RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 AEBP2Q6ZN18 517 aaPredicted RBP13.23□□□□□ -0.29
LINC01340-201ENST00000504012 CHIC1Q5VXU3 224 aa12.39□□□□□ -0.43
LINC01340-201ENST00000504012 SENP3Q9H4L4 574 aaPredicted RBP11.24□□□□□ -0.61
LINC01340-201ENST00000504012 PHF23Q9BUL5 403 aaPredicted RBP11.09□□□□□ -0.63
LINC01340-201ENST00000504012 POTEDQ86YR6 584 aa11.08□□□□□ -0.64
LINC01340-201ENST00000504012 PELP1Q8IZL8 1130 aaKnown RBP10.65□□□□□ -0.7
LINC01340-201ENST00000504012 FOXD1Q16676 465 aa10.54□□□□□ -0.72
LINC01340-201ENST00000504012 MYT1Q01538 1121 aa10.49□□□□□ -0.73
LINC01340-201ENST00000504012 SLC24A1O60721 1099 aa10.44□□□□□ -0.74
LINC01340-201ENST00000504012 HRCP23327 699 aa10.13□□□□□ -0.79
LINC01340-201ENST00000504012 NISCHQ9Y2I1 1504 aa10.07□□□□□ -0.8
LINC01340-201ENST00000504012 TTBK1Q5TCY1 1321 aaPredicted RBP10.05□□□□□ -0.8
LINC01340-201ENST00000504012 MSH5O43196 834 aa9.85□□□□□ -0.83
LINC01340-201ENST00000504012 PLPPR3Q6T4P5 718 aa9.81□□□□□ -0.84
LINC01340-201ENST00000504012 PIAS4Q8N2W9 510 aaPredicted RBP9.79□□□□□ -0.84
LINC01340-201ENST00000504012 PPP6R1Q9UPN7 881 aa9.76□□□□□ -0.85
LINC01340-201ENST00000504012 ADRA2BP18089 450 aa9.71□□□□□ -0.86
LINC01340-201ENST00000504012 SCAF1Q9H7N4 1312 aaKnown RBP9.65□□□□□ -0.86
LINC01340-201ENST00000504012 DAXXQ9UER7 740 aaPredicted RBP9.65□□□□□ -0.86
LINC01340-201ENST00000504012 ZEB1P37275 1124 aaPredicted RBP9.58□□□□□ -0.88
LINC01340-201ENST00000504012 PPARGC1BQ86YN6 1023 aaKnown RBP9.54□□□□□ -0.88
LINC01340-201ENST00000504012 PCGF6Q9BYE7 350 aa9.49□□□□□ -0.89
LINC01340-201ENST00000504012 DCAF1Q9Y4B6 1507 aa9.49□□□□□ -0.89
LINC01340-201ENST00000504012 ACIN1Q9UKV3 1341 aaKnown RBP9.43□□□□□ -0.9
LINC01340-201ENST00000504012 NCBP3Q53F19 620 aaKnown RBP9.4□□□□□ -0.9
LINC01340-201ENST00000504012 CCDC180Q9P1Z9 1646 aa9.39□□□□□ -0.91
LINC01340-201ENST00000504012 CENPBP07199 599 aaPredicted RBP9.37□□□□□ -0.91
LINC01340-201ENST00000504012 ERICH6Q7L0X2 663 aa9.36□□□□□ -0.91
LINC01340-201ENST00000504012 EHMT2Q96KQ7 1210 aa9.36□□□□□ -0.91
LINC01340-201ENST00000504012 TRIM26Q12899 539 aaPredicted RBP9.34□□□□□ -0.91
LINC01340-201ENST00000504012 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
LINC01340-201ENST00000504012 BCL11AQ9H165 835 aa9.3□□□□□ -0.92
LINC01340-201ENST00000504012 AMER1Q5JTC6 1135 aaPredicted RBP9.26□□□□□ -0.93
LINC01340-201ENST00000504012 APLP2Q06481 763 aa9.25□□□□□ -0.93
LINC01340-201ENST00000504012 NEUROD1Q13562 356 aa9.24□□□□□ -0.93
LINC01340-201ENST00000504012 GTF3C3Q9Y5Q9 886 aa9.24□□□□□ -0.93
LINC01340-201ENST00000504012 PRKCSHP14314 528 aaPredicted RBP9.23□□□□□ -0.93
LINC01340-201ENST00000504012 RTN4Q9NQC3 1192 aaKnown RBP9.19□□□□□ -0.94
LINC01340-201ENST00000504012 FAM9AQ8IZU1 332 aaPredicted RBP9.15□□□□□ -0.94
LINC01340-201ENST00000504012 ANP32EQ9BTT0 268 aa9.15□□□□□ -0.94
LINC01340-201ENST00000504012 ARXQ96QS3 562 aa9.14□□□□□ -0.95
LINC01340-201ENST00000504012 CLSPNQ9HAW4 1339 aa9.13□□□□□ -0.95
LINC01340-201ENST00000504012 DIEXFQ68CQ4 756 aaKnown RBP8.99□□□□□ -0.97
LINC01340-201ENST00000504012 SUPT5HO00267 1087 aaKnown RBP8.98□□□□□ -0.97
LINC01340-201ENST00000504012 MAPK8IP2Q13387 824 aaPredicted RBP8.97□□□□□ -0.97
LINC01340-201ENST00000504012 CACNB1Q02641 598 aaPredicted RBP8.96□□□□□ -0.98
LINC01340-201ENST00000504012 TRIM41Q8WV44 630 aa8.92□□□□□ -0.98
LINC01340-201ENST00000504012 MYT1LQ9UL68 1186 aa8.91□□□□□ -0.98
LINC01340-201ENST00000504012 DMRT2Q9Y5R5 561 aa8.91□□□□□ -0.98
LINC01340-201ENST00000504012 RANGAP1P46060 587 aaPredicted RBP8.9□□□□□ -0.98
LINC01340-201ENST00000504012 CSRNP3Q8WYN3 585 aa8.9□□□□□ -0.98
LINC01340-201ENST00000504012 TSHZ2Q9NRE2 1034 aa8.85□□□□□ -0.99
LINC01340-201ENST00000504012 LOC105371045A0A1W2PR82 267 aa8.83□□□□□ -1
LINC01340-201ENST00000504012 ZNF316A6NFI3 1004 aaPredicted RBP8.82□□□□□ -1
LINC01340-201ENST00000504012 KCNA4P22459 653 aa8.8□□□□□ -1
LINC01340-201ENST00000504012 HOMEZQ8IX15 550 aa8.79□□□□□ -1
LINC01340-201ENST00000504012 ERICH6BQ5W0A0 696 aa8.77□□□□□ -1.01
LINC01340-201ENST00000504012 SUPT16HQ9Y5B9 1047 aaKnown RBP8.76□□□□□ -1.01
LINC01340-201ENST00000504012 SHROOM4Q9ULL8 1493 aa8.76□□□□□ -1.01
LINC01340-201ENST00000504012 CCER1Q8TC90 406 aaPredicted RBP8.74□□□□□ -1.01
LINC01340-201ENST00000504012 UBE2Q2Q8WVN8 375 aa8.72□□□□□ -1.01
LINC01340-201ENST00000504012 TIMELESSQ9UNS1 1208 aa8.72□□□□□ -1.01
LINC01340-201ENST00000504012 BCANQ96GW7 911 aa8.68□□□□□ -1.02
LINC01340-201ENST00000504012 TAOK2Q9UL54 1235 aa8.67□□□□□ -1.02
LINC01340-201ENST00000504012 MIER1Q8N108 512 aa8.66□□□□□ -1.02
LINC01340-201ENST00000504012 FANCIQ9NVI1 1328 aa8.64□□□□□ -1.03
LINC01340-201ENST00000504012 ZCCHC6Q5VYS8 1495 aaKnown RBP8.64□□□□□ -1.03
LINC01340-201ENST00000504012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.62□□□□□ -1.03
LINC01340-201ENST00000504012 YTHDC1Q96MU7 727 aaKnown RBP8.61□□□□□ -1.03
LINC01340-201ENST00000504012 RBM19Q9Y4C8 960 aaKnown RBP8.61□□□□□ -1.03
LINC01340-201ENST00000504012 TULP1O00294 542 aaPredicted RBP8.6□□□□□ -1.03
LINC01340-201ENST00000504012 EIF5BO60841 1220 aaKnown RBP8.6□□□□□ -1.03
LINC01340-201ENST00000504012 PPP4R3CPQ6ZMV5 832 aa8.6□□□□□ -1.03
LINC01340-201ENST00000504012 ANO8Q9HCE9 1232 aaPredicted RBP8.57□□□□□ -1.04
LINC01340-201ENST00000504012 DCAF8L1A6NGE4 600 aa8.53□□□□□ -1.04
LINC01340-201ENST00000504012 HOXD11P31277 338 aaPredicted RBP8.53□□□□□ -1.04
LINC01340-201ENST00000504012 DEKP35659 375 aaKnown RBP8.53□□□□□ -1.04
LINC01340-201ENST00000504012 WRNQ14191 1432 aaPredicted RBP eCLIP8.53□□□□□ -1.04
LINC01340-201ENST00000504012 POTEHQ6S545 545 aa8.52□□□□□ -1.05
LINC01340-201ENST00000504012 CNKSR2Q8WXI2 1034 aa8.45□□□□□ -1.06
LINC01340-201ENST00000504012 PODXL2Q9NZ53 605 aa8.45□□□□□ -1.06
LINC01340-201ENST00000504012 SALL2Q9Y467 1007 aaPredicted RBP8.45□□□□□ -1.06
LINC01340-201ENST00000504012 TPRNQ4KMQ1 711 aa8.44□□□□□ -1.06
LINC01340-201ENST00000504012 RNF39Q9H2S5 420 aa8.44□□□□□ -1.06
LINC01340-201ENST00000504012 NEFLP07196 543 aa8.42□□□□□ -1.06
LINC01340-201ENST00000504012 PLCB2Q00722 1185 aa8.42□□□□□ -1.06
LINC01340-201ENST00000504012 RNF216Q9NWF9 866 aaPredicted RBP8.42□□□□□ -1.06
LINC01340-201ENST00000504012 FBXO3Q9UK99 471 aa8.42□□□□□ -1.06
LINC01340-201ENST00000504012 KLHL34Q8N239 644 aa8.41□□□□□ -1.06
LINC01340-201ENST00000504012 PKNOX2Q96KN3 472 aa8.4□□□□□ -1.06
LINC01340-201ENST00000504012 C11orf95C9JLR9 678 aaPredicted RBP8.39□□□□□ -1.07
LINC01340-201ENST00000504012 FKBP8Q14318 412 aa8.38□□□□□ -1.07
LINC01340-201ENST00000504012 CDK11AQ9UQ88 783 aaPredicted RBP8.38□□□□□ -1.07
LINC01340-201ENST00000504012 SLC4A1APQ9BWU0 796 aaKnown RBP8.35□□□□□ -1.07
LINC01340-201ENST00000504012 GLIPR1L2Q4G1C9 344 aa8.34□□□□□ -1.07
LINC01340-201ENST00000504012 NPM2Q86SE8 214 aaKnown RBP8.33□□□□□ -1.08
LINC01340-201ENST00000504012 USP35Q9P2H5 1018 aa8.31□□□□□ -1.08
LINC01340-201ENST00000504012 RSPH6AQ9H0K4 717 aa8.3□□□□□ -1.08
LINC01340-201ENST00000504012 NOP58Q9Y2X3 529 aaKnown RBP8.3□□□□□ -1.08
LINC01340-201ENST00000504012 WASHC2AQ641Q2 1341 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms