RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 PKHD1L1Q86WI1 4243 aa1.81□□□□□ -2.12
PDCD4-211ENST00000498367 ANKHD1Q8IWZ3 2542 aaKnown RBP1.81□□□□□ -2.12
PDCD4-211ENST00000498367 DNAH7Q8WXX0 4024 aa1.81□□□□□ -2.12
PDCD4-211ENST00000498367 ACACBO00763 2458 aa1.8□□□□□ -2.12
PDCD4-211ENST00000498367 NBEAL2Q6ZNJ1 2754 aa1.79□□□□□ -2.12
PDCD4-211ENST00000498367 ANK3Q12955 4377 aaKnown RBP1.79□□□□□ -2.12
PDCD4-211ENST00000498367 FRAS1Q86XX4 4008 aa1.79□□□□□ -2.12
PDCD4-211ENST00000498367 HIVEP1P15822 2718 aa1.78□□□□□ -2.12
PDCD4-211ENST00000498367 DNAH2Q9P225 4427 aa1.78□□□□□ -2.12
PDCD4-211ENST00000498367 HTTP42858 3142 aa1.78□□□□□ -2.12
PDCD4-211ENST00000498367 DNAH12Q6ZR08 3092 aa1.78□□□□□ -2.12
PDCD4-211ENST00000498367 CUBNO60494 3623 aa1.78□□□□□ -2.13
PDCD4-211ENST00000498367 SRCAPQ6ZRS2 3230 aa1.78□□□□□ -2.13
PDCD4-211ENST00000498367 ZANQ9Y493 2812 aa1.77□□□□□ -2.13
PDCD4-211ENST00000498367 BOD1L1Q8NFC6 3051 aa1.77□□□□□ -2.13
PDCD4-211ENST00000498367 FLNBO75369 2602 aaKnown RBP1.76□□□□□ -2.13
PDCD4-211ENST00000498367 NOTCH1P46531 2555 aa1.76□□□□□ -2.13
PDCD4-211ENST00000498367 SPTBN5Q9NRC6 3674 aaKnown RBP1.76□□□□□ -2.13
PDCD4-211ENST00000498367 HECTD4Q9Y4D8 3996 aa1.75□□□□□ -2.13
PDCD4-211ENST00000498367 MKI67P46013 3256 aaKnown RBP1.75□□□□□ -2.13
PDCD4-211ENST00000498367 SONP18583 2426 aaKnown RBP1.75□□□□□ -2.13
PDCD4-211ENST00000498367 CFAP46Q8IYW2 2715 aa1.75□□□□□ -2.13
PDCD4-211ENST00000498367 SMG1Q96Q15 3661 aaKnown RBP1.75□□□□□ -2.13
PDCD4-211ENST00000498367 ZFYVE26Q68DK2 2539 aa1.74□□□□□ -2.13
PDCD4-211ENST00000498367 CSMD1Q96PZ7 3565 aa1.73□□□□□ -2.13
PDCD4-211ENST00000498367 FLGP20930 4061 aaPredicted RBP1.73□□□□□ -2.13
PDCD4-211ENST00000498367 HUWE1Q7Z6Z7 4374 aaKnown RBP1.73□□□□□ -2.13
PDCD4-211ENST00000498367 TLN2Q9Y4G6 2542 aa1.72□□□□□ -2.13
PDCD4-211ENST00000498367 SPRR2DP22532 72 aa1.71□□□□□ -2.14
PDCD4-211ENST00000498367 KALRNO60229 2985 aa1.7□□□□□ -2.14
PDCD4-211ENST00000498367 MT1AP04731 61 aa1.7□□□□□ -2.14
PDCD4-211ENST00000498367 SPRR2BP35325 72 aa1.7□□□□□ -2.14
PDCD4-211ENST00000498367 USP9XQ93008 2570 aaPredicted RBP1.7□□□□□ -2.14
PDCD4-211ENST00000498367 PKD1P98161 4303 aa1.7□□□□□ -2.14
PDCD4-211ENST00000498367 FREM2Q5SZK8 3169 aa1.69□□□□□ -2.14
PDCD4-211ENST00000498367 SMR3BP02814 79 aaPredicted RBP1.69□□□□□ -2.14
PDCD4-211ENST00000498367 HRNRQ86YZ3 2850 aaPredicted RBP1.69□□□□□ -2.14
PDCD4-211ENST00000498367 LAMA3Q16787 3333 aa1.69□□□□□ -2.14
PDCD4-211ENST00000498367 MXRA5Q9NR99 2828 aa1.67□□□□□ -2.14
PDCD4-211ENST00000498367 HSPG2P98160 4391 aa1.67□□□□□ -2.14
PDCD4-211ENST00000498367 DCHS1Q96JQ0 3298 aa1.66□□□□□ -2.14
PDCD4-211ENST00000498367 DNAH6Q9C0G6 4158 aa1.66□□□□□ -2.14
PDCD4-211ENST00000498367 TGP01266 2768 aa1.65□□□□□ -2.14
PDCD4-211ENST00000498367 DMDP11532 3685 aa1.65□□□□□ -2.15
PDCD4-211ENST00000498367 HTN3P15516 51 aa1.65□□□□□ -2.15
PDCD4-211ENST00000498367 ITPR2Q14571 2701 aa1.64□□□□□ -2.15
PDCD4-211ENST00000498367 TEX15Q9BXT5 2789 aa1.64□□□□□ -2.15
PDCD4-211ENST00000498367 MYO18BQ8IUG5 2567 aa1.64□□□□□ -2.15
PDCD4-211ENST00000498367 CMYA5Q8N3K9 4069 aa1.63□□□□□ -2.15
PDCD4-211ENST00000498367 CRCT1Q9UGL9 99 aa1.63□□□□□ -2.15
PDCD4-211ENST00000498367 DNAH10Q8IVF4 4471 aa1.63□□□□□ -2.15
PDCD4-211ENST00000498367 XIRP2A4UGR9 3374 aa1.62□□□□□ -2.15
PDCD4-211ENST00000498367 SPRR2AP35326 72 aa1.62□□□□□ -2.15
PDCD4-211ENST00000498367 MUC3AQ02505 3323 aa1.61□□□□□ -2.15
PDCD4-211ENST00000498367 CENPEQ02224 2701 aa1.61□□□□□ -2.15
PDCD4-211ENST00000498367 SVEP1Q4LDE5 3571 aa1.61□□□□□ -2.15
PDCD4-211ENST00000498367 FLNAP21333 2647 aaKnown RBP1.6□□□□□ -2.15
PDCD4-211ENST00000498367 TEP1Q99973 2627 aaKnown RBP1.6□□□□□ -2.15
PDCD4-211ENST00000498367 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
PDCD4-211ENST00000498367 DOPEY1Q5JWR5 2465 aa1.59□□□□□ -2.15
PDCD4-211ENST00000498367 KRTAP4-1Q9BYQ7 146 aa1.59□□□□□ -2.15
PDCD4-211ENST00000498367 WDFY4Q6ZS81 3184 aa1.59□□□□□ -2.16
PDCD4-211ENST00000498367 DNAH1Q9P2D7 4330 aa1.58□□□□□ -2.16
PDCD4-211ENST00000498367 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
PDCD4-211ENST00000498367 NBEAL1Q6ZS30 2694 aa1.58□□□□□ -2.16
PDCD4-211ENST00000498367 ADGRG4Q8IZF6 3080 aa1.58□□□□□ -2.16
PDCD4-211ENST00000498367 FASNP49327 2511 aaKnown RBP1.57□□□□□ -2.16
PDCD4-211ENST00000498367 VPS13AQ96RL7 3174 aa1.57□□□□□ -2.16
PDCD4-211ENST00000498367 TENM3Q9P273 2699 aa1.56□□□□□ -2.16
PDCD4-211ENST00000498367 FCGBPQ9Y6R7 5405 aaPredicted RBP1.56□□□□□ -2.16
PDCD4-211ENST00000498367 LRP1Q07954 4544 aaKnown RBP1.56□□□□□ -2.16
PDCD4-211ENST00000498367 FAT3Q8TDW7 4589 aa1.56□□□□□ -2.16
PDCD4-211ENST00000498367 LOC400499M0QZD8 3231 aa1.54□□□□□ -2.16
PDCD4-211ENST00000498367 DNAH9Q9NYC9 4486 aa1.52□□□□□ -2.17
PDCD4-211ENST00000498367 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
PDCD4-211ENST00000498367 PKHD1P08F94 4074 aa1.51□□□□□ -2.17
PDCD4-211ENST00000498367 CFAP47Q6ZTR5 3102 aa1.51□□□□□ -2.17
PDCD4-211ENST00000498367 CSMD2Q7Z408 3487 aa1.5□□□□□ -2.17
PDCD4-211ENST00000498367 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
PDCD4-211ENST00000498367 MGAM2Q2M2H8 2515 aa1.5□□□□□ -2.17
PDCD4-211ENST00000498367 TRRAPQ9Y4A5 3859 aa1.5□□□□□ -2.17
PDCD4-211ENST00000498367 CEP295Q9C0D2 2601 aa1.5□□□□□ -2.17
PDCD4-211ENST00000498367 SPEGQ15772 3267 aa1.49□□□□□ -2.17
PDCD4-211ENST00000498367 SPTAN1Q13813 2472 aaKnown RBP1.49□□□□□ -2.17
PDCD4-211ENST00000498367 LAMA2P24043 3122 aaKnown RBP1.47□□□□□ -2.17
PDCD4-211ENST00000498367 APOBP04114 4563 aaKnown RBP1.47□□□□□ -2.17
PDCD4-211ENST00000498367 MAST4O15021 2626 aa1.47□□□□□ -2.17
PDCD4-211ENST00000498367 LPAP08519 4548 aa1.46□□□□□ -2.18
PDCD4-211ENST00000498367 SYNE1Q8NF91 8797 aaKnown RBP1.46□□□□□ -2.18
PDCD4-211ENST00000498367 SPRR2FQ96RM1 72 aa1.46□□□□□ -2.18
PDCD4-211ENST00000498367 UTRNP46939 3433 aa1.46□□□□□ -2.18
PDCD4-211ENST00000498367 LAMA1P25391 3075 aa1.46□□□□□ -2.18
PDCD4-211ENST00000498367 PCNTO95613 3336 aa1.45□□□□□ -2.18
PDCD4-211ENST00000498367 GOLGB1Q14789 3259 aaKnown RBP1.45□□□□□ -2.18
PDCD4-211ENST00000498367 TENM1Q9UKZ4 2725 aa1.43□□□□□ -2.18
PDCD4-211ENST00000498367 SPRR2EP22531 72 aa1.43□□□□□ -2.18
PDCD4-211ENST00000498367 PLECQ15149 4684 aaKnown RBP1.43□□□□□ -2.18
PDCD4-211ENST00000498367 USP34Q70CQ2 3546 aa1.42□□□□□ -2.18
PDCD4-211ENST00000498367 VPS13CQ709C8 3753 aa1.42□□□□□ -2.18
PDCD4-211ENST00000498367 DEFB4AO15263 64 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms