RNA–Protein interactions for RNA: ENST00000504676.5

CSNK1A1-204, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 1,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-204ENST00000504676 KRTAP10-1P60331 282 aa3.97□□□□□ -1.77
CSNK1A1-204ENST00000504676 SPTSSBQ8NFR3 76 aa3.97□□□□□ -1.77
CSNK1A1-204ENST00000504676 MIR22HGQ0VDD5 57 aa3.97□□□□□ -1.77
CSNK1A1-204ENST00000504676 A8MU10 97 aa3.94□□□□□ -1.78
CSNK1A1-204ENST00000504676 SPINK7P58062 85 aa3.94□□□□□ -1.78
CSNK1A1-204ENST00000504676 KMT2AQ03164 3969 aa3.93□□□□□ -1.78
CSNK1A1-204ENST00000504676 MEGF8Q7Z7M0 2845 aa3.92□□□□□ -1.78
CSNK1A1-204ENST00000504676 A0A1B0GU69 56 aa3.92□□□□□ -1.78
CSNK1A1-204ENST00000504676 KRTAP21-3Q3LHN1 58 aa3.92□□□□□ -1.78
CSNK1A1-204ENST00000504676 SPATA8Q6RVD6 105 aa3.91□□□□□ -1.78
CSNK1A1-204ENST00000504676 ALMS1Q8TCU4 4167 aa3.91□□□□□ -1.78
CSNK1A1-204ENST00000504676 FBN3Q75N90 2809 aa3.91□□□□□ -1.78
CSNK1A1-204ENST00000504676 DNAH11Q96DT5 4516 aa3.91□□□□□ -1.78
CSNK1A1-204ENST00000504676 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
CSNK1A1-204ENST00000504676 FRAS1Q86XX4 4008 aa3.9□□□□□ -1.79
CSNK1A1-204ENST00000504676 LINC00304Q8N9R0 145 aa3.89□□□□□ -1.79
CSNK1A1-204ENST00000504676 DNAH5Q8TE73 4624 aa3.89□□□□□ -1.79
CSNK1A1-204ENST00000504676 TGP01266 2768 aa3.89□□□□□ -1.79
CSNK1A1-204ENST00000504676 UQCR11O14957 56 aa3.89□□□□□ -1.79
CSNK1A1-204ENST00000504676 R4GN34 69 aa3.86□□□□□ -1.79
CSNK1A1-204ENST00000504676 LRP1BQ9NZR2 4599 aa3.86□□□□□ -1.79
CSNK1A1-204ENST00000504676 PKD1P98161 4303 aa3.85□□□□□ -1.79
CSNK1A1-204ENST00000504676 FAT2Q9NYQ8 4349 aa3.83□□□□□ -1.8
CSNK1A1-204ENST00000504676 CSAG1Q6PB30 78 aa3.81□□□□□ -1.8
CSNK1A1-204ENST00000504676 SPINT4Q6UDR6 99 aa3.81□□□□□ -1.8
CSNK1A1-204ENST00000504676 SACSQ9NZJ4 4579 aa3.81□□□□□ -1.8
CSNK1A1-204ENST00000504676 A0A1B0GVY2 172 aa3.79□□□□□ -1.8
CSNK1A1-204ENST00000504676 PRO2289Q9P1D8 64 aa3.79□□□□□ -1.8
CSNK1A1-204ENST00000504676 VPS13BQ7Z7G8 4022 aa3.78□□□□□ -1.8
CSNK1A1-204ENST00000504676 KRTAP10-4P60372 401 aaPredicted RBP3.78□□□□□ -1.8
CSNK1A1-204ENST00000504676 DNHD1Q96M86 4753 aa3.74□□□□□ -1.81
CSNK1A1-204ENST00000504676 COX6B2Q6YFQ2 88 aa3.74□□□□□ -1.81
CSNK1A1-204ENST00000504676 C9orf92A6NGG3 77 aa3.72□□□□□ -1.81
CSNK1A1-204ENST00000504676 SMR3BP02814 79 aaPredicted RBP3.72□□□□□ -1.81
CSNK1A1-204ENST00000504676 PKHD1L1Q86WI1 4243 aa3.71□□□□□ -1.82
CSNK1A1-204ENST00000504676 H1FX-AS1Q4G0G2 97 aa3.7□□□□□ -1.82
CSNK1A1-204ENST00000504676 KRTAP10-8P60410 259 aa3.69□□□□□ -1.82
CSNK1A1-204ENST00000504676 HYDINQ4G0P3 5121 aa3.69□□□□□ -1.82
CSNK1A1-204ENST00000504676 DYNC1H1Q14204 4646 aaKnown RBP3.68□□□□□ -1.82
CSNK1A1-204ENST00000504676 H0YAA0 97 aa3.68□□□□□ -1.82
CSNK1A1-204ENST00000504676 APOBP04114 4563 aaKnown RBP3.68□□□□□ -1.82
CSNK1A1-204ENST00000504676 TPRXLQ17RH7 258 aa3.66□□□□□ -1.82
CSNK1A1-204ENST00000504676 RPL37P61927 97 aaKnown RBP3.65□□□□□ -1.83
CSNK1A1-204ENST00000504676 PKHD1P08F94 4074 aa3.64□□□□□ -1.83
CSNK1A1-204ENST00000504676 FLG2Q5D862 2391 aaPredicted RBP3.61□□□□□ -1.83
CSNK1A1-204ENST00000504676 FAT1Q14517 4588 aa3.59□□□□□ -1.83
CSNK1A1-204ENST00000504676 Q5VSD8 79 aa3.58□□□□□ -1.84
CSNK1A1-204ENST00000504676 KRTAP10-6P60371 365 aaPredicted RBP3.57□□□□□ -1.84
CSNK1A1-204ENST00000504676 S4R3F8 94 aa3.57□□□□□ -1.84
CSNK1A1-204ENST00000504676 FAT3Q8TDW7 4589 aa3.56□□□□□ -1.84
CSNK1A1-204ENST00000504676 KRTAP5-9P26371 169 aa3.55□□□□□ -1.84
CSNK1A1-204ENST00000504676 TNXBP22105 4242 aa3.54□□□□□ -1.84
CSNK1A1-204ENST00000504676 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
CSNK1A1-204ENST00000504676 RYR2Q92736 4967 aa3.51□□□□□ -1.85
CSNK1A1-204ENST00000504676 HSPG2P98160 4391 aa3.51□□□□□ -1.85
CSNK1A1-204ENST00000504676 MT1HL1P0DM35 61 aa3.51□□□□□ -1.85
CSNK1A1-204ENST00000504676 LRP1Q07954 4544 aaKnown RBP3.49□□□□□ -1.85
CSNK1A1-204ENST00000504676 M0QZ58 72 aa3.48□□□□□ -1.85
CSNK1A1-204ENST00000504676 KRTAP13-4Q3LI77 160 aa3.47□□□□□ -1.85
CSNK1A1-204ENST00000504676 DMBT1Q9UGM3 2413 aaPredicted RBP3.43□□□□□ -1.86
CSNK1A1-204ENST00000504676 A0A0D9SG42 100 aa3.43□□□□□ -1.86
CSNK1A1-204ENST00000504676 RYR1P21817 5038 aa3.4□□□□□ -1.86
CSNK1A1-204ENST00000504676 KRTAP12-1P59990 96 aa3.4□□□□□ -1.87
CSNK1A1-204ENST00000504676 CRIPTQ9P021 101 aa3.4□□□□□ -1.87
CSNK1A1-204ENST00000504676 KMT2CQ8NEZ4 4911 aaKnown RBP3.38□□□□□ -1.87
CSNK1A1-204ENST00000504676 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
CSNK1A1-204ENST00000504676 INE1O15225 51 aa3.36□□□□□ -1.87
CSNK1A1-204ENST00000504676 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
CSNK1A1-204ENST00000504676 MYCBP2O75592 4640 aa3.36□□□□□ -1.87
CSNK1A1-204ENST00000504676 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
CSNK1A1-204ENST00000504676 MT3P25713 68 aa3.33□□□□□ -1.88
CSNK1A1-204ENST00000504676 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
CSNK1A1-204ENST00000504676 RYR3Q15413 4870 aa3.3□□□□□ -1.88
CSNK1A1-204ENST00000504676 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
CSNK1A1-204ENST00000504676 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
CSNK1A1-204ENST00000504676 KIAA1109Q2LD37 5005 aa3.26□□□□□ -1.89
CSNK1A1-204ENST00000504676 LRP2P98164 4655 aa3.26□□□□□ -1.89
CSNK1A1-204ENST00000504676 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
CSNK1A1-204ENST00000504676 KRTAP19-2Q3LHN2 52 aa3.22□□□□□ -1.89
CSNK1A1-204ENST00000504676 PP632Q6XCG6 107 aa3.22□□□□□ -1.89
CSNK1A1-204ENST00000504676 LPAP08519 4548 aa3.21□□□□□ -1.89
CSNK1A1-204ENST00000504676 MUC17Q685J3 4493 aa3.2□□□□□ -1.9
CSNK1A1-204ENST00000504676 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
CSNK1A1-204ENST00000504676 KRTAP4-1Q9BYQ7 146 aa3.2□□□□□ -1.9
CSNK1A1-204ENST00000504676 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
CSNK1A1-204ENST00000504676 EPPK1P58107 5090 aaKnown RBP3.13□□□□□ -1.91
CSNK1A1-204ENST00000504676 PLAC4Q8WY50 150 aa3.12□□□□□ -1.91
CSNK1A1-204ENST00000504676 ABCA13Q86UQ4 5058 aa3.1□□□□□ -1.91
CSNK1A1-204ENST00000504676 TNP1P09430 55 aa3.07□□□□□ -1.92
CSNK1A1-204ENST00000504676 FLGP20930 4061 aaPredicted RBP3.07□□□□□ -1.92
CSNK1A1-204ENST00000504676 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
CSNK1A1-204ENST00000504676 BIRC6Q9NR09 4857 aa3.05□□□□□ -1.92
CSNK1A1-204ENST00000504676 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
CSNK1A1-204ENST00000504676 HERC2O95714 4834 aa3.04□□□□□ -1.92
CSNK1A1-204ENST00000504676 SPRR2GQ9BYE4 73 aa3.03□□□□□ -1.92
CSNK1A1-204ENST00000504676 HERC1Q15751 4861 aa3.03□□□□□ -1.92
CSNK1A1-204ENST00000504676 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
CSNK1A1-204ENST00000504676 KRTAP10-12P60413 245 aa2.97□□□□□ -1.93
CSNK1A1-204ENST00000504676 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
CSNK1A1-204ENST00000504676 MT1HP80294 61 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms