RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 LAMA5O15230 3695 aa0.37□□□□□ -2.35
SMARCAD1-205ENST00000506089 ITSN2Q9NZM3 1697 aa0.37□□□□□ -2.35
SMARCAD1-205ENST00000506089 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
SMARCAD1-205ENST00000506089 HECTD4Q9Y4D8 3996 aa0.36□□□□□ -2.35
SMARCAD1-205ENST00000506089 EEA1Q15075 1411 aa0.36□□□□□ -2.35
SMARCAD1-205ENST00000506089 CROCC2H7BZ55 1655 aa0.35□□□□□ -2.35
SMARCAD1-205ENST00000506089 NMES1Q9C002 83 aa0.35□□□□□ -2.35
SMARCAD1-205ENST00000506089 PRXQ9BXM0 1461 aa0.35□□□□□ -2.35
SMARCAD1-205ENST00000506089 DNAH7Q8WXX0 4024 aa0.34□□□□□ -2.35
SMARCAD1-205ENST00000506089 MYCBP2O75592 4640 aa0.34□□□□□ -2.35
SMARCAD1-205ENST00000506089 USH2AO75445 5202 aa0.34□□□□□ -2.35
SMARCAD1-205ENST00000506089 MINOS1Q5TGZ0 78 aa0.34□□□□□ -2.36
SMARCAD1-205ENST00000506089 SPRR2EP22531 72 aa0.33□□□□□ -2.36
SMARCAD1-205ENST00000506089 SPRR2BP35325 72 aa0.33□□□□□ -2.36
SMARCAD1-205ENST00000506089 SPRR2AP35326 72 aa0.33□□□□□ -2.36
SMARCAD1-205ENST00000506089 PREX2Q70Z35 1606 aa0.33□□□□□ -2.36
SMARCAD1-205ENST00000506089 PRKDCP78527 4128 aaKnown RBP0.33□□□□□ -2.36
SMARCAD1-205ENST00000506089 SMR3BP02814 79 aaPredicted RBP0.32□□□□□ -2.36
SMARCAD1-205ENST00000506089 MT4P47944 62 aa0.32□□□□□ -2.36
SMARCAD1-205ENST00000506089 KRTAP19-6Q3LI70 58 aa0.32□□□□□ -2.36
SMARCAD1-205ENST00000506089 AKAP9Q99996 3911 aa0.32□□□□□ -2.36
SMARCAD1-205ENST00000506089 LYSTQ99698 3801 aa0.31□□□□□ -2.36
SMARCAD1-205ENST00000506089 M0R1W7 72 aa0.31□□□□□ -2.36
SMARCAD1-205ENST00000506089 FCER1GP30273 86 aa0.31□□□□□ -2.36
SMARCAD1-205ENST00000506089 ANKRD36CQ5JPF3 1778 aa0.31□□□□□ -2.36
SMARCAD1-205ENST00000506089 UGGT1Q9NYU2 1555 aa0.31□□□□□ -2.36
SMARCAD1-205ENST00000506089 CDC42BPAQ5VT25 1732 aa0.3□□□□□ -2.36
SMARCAD1-205ENST00000506089 TRRAPQ9Y4A5 3859 aa0.3□□□□□ -2.36
SMARCAD1-205ENST00000506089 SYCP2Q9BX26 1530 aa0.29□□□□□ -2.36
SMARCAD1-205ENST00000506089 LPAP08519 4548 aa0.29□□□□□ -2.36
SMARCAD1-205ENST00000506089 C6orf48Q9UBA6 75 aa0.29□□□□□ -2.36
SMARCAD1-205ENST00000506089 TOGARAM1Q9Y4F4 1720 aa0.28□□□□□ -2.36
SMARCAD1-205ENST00000506089 PRLHP81277 87 aa0.28□□□□□ -2.36
SMARCAD1-205ENST00000506089 PKHD1P08F94 4074 aa0.28□□□□□ -2.36
SMARCAD1-205ENST00000506089 ALMS1Q8TCU4 4167 aa0.28□□□□□ -2.36
SMARCAD1-205ENST00000506089 MROH2AA6NES4 1674 aa0.27□□□□□ -2.37
SMARCAD1-205ENST00000506089 RPS27P42677 84 aaKnown RBP0.27□□□□□ -2.37
SMARCAD1-205ENST00000506089 WT1-ASQ06250 92 aa0.27□□□□□ -2.37
SMARCAD1-205ENST00000506089 RPS27LQ71UM5 84 aaKnown RBP0.27□□□□□ -2.37
SMARCAD1-205ENST00000506089 ADCY10Q96PN6 1610 aa0.27□□□□□ -2.37
SMARCAD1-205ENST00000506089 FAT3Q8TDW7 4589 aa0.26□□□□□ -2.37
SMARCAD1-205ENST00000506089 PKD1P98161 4303 aa0.25□□□□□ -2.37
SMARCAD1-205ENST00000506089 IGIPA6NJ69 53 aa0.25□□□□□ -2.37
SMARCAD1-205ENST00000506089 S4R3F8 94 aa0.25□□□□□ -2.37
SMARCAD1-205ENST00000506089 DEFB106AQ8N104 65 aa0.24□□□□□ -2.37
SMARCAD1-205ENST00000506089 CMYA5Q8N3K9 4069 aa0.23□□□□□ -2.37
SMARCAD1-205ENST00000506089 LRP1BQ9NZR2 4599 aa0.23□□□□□ -2.37
SMARCAD1-205ENST00000506089 HSPG2P98160 4391 aa0.23□□□□□ -2.37
SMARCAD1-205ENST00000506089 DYNC1H1Q14204 4646 aaKnown RBP0.23□□□□□ -2.37
SMARCAD1-205ENST00000506089 DEFB124Q8NES8 71 aa0.22□□□□□ -2.37
SMARCAD1-205ENST00000506089 SPRR2FQ96RM1 72 aa0.22□□□□□ -2.37
SMARCAD1-205ENST00000506089 TMEM167BQ9NRX6 74 aa0.22□□□□□ -2.37
SMARCAD1-205ENST00000506089 LRP2P98164 4655 aa0.22□□□□□ -2.37
SMARCAD1-205ENST00000506089 H3BUA1 57 aa0.21□□□□□ -2.38
SMARCAD1-205ENST00000506089 DNAH9Q9NYC9 4486 aa0.21□□□□□ -2.38
SMARCAD1-205ENST00000506089 DNAH1Q9P2D7 4330 aa0.2□□□□□ -2.38
SMARCAD1-205ENST00000506089 C9orf92A6NGG3 77 aa0.2□□□□□ -2.38
SMARCAD1-205ENST00000506089 IQGAP1P46940 1657 aa0.2□□□□□ -2.38
SMARCAD1-205ENST00000506089 STARD9Q9P2P6 4700 aa0.19□□□□□ -2.38
SMARCAD1-205ENST00000506089 VPS13BQ7Z7G8 4022 aa0.19□□□□□ -2.38
SMARCAD1-205ENST00000506089 DEFB104AQ8WTQ1 72 aa0.19□□□□□ -2.38
SMARCAD1-205ENST00000506089 TIMM8BQ9Y5J9 83 aaPredicted RBP0.19□□□□□ -2.38
SMARCAD1-205ENST00000506089 MROH2BQ7Z745 1585 aa0.19□□□□□ -2.38
SMARCAD1-205ENST00000506089 ABCA5Q8WWZ7 1642 aa0.18□□□□□ -2.38
SMARCAD1-205ENST00000506089 NRXN3Q9Y4C0 1643 aa0.18□□□□□ -2.38
SMARCAD1-205ENST00000506089 H0YGX0 51 aa0.18□□□□□ -2.38
SMARCAD1-205ENST00000506089 A0A1B0GUL6 1792 aa0.17□□□□□ -2.38
