RNA–Protein interactions for RNA: ENST00000504676.5

CSNK1A1-204, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 1,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-204ENST00000504676 AEBP2Q6ZN18 517 aaPredicted RBP18.81■□□□□ 0.6
CSNK1A1-204ENST00000504676 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
CSNK1A1-204ENST00000504676 SENP3Q9H4L4 574 aaPredicted RBP16.01■□□□□ 0.15
CSNK1A1-204ENST00000504676 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
CSNK1A1-204ENST00000504676 POTEDQ86YR6 584 aa14.94□□□□□ -0.02
CSNK1A1-204ENST00000504676 FOXD1Q16676 465 aa14.9□□□□□ -0.02
CSNK1A1-204ENST00000504676 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
CSNK1A1-204ENST00000504676 NISCHQ9Y2I1 1504 aa14.47□□□□□ -0.09
CSNK1A1-204ENST00000504676 SLC24A1O60721 1099 aa14.42□□□□□ -0.1
CSNK1A1-204ENST00000504676 PPP6R1Q9UPN7 881 aa14.11□□□□□ -0.15
CSNK1A1-204ENST00000504676 ADRA2BP18089 450 aa14.08□□□□□ -0.16
CSNK1A1-204ENST00000504676 EHMT2Q96KQ7 1210 aa14.06□□□□□ -0.16
CSNK1A1-204ENST00000504676 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
CSNK1A1-204ENST00000504676 MSH5O43196 834 aa13.86□□□□□ -0.19
CSNK1A1-204ENST00000504676 RTN4Q9NQC3 1192 aaKnown RBP13.32□□□□□ -0.28
CSNK1A1-204ENST00000504676 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
CSNK1A1-204ENST00000504676 KCNA4P22459 653 aa13.22□□□□□ -0.29
CSNK1A1-204ENST00000504676 AMER1Q5JTC6 1135 aaPredicted RBP13.13□□□□□ -0.31
CSNK1A1-204ENST00000504676 NCBP3Q53F19 620 aaKnown RBP12.92□□□□□ -0.34
CSNK1A1-204ENST00000504676 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
CSNK1A1-204ENST00000504676 MAPK8IP2Q13387 824 aaPredicted RBP12.87□□□□□ -0.35
CSNK1A1-204ENST00000504676 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
CSNK1A1-204ENST00000504676 SLC4A1APQ9BWU0 796 aaKnown RBP12.74□□□□□ -0.37
CSNK1A1-204ENST00000504676 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
CSNK1A1-204ENST00000504676 DAXXQ9UER7 740 aaPredicted RBP12.72□□□□□ -0.37
CSNK1A1-204ENST00000504676 PRKCSHP14314 528 aaPredicted RBP12.53□□□□□ -0.4
CSNK1A1-204ENST00000504676 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
CSNK1A1-204ENST00000504676 CCDC180Q9P1Z9 1646 aa12.38□□□□□ -0.43
CSNK1A1-204ENST00000504676 HOXD11P31277 338 aaPredicted RBP12.35□□□□□ -0.43
CSNK1A1-204ENST00000504676 RNF216Q9NWF9 866 aaPredicted RBP12.31□□□□□ -0.44
CSNK1A1-204ENST00000504676 ZBTB22O15209 634 aa12.25□□□□□ -0.45
CSNK1A1-204ENST00000504676 ZCCHC6Q5VYS8 1495 aaKnown RBP12.25□□□□□ -0.45
CSNK1A1-204ENST00000504676 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
CSNK1A1-204ENST00000504676 ARXQ96QS3 562 aa12.23□□□□□ -0.45
CSNK1A1-204ENST00000504676 DCAF8L1A6NGE4 600 aa12.2□□□□□ -0.46
CSNK1A1-204ENST00000504676 TIMELESSQ9UNS1 1208 aa12.18□□□□□ -0.46
CSNK1A1-204ENST00000504676 NPM3O75607 178 aaKnown RBP12.17□□□□□ -0.46
CSNK1A1-204ENST00000504676 BCANQ96GW7 911 aa12.17□□□□□ -0.46
CSNK1A1-204ENST00000504676 PLCB2Q00722 1185 aa12.08□□□□□ -0.48
CSNK1A1-204ENST00000504676 DCAF1Q9Y4B6 1507 aa12.04□□□□□ -0.48
CSNK1A1-204ENST00000504676 TPRNQ4KMQ1 711 aa12.02□□□□□ -0.48
CSNK1A1-204ENST00000504676 SHROOM4Q9ULL8 1493 aa12.02□□□□□ -0.49
CSNK1A1-204ENST00000504676 TULP1O00294 542 aaPredicted RBP12.01□□□□□ -0.49
CSNK1A1-204ENST00000504676 HAP1P54257 671 aaPredicted RBP11.92□□□□□ -0.5
CSNK1A1-204ENST00000504676 DNAJC5BQ9UF47 199 aa11.88□□□□□ -0.51
CSNK1A1-204ENST00000504676 SUPT5HO00267 1087 aaKnown RBP11.87□□□□□ -0.51
CSNK1A1-204ENST00000504676 HOMEZQ8IX15 550 aa11.85□□□□□ -0.51
CSNK1A1-204ENST00000504676 FKBP8Q14318 412 aa11.84□□□□□ -0.51
CSNK1A1-204ENST00000504676 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
CSNK1A1-204ENST00000504676 CACNB1Q02641 598 aaPredicted RBP11.78□□□□□ -0.52
CSNK1A1-204ENST00000504676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.78□□□□□ -0.521e-7■■□□□ 14.4
CSNK1A1-204ENST00000504676 GTF3C3Q9Y5Q9 886 aa11.75□□□□□ -0.53
CSNK1A1-204ENST00000504676 MYO15BQ96JP2 1530 aa11.74□□□□□ -0.53
CSNK1A1-204ENST00000504676 VSIG10Q8N0Z9 540 aa11.72□□□□□ -0.53
CSNK1A1-204ENST00000504676 DCAF8L2P0C7V8 631 aa11.71□□□□□ -0.54
CSNK1A1-204ENST00000504676 C1QBPQ07021 282 aaKnown RBP11.69□□□□□ -0.54
CSNK1A1-204ENST00000504676 RANGAP1P46060 587 aaPredicted RBP11.67□□□□□ -0.54
CSNK1A1-204ENST00000504676 FOXD4L1Q9NU39 408 aa11.65□□□□□ -0.54
CSNK1A1-204ENST00000504676 ERICH6Q7L0X2 663 aa11.6□□□□□ -0.55
CSNK1A1-204ENST00000504676 SLC4A2P04920 1241 aa11.57□□□□□ -0.56
CSNK1A1-204ENST00000504676 KDM2AQ9Y2K7 1162 aa11.55□□□□□ -0.56
CSNK1A1-204ENST00000504676 U3KPZ7 1027 aaPredicted RBP11.54□□□□□ -0.56
CSNK1A1-204ENST00000504676 APLP2Q06481 763 aa11.54□□□□□ -0.56
CSNK1A1-204ENST00000504676 ABCC9O60706 1549 aa11.52□□□□□ -0.56
CSNK1A1-204ENST00000504676 PODXL2Q9NZ53 605 aa11.51□□□□□ -0.57
CSNK1A1-204ENST00000504676 TMEM132AQ24JP5 1023 aa11.5□□□□□ -0.57
CSNK1A1-204ENST00000504676 NACADO15069 1562 aa11.45□□□□□ -0.58
CSNK1A1-204ENST00000504676 FBLN2P98095 1184 aa11.44□□□□□ -0.58
CSNK1A1-204ENST00000504676 RSF1Q96T23 1441 aaPredicted RBP11.41□□□□□ -0.58
CSNK1A1-204ENST00000504676 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
CSNK1A1-204ENST00000504676 HRCP23327 699 aa11.39□□□□□ -0.59
CSNK1A1-204ENST00000504676 C14orf37Q86TY3 774 aa11.38□□□□□ -0.59
CSNK1A1-204ENST00000504676 POTEHQ6S545 545 aa11.36□□□□□ -0.59
CSNK1A1-204ENST00000504676 SCRIBQ14160 1630 aa11.36□□□□□ -0.59
CSNK1A1-204ENST00000504676 RB1CC1Q8TDY2 1594 aa11.34□□□□□ -0.59
CSNK1A1-204ENST00000504676 PELP1Q8IZL8 1130 aaKnown RBP11.33□□□□□ -0.59
CSNK1A1-204ENST00000504676 TTBK1Q5TCY1 1321 aaPredicted RBP11.32□□□□□ -0.6
CSNK1A1-204ENST00000504676 SPINK5Q9NQ38 1064 aaPredicted RBP11.31□□□□□ -0.6
CSNK1A1-204ENST00000504676 CAPN15O75808 1086 aa11.29□□□□□ -0.6
CSNK1A1-204ENST00000504676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.28□□□□□ -0.6
CSNK1A1-204ENST00000504676 HNRNPUL2Q1KMD3 747 aaKnown RBP11.28□□□□□ -0.6
CSNK1A1-204ENST00000504676 MYCNP04198 464 aaPredicted RBP11.25□□□□□ -0.61
CSNK1A1-204ENST00000504676 PCGF6Q9BYE7 350 aa11.24□□□□□ -0.61
CSNK1A1-204ENST00000504676 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
CSNK1A1-204ENST00000504676 NPM2Q86SE8 214 aaKnown RBP11.23□□□□□ -0.61
CSNK1A1-204ENST00000504676 LOC105371045A0A1W2PR82 267 aa11.21□□□□□ -0.62
CSNK1A1-204ENST00000504676 TRIM26Q12899 539 aaPredicted RBP11.21□□□□□ -0.62
CSNK1A1-204ENST00000504676 TRIM41Q8WV44 630 aa11.2□□□□□ -0.62
CSNK1A1-204ENST00000504676 TRHP20396 242 aaPredicted RBP11.17□□□□□ -0.62
CSNK1A1-204ENST00000504676 DSG3P32926 999 aa11.17□□□□□ -0.62
CSNK1A1-204ENST00000504676 MYT1Q01538 1121 aa11.15□□□□□ -0.62
CSNK1A1-204ENST00000504676 MROH2BQ7Z745 1585 aa11.15□□□□□ -0.62
CSNK1A1-204ENST00000504676 CECR2Q9BXF3 1484 aa11.15□□□□□ -0.63
CSNK1A1-204ENST00000504676 BAZ1AQ9NRL2 1556 aaPredicted RBP11.14□□□□□ -0.63
CSNK1A1-204ENST00000504676 ZNF219Q9P2Y4 722 aaPredicted RBP11.13□□□□□ -0.63
CSNK1A1-204ENST00000504676 PAXIP1Q6ZW49 1069 aaPredicted RBP11.11□□□□□ -0.63
CSNK1A1-204ENST00000504676 FBXO3Q9UK99 471 aa11.11□□□□□ -0.63
CSNK1A1-204ENST00000504676 ZEB1P37275 1124 aaPredicted RBP11.11□□□□□ -0.63
CSNK1A1-204ENST00000504676 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.08□□□□□ -0.64
CSNK1A1-204ENST00000504676 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms