -2.22
ITGA1-204ENST00000506275 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
ITGA1-204ENST00000506275 MUC12Q9UKN1 5478 aa1.17□□□□□ -2.22
ITGA1-204ENST00000506275 PLECQ15149 4684 aaKnown RBP1.17□□□□□ -2.22
ITGA1-204ENST00000506275 KRTAP10-6P60371 365 aaPredicted RBP1.16□□□□□ -2.22
ITGA1-204ENST00000506275 LCE3BQ5TA77 95 aa1.15□□□□□ -2.22
ITGA1-204ENST00000506275 KRTAP10-5P60370 271 aa1.14□□□□□ -2.23
ITGA1-204ENST00000506275 MDN1Q9NU22 5596 aa1.14□□□□□ -2.23
ITGA1-204ENST00000506275 KRTAP10-12P60413 245 aa1.14□□□□□ -2.23
ITGA1-204ENST00000506275 LCE4AQ5TA78 99 aa1.14□□□□□ -2.23
ITGA1-204ENST00000506275 FAT1Q14517 4588 aa1.13□□□□□ -2.23
ITGA1-204ENST00000506275 MYCBP2O75592 4640 aa1.13□□□□□ -2.23
ITGA1-204ENST00000506275 DNAH10Q8IVF4 4471 aa1.12□□□□□ -2.23
ITGA1-204ENST00000506275 DNAH5Q8TE73 4624 aa1.12□□□□□ -2.23
ITGA1-204ENST00000506275 MT1HL1P0DM35 61 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 209.2 ms