SMARCAD1-205ENST00000506089 SACSQ9NZJ4 4579 aa0.17□□□□□ -2.38
SMARCAD1-205ENST00000506089 DNAH6Q9C0G6 4158 aa0.16□□□□□ -2.38
SMARCAD1-205ENST00000506089 CLTCL1P53675 1640 aa0.16□□□□□ -2.38
SMARCAD1-205ENST00000506089 ANK3Q12955 4377 aaKnown RBP0.16□□□□□ -2.38
SMARCAD1-205ENST00000506089 SPRR2GQ9BYE4 73 aa0.16□□□□□ -2.38
SMARCAD1-205ENST00000506089 FANCD2Q9BXW9 1451 aa0.16□□□□□ -2.38
SMARCAD1-205ENST00000506089 NFAT5O94916 1531 aa0.15□□□□□ -2.39
SMARCAD1-205ENST00000506089 AGLP35573 1532 aa0.15□□□□□ -2.39
SMARCAD1-205ENST00000506089 DYNC2H1Q8NCM8 4307 aaKnown RBP0.15□□□□□ -2.39
SMARCAD1-205ENST00000506089 LINC00308Q8TCZ7 52 aa0.15□□□□□ -2.39
SMARCAD1-205ENST00000506089 PKHD1L1Q86WI1 4243 aa0.15□□□□□ -2.39
SMARCAD1-205ENST00000506089 H3BNG1 76 aa0.14□□□□□ -2.39
SMARCAD1-205ENST00000506089 PLNP26678 52 aa0.14□□□□□ -2.39
SMARCAD1-205ENST00000506089 DNAH10Q8IVF4 4471 aa0.14□□□□□ -2.39
SMARCAD1-205ENST00000506089 ABCC8Q09428 1581 aa0.14□□□□□ -2.39
SMARCAD1-205ENST00000506089 DNAH3Q8TD57 4116 aa0.14□□□□□ -2.39
SMARCAD1-205ENST00000506089 DDX60Q8IY21 1712 aaKnown RBP0.13□□□□□ -2.39
SMARCAD1-205ENST00000506089 DNAH5Q8TE73 4624 aa0.13□□□□□ -2.39
SMARCAD1-205ENST00000506089 FLGP20930 4061 aaPredicted RBP0.13□□□□□ -2.39
SMARCAD1-205ENST00000506089 LMO7Q8WWI1 1683 aa0.12□□□□□ -2.39
SMARCAD1-205ENST00000506089 NOP10Q9NPE3 64 aaKnown RBP0.12□□□□□ -2.39
SMARCAD1-205ENST00000506089 APOBP04114 4563 aaKnown RBP0.12□□□□□ -2.39
SMARCAD1-205ENST00000506089 PLECQ15149 4684 aaKnown RBP0.12□□□□□ -2.39
SMARCAD1-205ENST00000506089 DNAH17Q9UFH2 4485 aa0.11□□□□□ -2.39
SMARCAD1-205ENST00000506089 KRTAP20-2Q3LI61 65 aa0.11□□□□□ -2.39
SMARCAD1-205ENST00000506089 SAMD9LQ8IVG5 1584 aa0.11□□□□□ -2.39
SMARCAD1-205ENST00000506089 FAT1Q14517 4588 aa0.1□□□□□ -2.39
SMARCAD1-205ENST00000506089 KRTAP8-1Q8IUC2 63 aa0.1□□□□□ -2.39
SMARCAD1-205ENST00000506089 CMC2Q9NRP2 79 aa0.1□□□□□ -2.39
SMARCAD1-205ENST00000506089 ABRACLQ9P1F3 81 aa0.1□□□□□ -2.39
SMARCAD1-205ENST00000506089 KRTAP6-2Q3LI66 62 aa0.09□□□□□ -2.4
SMARCAD1-205ENST00000506089 IGLV5-48A0A075B6I7 105 aa0.08□□□□□ -2.4
SMARCAD1-205ENST00000506089 MUC17Q685J3 4493 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms