RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 AEBP2Q6ZN18 517 aaPredicted RBP25.03■■□□□ 1.6
PDCD4-211ENST00000498367 CHIC1Q5VXU3 224 aa23.72■■□□□ 1.39
PDCD4-211ENST00000498367 SENP3Q9H4L4 574 aaPredicted RBP21.3■■□□□ 1
PDCD4-211ENST00000498367 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
PDCD4-211ENST00000498367 FOXD1Q16676 465 aa19.88■□□□□ 0.77
PDCD4-211ENST00000498367 PLPPR3Q6T4P5 718 aa18.9■□□□□ 0.62
PDCD4-211ENST00000498367 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
PDCD4-211ENST00000498367 MSH5O43196 834 aa18.58■□□□□ 0.56
PDCD4-211ENST00000498367 PPP6R1Q9UPN7 881 aa18.57■□□□□ 0.56
PDCD4-211ENST00000498367 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
PDCD4-211ENST00000498367 ADRA2BP18089 450 aa18.47■□□□□ 0.55
PDCD4-211ENST00000498367 MAPK8IP2Q13387 824 aaPredicted RBP16.98■□□□□ 0.31
PDCD4-211ENST00000498367 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
PDCD4-211ENST00000498367 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
PDCD4-211ENST00000498367 PPP4R3CPQ6ZMV5 832 aa16.57■□□□□ 0.24
PDCD4-211ENST00000498367 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
PDCD4-211ENST00000498367 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
PDCD4-211ENST00000498367 CACNB1Q02641 598 aaPredicted RBP16.17■□□□□ 0.18
PDCD4-211ENST00000498367 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
PDCD4-211ENST00000498367 DCAF8L1A6NGE4 600 aa16.07■□□□□ 0.16
PDCD4-211ENST00000498367 RNF39Q9H2S5 420 aa15.89■□□□□ 0.13
PDCD4-211ENST00000498367 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
PDCD4-211ENST00000498367 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
PDCD4-211ENST00000498367 NPM3O75607 178 aaKnown RBP15.72■□□□□ 0.11
PDCD4-211ENST00000498367 C1QBPQ07021 282 aaKnown RBP15.63■□□□□ 0.09
PDCD4-211ENST00000498367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.42■□□□□ 0.06
PDCD4-211ENST00000498367 KCNA4P22459 653 aa15.38■□□□□ 0.05
PDCD4-211ENST00000498367 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
PDCD4-211ENST00000498367 U3KPZ7 1027 aaPredicted RBP15.18■□□□□ 0.02
PDCD4-211ENST00000498367 SLC4A2P04920 1241 aa15.04■□□□□ -0
PDCD4-211ENST00000498367 SPINK5Q9NQ38 1064 aaPredicted RBP14.94□□□□□ -0.02
PDCD4-211ENST00000498367 DSG3P32926 999 aa14.86□□□□□ -0.03
PDCD4-211ENST00000498367 CAPN15O75808 1086 aa14.84□□□□□ -0.03
PDCD4-211ENST00000498367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
PDCD4-211ENST00000498367 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
PDCD4-211ENST00000498367 APLP2Q06481 763 aa14.67□□□□□ -0.06
PDCD4-211ENST00000498367 POTEHQ6S545 545 aa14.66□□□□□ -0.06
PDCD4-211ENST00000498367 ZNF219Q9P2Y4 722 aaPredicted RBP14.63□□□□□ -0.07
PDCD4-211ENST00000498367 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
PDCD4-211ENST00000498367 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
PDCD4-211ENST00000498367 ABCB7O75027 752 aa14.52□□□□□ -0.09
PDCD4-211ENST00000498367 MYCNP04198 464 aaPredicted RBP14.52□□□□□ -0.09
PDCD4-211ENST00000498367 SLC4A1APQ9BWU0 796 aaKnown RBP14.47□□□□□ -0.09
PDCD4-211ENST00000498367 FOXD4L1Q9NU39 408 aa14.35□□□□□ -0.11
PDCD4-211ENST00000498367 POLA2Q14181 598 aa14.24□□□□□ -0.13
PDCD4-211ENST00000498367 EHMT2Q96KQ7 1210 aa14.22□□□□□ -0.13
PDCD4-211ENST00000498367 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
PDCD4-211ENST00000498367 ZBTB22O15209 634 aa14.19□□□□□ -0.14
PDCD4-211ENST00000498367 RBM42Q9BTD8 480 aaKnown RBP14.13□□□□□ -0.15
PDCD4-211ENST00000498367 ZBTB12Q9Y330 459 aaPredicted RBP13.96□□□□□ -0.17
PDCD4-211ENST00000498367 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
PDCD4-211ENST00000498367 CHRDL2Q6WN34 429 aa13.84□□□□□ -0.19
PDCD4-211ENST00000498367 DAXXQ9UER7 740 aaPredicted RBP13.84□□□□□ -0.19
PDCD4-211ENST00000498367 AKT1S1Q96B36 256 aa13.83□□□□□ -0.2
PDCD4-211ENST00000498367 OSCARQ8IYS5 282 aa13.81□□□□□ -0.2
PDCD4-211ENST00000498367 AMER1Q5JTC6 1135 aaPredicted RBP13.79□□□□□ -0.2
PDCD4-211ENST00000498367 REM2Q8IYK8 340 aaPredicted RBP13.7□□□□□ -0.22
PDCD4-211ENST00000498367 RTN4Q9NQC3 1192 aaKnown RBP13.65□□□□□ -0.22
PDCD4-211ENST00000498367 FBLN2P98095 1184 aa13.57□□□□□ -0.24
PDCD4-211ENST00000498367 MKRN4PQ13434 485 aaPredicted RBP13.57□□□□□ -0.24
PDCD4-211ENST00000498367 PITPNM1O00562 1244 aa13.56□□□□□ -0.24
PDCD4-211ENST00000498367 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
PDCD4-211ENST00000498367 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
PDCD4-211ENST00000498367 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
PDCD4-211ENST00000498367 PIP4P2Q8N4L2 257 aa13.53□□□□□ -0.24
PDCD4-211ENST00000498367 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
PDCD4-211ENST00000498367 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.25
PDCD4-211ENST00000498367 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
PDCD4-211ENST00000498367 TTBK1Q5TCY1 1321 aaPredicted RBP13.43□□□□□ -0.26
PDCD4-211ENST00000498367 SSUH2Q9Y2M2 353 aa13.42□□□□□ -0.26
PDCD4-211ENST00000498367 ZNF692Q9BU19 519 aaPredicted RBP13.34□□□□□ -0.27
PDCD4-211ENST00000498367 MYT1Q01538 1121 aa13.3□□□□□ -0.28
PDCD4-211ENST00000498367 HAX1O00165 279 aa13.29□□□□□ -0.28
PDCD4-211ENST00000498367 SPDYE1Q8NFV5 336 aaPredicted RBP13.29□□□□□ -0.28
PDCD4-211ENST00000498367 ARXQ96QS3 562 aa13.25□□□□□ -0.29
PDCD4-211ENST00000498367 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.29
PDCD4-211ENST00000498367 PELP1Q8IZL8 1130 aaKnown RBP13.2□□□□□ -0.3
PDCD4-211ENST00000498367 PRKAR2AP13861 404 aaKnown RBP13.17□□□□□ -0.3
PDCD4-211ENST00000498367 PABPN1Q86U42 306 aaKnown RBP eCLIP13.15□□□□□ -0.3
PDCD4-211ENST00000498367 EVX2Q03828 476 aa13.14□□□□□ -0.31
PDCD4-211ENST00000498367 C19orf67A6NJJ6 358 aa13.04□□□□□ -0.32
PDCD4-211ENST00000498367 PRR29P0C7W0 189 aa13.01□□□□□ -0.33
PDCD4-211ENST00000498367 CHADLQ6NUI6 762 aa13.01□□□□□ -0.33
PDCD4-211ENST00000498367 ERICH6Q7L0X2 663 aa12.99□□□□□ -0.33
PDCD4-211ENST00000498367 RANGAP1P46060 587 aaPredicted RBP12.96□□□□□ -0.33
PDCD4-211ENST00000498367 BCANQ96GW7 911 aa12.87□□□□□ -0.35
PDCD4-211ENST00000498367 PRKCSHP14314 528 aaPredicted RBP12.86□□□□□ -0.35
PDCD4-211ENST00000498367 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
PDCD4-211ENST00000498367 FARP1Q9Y4F1 1045 aaPredicted RBP12.84□□□□□ -0.35
PDCD4-211ENST00000498367 GABBR2O75899 941 aa12.82□□□□□ -0.36
PDCD4-211ENST00000498367 HOMEZQ8IX15 550 aa12.81□□□□□ -0.36
PDCD4-211ENST00000498367 TAOK2Q9UL54 1235 aa12.79□□□□□ -0.36
PDCD4-211ENST00000498367 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
PDCD4-211ENST00000498367 CREBZFQ9NS37 354 aa12.77□□□□□ -0.37
PDCD4-211ENST00000498367 CD44P16070 742 aaKnown RBP12.75□□□□□ -0.37
PDCD4-211ENST00000498367 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
PDCD4-211ENST00000498367 LHX8Q68G74 356 aa12.69□□□□□ -0.38
PDCD4-211ENST00000498367 PROM2Q8N271 834 aa12.66□□□□□ -0.38
PDCD4-211ENST00000498367 CLCN6P51797 869 aa12.62□□□□□ -0.39
PDCD4-211ENST00000498367 TULP1O00294 542 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms