RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 ITPR2Q14571 2701 aa2.93□□□□□ -1.94
LINC01340-201ENST00000504012 COL6A5A8TX70 2615 aa2.92□□□□□ -1.94
LINC01340-201ENST00000504012 CACNA1AO00555 2505 aa2.92□□□□□ -1.94
LINC01340-201ENST00000504012 LYSTQ99698 3801 aa2.92□□□□□ -1.94
LINC01340-201ENST00000504012 TENM1Q9UKZ4 2725 aa2.92□□□□□ -1.94
LINC01340-201ENST00000504012 FLNBO75369 2602 aaKnown RBP2.92□□□□□ -1.94
LINC01340-201ENST00000504012 DNAH10Q8IVF4 4471 aa2.91□□□□□ -1.94
LINC01340-201ENST00000504012 INE1O15225 51 aa2.91□□□□□ -1.94
LINC01340-201ENST00000504012 DYNC2H1Q8NCM8 4307 aaKnown RBP2.91□□□□□ -1.94
LINC01340-201ENST00000504012 ATRQ13535 2644 aa2.9□□□□□ -1.94
LINC01340-201ENST00000504012 ANK2Q01484 3957 aa2.9□□□□□ -1.94
LINC01340-201ENST00000504012 NOTCH1P46531 2555 aa2.9□□□□□ -1.94
LINC01340-201ENST00000504012 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
LINC01340-201ENST00000504012 STAB2Q8WWQ8 2551 aa2.9□□□□□ -1.95
LINC01340-201ENST00000504012 CUBNO60494 3623 aa2.88□□□□□ -1.95
LINC01340-201ENST00000504012 FRAS1Q86XX4 4008 aa2.87□□□□□ -1.95
LINC01340-201ENST00000504012 DNAH17Q9UFH2 4485 aa2.87□□□□□ -1.95
LINC01340-201ENST00000504012 C9orf92A6NGG3 77 aa2.86□□□□□ -1.95
LINC01340-201ENST00000504012 ZNF469Q96JG9 3925 aaPredicted RBP2.86□□□□□ -1.95
LINC01340-201ENST00000504012 NSD1Q96L73 2696 aaPredicted RBP2.85□□□□□ -1.95
LINC01340-201ENST00000504012 DNAH9Q9NYC9 4486 aa2.84□□□□□ -1.95
LINC01340-201ENST00000504012 COL7A1Q02388 2944 aa2.84□□□□□ -1.96
LINC01340-201ENST00000504012 USP24Q9UPU5 2620 aa2.84□□□□□ -1.96
LINC01340-201ENST00000504012 CSMD3Q7Z407 3707 aa2.83□□□□□ -1.96
LINC01340-201ENST00000504012 DNAH2Q9P225 4427 aa2.83□□□□□ -1.96
LINC01340-201ENST00000504012 HUWE1Q7Z6Z7 4374 aaKnown RBP2.83□□□□□ -1.96
LINC01340-201ENST00000504012 DMBT1Q9UGM3 2413 aaPredicted RBP2.83□□□□□ -1.96
LINC01340-201ENST00000504012 PRKDCP78527 4128 aaKnown RBP2.83□□□□□ -1.96
LINC01340-201ENST00000504012 HECTD4Q9Y4D8 3996 aa2.82□□□□□ -1.96
LINC01340-201ENST00000504012 KRTAP10-8P60410 259 aa2.82□□□□□ -1.96
LINC01340-201ENST00000504012 DNAH7Q8WXX0 4024 aa2.82□□□□□ -1.96
LINC01340-201ENST00000504012 DNAH6Q9C0G6 4158 aa2.82□□□□□ -1.96
LINC01340-201ENST00000504012 FBN3Q75N90 2809 aa2.8□□□□□ -1.96
LINC01340-201ENST00000504012 J3QKU1 62 aa2.8□□□□□ -1.96
LINC01340-201ENST00000504012 KRTAP10-1P60331 282 aa2.79□□□□□ -1.96
LINC01340-201ENST00000504012 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
LINC01340-201ENST00000504012 CMYA5Q8N3K9 4069 aa2.79□□□□□ -1.96
LINC01340-201ENST00000504012 DNAH11Q96DT5 4516 aa2.78□□□□□ -1.96
LINC01340-201ENST00000504012 SACSQ9NZJ4 4579 aa2.77□□□□□ -1.97
LINC01340-201ENST00000504012 STAB1Q9NY15 2570 aa2.76□□□□□ -1.97
LINC01340-201ENST00000504012 MGAM2Q2M2H8 2515 aa2.76□□□□□ -1.97
LINC01340-201ENST00000504012 Q5VSD8 79 aa2.73□□□□□ -1.97
LINC01340-201ENST00000504012 PLECQ15149 4684 aaKnown RBP2.69□□□□□ -1.98
LINC01340-201ENST00000504012 KMT2AQ03164 3969 aa2.67□□□□□ -1.98
LINC01340-201ENST00000504012 TNP1P09430 55 aa2.66□□□□□ -1.98
LINC01340-201ENST00000504012 LRP1BQ9NZR2 4599 aa2.64□□□□□ -1.99
LINC01340-201ENST00000504012 MYCBP2O75592 4640 aa2.64□□□□□ -1.99
LINC01340-201ENST00000504012 PKHD1L1Q86WI1 4243 aa2.64□□□□□ -1.99
LINC01340-201ENST00000504012 KRTAP10-4P60372 401 aaPredicted RBP2.64□□□□□ -1.99
LINC01340-201ENST00000504012 DNAH5Q8TE73 4624 aa2.62□□□□□ -1.99
LINC01340-201ENST00000504012 LRP1Q07954 4544 aaKnown RBP2.6□□□□□ -1.99
LINC01340-201ENST00000504012 VPS13BQ7Z7G8 4022 aa2.56□□□□□ -2
LINC01340-201ENST00000504012 PKHD1P08F94 4074 aa2.56□□□□□ -2
LINC01340-201ENST00000504012 APOBP04114 4563 aaKnown RBP2.56□□□□□ -2
LINC01340-201ENST00000504012 PKD1P98161 4303 aa2.55□□□□□ -2
LINC01340-201ENST00000504012 STARD9Q9P2P6 4700 aa2.54□□□□□ -2
LINC01340-201ENST00000504012 TNXBP22105 4242 aa2.53□□□□□ -2
LINC01340-201ENST00000504012 A0A1B0GVY2 172 aa2.52□□□□□ -2.01
LINC01340-201ENST00000504012 FAT2Q9NYQ8 4349 aa2.52□□□□□ -2.01
LINC01340-201ENST00000504012 SMR3BP02814 79 aaPredicted RBP2.51□□□□□ -2.01
LINC01340-201ENST00000504012 DYNC1H1Q14204 4646 aaKnown RBP2.51□□□□□ -2.01
LINC01340-201ENST00000504012 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
LINC01340-201ENST00000504012 FAT3Q8TDW7 4589 aa2.5□□□□□ -2.01
LINC01340-201ENST00000504012 HSPG2P98160 4391 aa2.48□□□□□ -2.01
LINC01340-201ENST00000504012 FAT1Q14517 4588 aa2.46□□□□□ -2.02
LINC01340-201ENST00000504012 KRTAP5-9P26371 169 aa2.45□□□□□ -2.02
LINC01340-201ENST00000504012 KRTAP8-1Q8IUC2 63 aa2.44□□□□□ -2.02
LINC01340-201ENST00000504012 KRTAP10-10P60014 251 aa2.43□□□□□ -2.02
LINC01340-201ENST00000504012 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
LINC01340-201ENST00000504012 KRTAP2-2Q9BYT5 123 aa2.43□□□□□ -2.02
LINC01340-201ENST00000504012 FLGP20930 4061 aaPredicted RBP2.41□□□□□ -2.02
LINC01340-201ENST00000504012 MT3P25713 68 aa2.39□□□□□ -2.03
LINC01340-201ENST00000504012 LCE3AQ5TA76 89 aa2.37□□□□□ -2.03
LINC01340-201ENST00000504012 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
LINC01340-201ENST00000504012 KRTAP10-12P60413 245 aa2.36□□□□□ -2.03
LINC01340-201ENST00000504012 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
LINC01340-201ENST00000504012 MT1HL1P0DM35 61 aa2.35□□□□□ -2.03
LINC01340-201ENST00000504012 KRTAP19-2Q3LHN2 52 aa2.35□□□□□ -2.03
LINC01340-201ENST00000504012 LCE1AQ5T7P2 110 aa2.35□□□□□ -2.03
LINC01340-201ENST00000504012 SPRR2GQ9BYE4 73 aa2.31□□□□□ -2.04
LINC01340-201ENST00000504012 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
LINC01340-201ENST00000504012 KRTAP12-3P60328 96 aa2.29□□□□□ -2.04
LINC01340-201ENST00000504012 KRTAP10-5P60370 271 aa2.28□□□□□ -2.04
LINC01340-201ENST00000504012 KRTAP2-3P0C7H8 128 aa2.27□□□□□ -2.05
LINC01340-201ENST00000504012 KRTAP2-4Q9BYR9 128 aa2.27□□□□□ -2.05
LINC01340-201ENST00000504012 KRTAP2-1Q9BYU5 128 aa2.27□□□□□ -2.05
LINC01340-201ENST00000504012 DNHD1Q96M86 4753 aa2.26□□□□□ -2.05
LINC01340-201ENST00000504012 HERC1Q15751 4861 aa2.26□□□□□ -2.05
LINC01340-201ENST00000504012 KRTAP4-1Q9BYQ7 146 aa2.23□□□□□ -2.05
LINC01340-201ENST00000504012 LCE3CQ5T5A8 94 aa2.21□□□□□ -2.06
LINC01340-201ENST00000504012 HYDINQ4G0P3 5121 aa2.2□□□□□ -2.06
LINC01340-201ENST00000504012 KRTAP19-8Q3LI54 63 aa2.18□□□□□ -2.06
LINC01340-201ENST00000504012 MUC17Q685J3 4493 aa2.18□□□□□ -2.06
LINC01340-201ENST00000504012 LPAP08519 4548 aa2.17□□□□□ -2.06
LINC01340-201ENST00000504012 LRP2P98164 4655 aa2.17□□□□□ -2.06
LINC01340-201ENST00000504012 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
LINC01340-201ENST00000504012 M0R2T5 61 aa2.13□□□□□ -2.07
LINC01340-201ENST00000504012 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
LINC01340-201ENST00000504012 KMT2CQ8NEZ4 4911 aaKnown RBP2.1□□□□□ -2.07
LINC01340-201ENST00000504012 MT1XP80297 61 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms