RNA–Protein interactions for RNA: ENST00000506275.1

ITGA1-204, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 7,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-204ENST00000506275 DCAF8L2P0C7V8 631 aa4.56□□□□□ -1.68
ITGA1-204ENST00000506275 EHMT2Q96KQ7 1210 aa4.39□□□□□ -1.71
ITGA1-204ENST00000506275 SUPT5HO00267 1087 aaKnown RBP4.26□□□□□ -1.73
ITGA1-204ENST00000506275 TTBK1Q5TCY1 1321 aaPredicted RBP4.21□□□□□ -1.74
ITGA1-204ENST00000506275 SHROOM4Q9ULL8 1493 aa4.14□□□□□ -1.75
ITGA1-204ENST00000506275 CHIC1Q5VXU3 224 aa4.11□□□□□ -1.75
ITGA1-204ENST00000506275 RANGAP1P46060 587 aaPredicted RBP4.11□□□□□ -1.75
ITGA1-204ENST00000506275 FAM9AQ8IZU1 332 aaPredicted RBP4.09□□□□□ -1.75
ITGA1-204ENST00000506275 AEBP2Q6ZN18 517 aaPredicted RBP4.06□□□□□ -1.76
ITGA1-204ENST00000506275 PCGF6Q9BYE7 350 aa4.05□□□□□ -1.76
ITGA1-204ENST00000506275 MYT1Q01538 1121 aa4.02□□□□□ -1.77
ITGA1-204ENST00000506275 ATP1B4Q9UN42 357 aaPredicted RBP4.02□□□□□ -1.77
ITGA1-204ENST00000506275 PELP1Q8IZL8 1130 aaKnown RBP4□□□□□ -1.77
ITGA1-204ENST00000506275 CNGB1Q14028 1251 aaPredicted RBP3.99□□□□□ -1.77
ITGA1-204ENST00000506275 PPARGC1BQ86YN6 1023 aaKnown RBP3.99□□□□□ -1.77
ITGA1-204ENST00000506275 YTHDC1Q96MU7 727 aaKnown RBP3.99□□□□□ -1.77
ITGA1-204ENST00000506275 APLP2Q06481 763 aa3.99□□□□□ -1.77
ITGA1-204ENST00000506275 ERICH6Q7L0X2 663 aa3.99□□□□□ -1.77
ITGA1-204ENST00000506275 CCER1Q8TC90 406 aaPredicted RBP3.92□□□□□ -1.78
ITGA1-204ENST00000506275 POLR3GLQ9BT43 218 aa3.91□□□□□ -1.78
ITGA1-204ENST00000506275 ITGAEP38570 1179 aa3.88□□□□□ -1.79
ITGA1-204ENST00000506275 MYT1LQ9UL68 1186 aa3.86□□□□□ -1.79
ITGA1-204ENST00000506275 UBTFP17480 764 aaKnown RBP3.86□□□□□ -1.79
ITGA1-204ENST00000506275 CENPBP07199 599 aaPredicted RBP3.85□□□□□ -1.79
ITGA1-204ENST00000506275 BCL11AQ9H165 835 aa3.85□□□□□ -1.79
ITGA1-204ENST00000506275 NEFLP07196 543 aa3.83□□□□□ -1.8
ITGA1-204ENST00000506275 SLC4A1APQ9BWU0 796 aaKnown RBP3.83□□□□□ -1.8
ITGA1-204ENST00000506275 TRIM41Q8WV44 630 aa3.81□□□□□ -1.8
ITGA1-204ENST00000506275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.81□□□□□ -1.8
ITGA1-204ENST00000506275 HNRNPUL2Q1KMD3 747 aaKnown RBP3.81□□□□□ -1.8
ITGA1-204ENST00000506275 DAXXQ9UER7 740 aaPredicted RBP3.79□□□□□ -1.8
ITGA1-204ENST00000506275 LOC105371045A0A1W2PR82 267 aa3.76□□□□□ -1.81
ITGA1-204ENST00000506275 CLSPNQ9HAW4 1339 aa3.75□□□□□ -1.81
ITGA1-204ENST00000506275 SLC24A1O60721 1099 aa3.75□□□□□ -1.81
ITGA1-204ENST00000506275 BCANQ96GW7 911 aa3.75□□□□□ -1.81
ITGA1-204ENST00000506275 HRCP23327 699 aa3.7□□□□□ -1.82
ITGA1-204ENST00000506275 PLPPR3Q6T4P5 718 aa3.7□□□□□ -1.82
ITGA1-204ENST00000506275 ZEB1P37275 1124 aaPredicted RBP3.7□□□□□ -1.82
ITGA1-204ENST00000506275 ZNF316A6NFI3 1004 aaPredicted RBP3.69□□□□□ -1.82
ITGA1-204ENST00000506275 ZNF326Q5BKZ1 582 aaKnown RBP3.69□□□□□ -1.82
ITGA1-204ENST00000506275 NEUROD1Q13562 356 aa3.69□□□□□ -1.82
ITGA1-204ENST00000506275 RTL5Q5HYW3 569 aaPredicted RBP3.67□□□□□ -1.82
ITGA1-204ENST00000506275 SENP3Q9H4L4 574 aaPredicted RBP3.67□□□□□ -1.82
ITGA1-204ENST00000506275 ARID3CA6NKF2 412 aa3.66□□□□□ -1.82
ITGA1-204ENST00000506275 PLEKHG5O94827 1062 aa3.66□□□□□ -1.82
ITGA1-204ENST00000506275 FAM50AQ14320 339 aaKnown RBP3.65□□□□□ -1.82
ITGA1-204ENST00000506275 ARXQ96QS3 562 aa3.65□□□□□ -1.83
ITGA1-204ENST00000506275 TRIM26Q12899 539 aaPredicted RBP3.64□□□□□ -1.83
ITGA1-204ENST00000506275 EIF5BO60841 1220 aaKnown RBP3.64□□□□□ -1.83
ITGA1-204ENST00000506275 DIEXFQ68CQ4 756 aaKnown RBP3.64□□□□□ -1.83
ITGA1-204ENST00000506275 TRIM52Q96A61 297 aa3.64□□□□□ -1.83
ITGA1-204ENST00000506275 NPM2Q86SE8 214 aaKnown RBP3.64□□□□□ -1.83
ITGA1-204ENST00000506275 SALL2Q9Y467 1007 aaPredicted RBP3.64□□□□□ -1.83
ITGA1-204ENST00000506275 PHF23Q9BUL5 403 aaPredicted RBP3.63□□□□□ -1.83
ITGA1-204ENST00000506275 POTEDQ86YR6 584 aa3.63□□□□□ -1.83
ITGA1-204ENST00000506275 GTF3C3Q9Y5Q9 886 aa3.62□□□□□ -1.83
ITGA1-204ENST00000506275 FBLN2P98095 1184 aa3.62□□□□□ -1.83
ITGA1-204ENST00000506275 SENP3-EIF4A1A0A087X0R7 540 aa3.62□□□□□ -1.83
ITGA1-204ENST00000506275 NISCHQ9Y2I1 1504 aa3.62□□□□□ -1.83
ITGA1-204ENST00000506275 A0A0G2JS52 829 aa3.6□□□□□ -1.83
ITGA1-204ENST00000506275 ZBTB47Q9UFB7 747 aaPredicted RBP3.59□□□□□ -1.83
ITGA1-204ENST00000506275 P3H3Q8IVL6 736 aa3.59□□□□□ -1.83
ITGA1-204ENST00000506275 CANXP27824 592 aaKnown RBP3.59□□□□□ -1.83
ITGA1-204ENST00000506275 NBR1Q14596 966 aa3.57□□□□□ -1.84
ITGA1-204ENST00000506275 TULP1O00294 542 aaPredicted RBP3.56□□□□□ -1.84
ITGA1-204ENST00000506275 TPRNQ4KMQ1 711 aa3.56□□□□□ -1.84
ITGA1-204ENST00000506275 SCAF1Q9H7N4 1312 aaKnown RBP3.56□□□□□ -1.84
ITGA1-204ENST00000506275 CDK11AQ9UQ88 783 aaPredicted RBP3.56□□□□□ -1.84
ITGA1-204ENST00000506275 CHGAP10645 457 aaKnown RBP3.56□□□□□ -1.84
ITGA1-204ENST00000506275 PABPN1Q86U42 306 aaKnown RBP eCLIP3.55□□□□□ -1.84
ITGA1-204ENST00000506275 ZNF777Q9ULD5 760 aaPredicted RBP3.55□□□□□ -1.84
ITGA1-204ENST00000506275 IRX6P78412 446 aaPredicted RBP3.55□□□□□ -1.84
ITGA1-204ENST00000506275 HIRIP3Q9BW71 556 aaPredicted RBP3.55□□□□□ -1.84
ITGA1-204ENST00000506275 TAOK2Q9UL54 1235 aa3.55□□□□□ -1.84
ITGA1-204ENST00000506275 ANP32CO43423 234 aa3.54□□□□□ -1.84
ITGA1-204ENST00000506275 HSP90AA1P07900 732 aaKnown RBP3.54□□□□□ -1.84
ITGA1-204ENST00000506275 NCBP3Q53F19 620 aaKnown RBP3.54□□□□□ -1.84
ITGA1-204ENST00000506275 DCAF8L1A6NGE4 600 aa3.53□□□□□ -1.84
ITGA1-204ENST00000506275 KCNA4P22459 653 aa3.53□□□□□ -1.84
ITGA1-204ENST00000506275 FAM9BQ8IZU0 186 aa3.53□□□□□ -1.84
ITGA1-204ENST00000506275 AMER1Q5JTC6 1135 aaPredicted RBP3.53□□□□□ -1.84
ITGA1-204ENST00000506275 ADRA2BP18089 450 aa3.53□□□□□ -1.84
ITGA1-204ENST00000506275 ZBTB7CA1YPR0 619 aa3.52□□□□□ -1.85
ITGA1-204ENST00000506275 FKBP8Q14318 412 aa3.52□□□□□ -1.85
ITGA1-204ENST00000506275 NEFMP07197 916 aa3.51□□□□□ -1.85
ITGA1-204ENST00000506275 DDX10Q13206 875 aaKnown RBP3.5□□□□□ -1.85
ITGA1-204ENST00000506275 ANP32AP39687 249 aaKnown RBP3.5□□□□□ -1.85
ITGA1-204ENST00000506275 STAG3Q9UJ98 1225 aa3.5□□□□□ -1.85
ITGA1-204ENST00000506275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.5□□□□□ -1.852e-6■□□□□ 8.5
ITGA1-204ENST00000506275 HNRNPUQ00839 825 aaKnown RBP eCLIP3.49□□□□□ -1.85
ITGA1-204ENST00000506275 KDM2AQ9Y2K7 1162 aa3.49□□□□□ -1.85
ITGA1-204ENST00000506275 RTN4Q9NQC3 1192 aaKnown RBP3.49□□□□□ -1.85
ITGA1-204ENST00000506275 C14orf37Q86TY3 774 aa3.48□□□□□ -1.85
ITGA1-204ENST00000506275 CHIC2Q9UKJ5 165 aa3.48□□□□□ -1.85
ITGA1-204ENST00000506275 ESF1Q9H501 851 aaKnown RBP3.47□□□□□ -1.85
ITGA1-204ENST00000506275 ANP32BQ92688 251 aaKnown RBP3.47□□□□□ -1.85
ITGA1-204ENST00000506275 ARID4BQ4LE39 1312 aaPredicted RBP3.45□□□□□ -1.86
ITGA1-204ENST00000506275 PPM1GO15355 546 aaPredicted RBP3.45□□□□□ -1.86
ITGA1-204ENST00000506275 CCDC136Q96JN2 1154 aa3.45□□□□□ -1.86
ITGA1-204ENST00000506275 ACIN1Q9UKV3 1341 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms