RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
SMARCAD1-205ENST00000506089 CHIC1Q5VXU3 224 aa22.84■■□□□ 1.25
SMARCAD1-205ENST00000506089 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
SMARCAD1-205ENST00000506089 PHF23Q9BUL5 403 aaPredicted RBP20.61■□□□□ 0.89
SMARCAD1-205ENST00000506089 FOXD1Q16676 465 aa19.61■□□□□ 0.73
SMARCAD1-205ENST00000506089 POTEDQ86YR6 584 aa18.89■□□□□ 0.61
SMARCAD1-205ENST00000506089 MSH5O43196 834 aa18.46■□□□□ 0.55
SMARCAD1-205ENST00000506089 PIAS4Q8N2W9 510 aaPredicted RBP18.2■□□□□ 0.5
SMARCAD1-205ENST00000506089 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
SMARCAD1-205ENST00000506089 PLPPR3Q6T4P5 718 aa17.96■□□□□ 0.47
SMARCAD1-205ENST00000506089 ADRA2BP18089 450 aa17.91■□□□□ 0.46
SMARCAD1-205ENST00000506089 MAPK8IP2Q13387 824 aaPredicted RBP16.6■□□□□ 0.25
SMARCAD1-205ENST00000506089 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
SMARCAD1-205ENST00000506089 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
SMARCAD1-205ENST00000506089 CACNB1Q02641 598 aaPredicted RBP16.18■□□□□ 0.18
SMARCAD1-205ENST00000506089 DCAF8L1A6NGE4 600 aa15.92■□□□□ 0.14
SMARCAD1-205ENST00000506089 RNF39Q9H2S5 420 aa15.75■□□□□ 0.11
SMARCAD1-205ENST00000506089 HOXD11P31277 338 aaPredicted RBP15.72■□□□□ 0.11
SMARCAD1-205ENST00000506089 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
SMARCAD1-205ENST00000506089 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
SMARCAD1-205ENST00000506089 RNF216Q9NWF9 866 aaPredicted RBP15.47■□□□□ 0.07
SMARCAD1-205ENST00000506089 C1QBPQ07021 282 aaKnown RBP15.45■□□□□ 0.06
SMARCAD1-205ENST00000506089 DNAJC5BQ9UF47 199 aa15.21■□□□□ 0.03
SMARCAD1-205ENST00000506089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
SMARCAD1-205ENST00000506089 NCBP3Q53F19 620 aaKnown RBP14.91□□□□□ -0.02
SMARCAD1-205ENST00000506089 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
SMARCAD1-205ENST00000506089 POTEHQ6S545 545 aa14.7□□□□□ -0.06
SMARCAD1-205ENST00000506089 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
SMARCAD1-205ENST00000506089 SPINK5Q9NQ38 1064 aaPredicted RBP14.61□□□□□ -0.07
SMARCAD1-205ENST00000506089 DSG3P32926 999 aa14.6□□□□□ -0.07
SMARCAD1-205ENST00000506089 CAPN15O75808 1086 aa14.57□□□□□ -0.08
SMARCAD1-205ENST00000506089 TRHP20396 242 aaPredicted RBP14.24□□□□□ -0.13
SMARCAD1-205ENST00000506089 ABCB7O75027 752 aa14.23□□□□□ -0.13
SMARCAD1-205ENST00000506089 SLC4A2P04920 1241 aa14.23□□□□□ -0.13
SMARCAD1-205ENST00000506089 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
SMARCAD1-205ENST00000506089 KCNA4P22459 653 aa14.09□□□□□ -0.15
SMARCAD1-205ENST00000506089 APLP2Q06481 763 aa14.09□□□□□ -0.15
SMARCAD1-205ENST00000506089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.99□□□□□ -0.17
SMARCAD1-205ENST00000506089 HNRNPUL2Q1KMD3 747 aaKnown RBP13.99□□□□□ -0.17
SMARCAD1-205ENST00000506089 SAMD1Q6SPF0 538 aaPredicted RBP13.91□□□□□ -0.18
SMARCAD1-205ENST00000506089 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
SMARCAD1-205ENST00000506089 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
SMARCAD1-205ENST00000506089 POLA2Q14181 598 aa13.74□□□□□ -0.21
SMARCAD1-205ENST00000506089 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
SMARCAD1-205ENST00000506089 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
SMARCAD1-205ENST00000506089 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
SMARCAD1-205ENST00000506089 ATF5Q9Y2D1 282 aaPredicted RBP13.43□□□□□ -0.26
SMARCAD1-205ENST00000506089 PIP4P2Q8N4L2 257 aa13.41□□□□□ -0.26
SMARCAD1-205ENST00000506089 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
SMARCAD1-205ENST00000506089 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
SMARCAD1-205ENST00000506089 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
SMARCAD1-205ENST00000506089 HAX1O00165 279 aa13.28□□□□□ -0.28
SMARCAD1-205ENST00000506089 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
SMARCAD1-205ENST00000506089 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
SMARCAD1-205ENST00000506089 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMARCAD1-205ENST00000506089 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
SMARCAD1-205ENST00000506089 EVX2Q03828 476 aa13.13□□□□□ -0.31
SMARCAD1-205ENST00000506089 ZBTB22O15209 634 aa12.96□□□□□ -0.33
SMARCAD1-205ENST00000506089 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
SMARCAD1-205ENST00000506089 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
SMARCAD1-205ENST00000506089 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
SMARCAD1-205ENST00000506089 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
SMARCAD1-205ENST00000506089 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
SMARCAD1-205ENST00000506089 FBLN2P98095 1184 aa12.85□□□□□ -0.35
SMARCAD1-205ENST00000506089 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
SMARCAD1-205ENST00000506089 C19orf67A6NJJ6 358 aa12.82□□□□□ -0.36
SMARCAD1-205ENST00000506089 SPDYE1Q8NFV5 336 aaPredicted RBP12.82□□□□□ -0.36
SMARCAD1-205ENST00000506089 GABBR2O75899 941 aa12.77□□□□□ -0.37
SMARCAD1-205ENST00000506089 MKRN4PQ13434 485 aaPredicted RBP12.76□□□□□ -0.37
SMARCAD1-205ENST00000506089 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
SMARCAD1-205ENST00000506089 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
SMARCAD1-205ENST00000506089 LHX8Q68G74 356 aa12.7□□□□□ -0.38
SMARCAD1-205ENST00000506089 CHADLQ6NUI6 762 aa12.7□□□□□ -0.38
SMARCAD1-205ENST00000506089 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
SMARCAD1-205ENST00000506089 EHMT2Q96KQ7 1210 aa12.56□□□□□ -0.4
SMARCAD1-205ENST00000506089 PABPN1Q86U42 306 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMARCAD1-205ENST00000506089 CSRNP3Q8WYN3 585 aa12.53□□□□□ -0.4
SMARCAD1-205ENST00000506089 POTEIP0CG38 1075 aa12.52□□□□□ -0.41
SMARCAD1-205ENST00000506089 CD44P16070 742 aaKnown RBP12.48□□□□□ -0.41
SMARCAD1-205ENST00000506089 FARP1Q9Y4F1 1045 aaPredicted RBP12.42□□□□□ -0.42
SMARCAD1-205ENST00000506089 PLSCR2Q9NRY7 297 aa12.33□□□□□ -0.44
SMARCAD1-205ENST00000506089 DCBLD2Q96PD2 775 aa12.3□□□□□ -0.44
SMARCAD1-205ENST00000506089 CLCN6P51797 869 aa12.28□□□□□ -0.44
SMARCAD1-205ENST00000506089 ZNF579Q8NAF0 562 aaKnown RBP12.24□□□□□ -0.45
SMARCAD1-205ENST00000506089 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
SMARCAD1-205ENST00000506089 GALR2O43603 387 aaPredicted RBP12.17□□□□□ -0.46
SMARCAD1-205ENST00000506089 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
SMARCAD1-205ENST00000506089 OTUD5Q96G74 571 aa12.13□□□□□ -0.47
SMARCAD1-205ENST00000506089 POTEB2H3BUK9 544 aa12.1□□□□□ -0.47
SMARCAD1-205ENST00000506089 PHF12Q96QT6 1004 aa12.05□□□□□ -0.48
SMARCAD1-205ENST00000506089 STAG3Q9UJ98 1225 aa12.02□□□□□ -0.49
SMARCAD1-205ENST00000506089 POTEMA6NI47 508 aa12□□□□□ -0.49
SMARCAD1-205ENST00000506089 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
SMARCAD1-205ENST00000506089 PAK3O75914 559 aaPredicted RBP11.98□□□□□ -0.49
SMARCAD1-205ENST00000506089 POTEGQ6S5H5 508 aa11.96□□□□□ -0.49
SMARCAD1-205ENST00000506089 MNX1P50219 401 aaPredicted RBP11.9□□□□□ -0.5
SMARCAD1-205ENST00000506089 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
SMARCAD1-205ENST00000506089 NPM1P06748 294 aaKnown RBP eCLIP11.87□□□□□ -0.51
SMARCAD1-205ENST00000506089 MS4A3Q96HJ5 214 aa11.87□□□□□ -0.51
SMARCAD1-205ENST00000506089 METRNQ9UJH8 293 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 382.3 ms