RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 FREM2Q5SZK8 3169 aa0.77□□□□□ -2.29
KDM3A-213ENST00000488971 SPTBN5Q9NRC6 3674 aaKnown RBP0.77□□□□□ -2.29
KDM3A-213ENST00000488971 KMT2AQ03164 3969 aa0.77□□□□□ -2.29
KDM3A-213ENST00000488971 DMBT1Q9UGM3 2413 aaPredicted RBP0.76□□□□□ -2.29
KDM3A-213ENST00000488971 EP400Q96L91 3159 aa0.76□□□□□ -2.29
KDM3A-213ENST00000488971 DNAH8Q96JB1 4490 aa0.76□□□□□ -2.29
KDM3A-213ENST00000488971 NAV2Q8IVL1 2488 aa0.76□□□□□ -2.29
KDM3A-213ENST00000488971 NBPF19A0A087WUL8 3843 aa0.76□□□□□ -2.29
KDM3A-213ENST00000488971 LAMA1P25391 3075 aa0.75□□□□□ -2.29
KDM3A-213ENST00000488971 USP9YO00507 2555 aaPredicted RBP0.75□□□□□ -2.29
KDM3A-213ENST00000488971 XIRP2A4UGR9 3374 aa0.75□□□□□ -2.29
KDM3A-213ENST00000488971 NBASA2RRP1 2371 aa0.75□□□□□ -2.29
KDM3A-213ENST00000488971 FAM186AA6NE01 2351 aa0.75□□□□□ -2.29
KDM3A-213ENST00000488971 LOC400499M0QZD8 3231 aa0.75□□□□□ -2.29
KDM3A-213ENST00000488971 TEX15Q9BXT5 2789 aa0.74□□□□□ -2.29
KDM3A-213ENST00000488971 SACSQ9NZJ4 4579 aa0.74□□□□□ -2.29
KDM3A-213ENST00000488971 SETXQ7Z333 2677 aaKnown RBP0.74□□□□□ -2.29
KDM3A-213ENST00000488971 PTPN13Q12923 2485 aa0.74□□□□□ -2.29
KDM3A-213ENST00000488971 USP9XQ93008 2570 aaPredicted RBP0.74□□□□□ -2.29
KDM3A-213ENST00000488971 SETD2Q9BYW2 2564 aaPredicted RBP0.74□□□□□ -2.29
KDM3A-213ENST00000488971 DNAH3Q8TD57 4116 aa0.73□□□□□ -2.29
KDM3A-213ENST00000488971 GPR98Q8WXG9 6306 aa0.73□□□□□ -2.29
KDM3A-213ENST00000488971 SPG11Q96JI7 2443 aa0.73□□□□□ -2.29
KDM3A-213ENST00000488971 TGP01266 2768 aa0.73□□□□□ -2.29
KDM3A-213ENST00000488971 KRTAP8-1Q8IUC2 63 aa0.73□□□□□ -2.29
KDM3A-213ENST00000488971 TACC2O95359 2948 aa0.73□□□□□ -2.29
KDM3A-213ENST00000488971 ZFYVE26Q68DK2 2539 aa0.73□□□□□ -2.29
KDM3A-213ENST00000488971 USP34Q70CQ2 3546 aa0.73□□□□□ -2.29
KDM3A-213ENST00000488971 RIF1Q5UIP0 2472 aaKnown RBP0.73□□□□□ -2.29
KDM3A-213ENST00000488971 LAMA3Q16787 3333 aa0.72□□□□□ -2.29
KDM3A-213ENST00000488971 UTP20O75691 2785 aaKnown RBP0.72□□□□□ -2.29
KDM3A-213ENST00000488971 DNAH1Q9P2D7 4330 aa0.71□□□□□ -2.3
KDM3A-213ENST00000488971 SONP18583 2426 aaKnown RBP0.71□□□□□ -2.3
KDM3A-213ENST00000488971 MUC3AQ02505 3323 aa0.71□□□□□ -2.3
KDM3A-213ENST00000488971 PKD1L1Q8TDX9 2849 aa0.71□□□□□ -2.3
KDM3A-213ENST00000488971 LRRK2Q5S007 2527 aa0.71□□□□□ -2.3
KDM3A-213ENST00000488971 CSMD1Q96PZ7 3565 aa0.71□□□□□ -2.3
KDM3A-213ENST00000488971 VCANP13611 3396 aa0.7□□□□□ -2.3
KDM3A-213ENST00000488971 LAMA5O15230 3695 aa0.7□□□□□ -2.3
KDM3A-213ENST00000488971 TEP1Q99973 2627 aaKnown RBP0.7□□□□□ -2.3
KDM3A-213ENST00000488971 ANK3Q12955 4377 aaKnown RBP0.7□□□□□ -2.3
KDM3A-213ENST00000488971 MXRA5Q9NR99 2828 aa0.7□□□□□ -2.3
KDM3A-213ENST00000488971 CFAP46Q8IYW2 2715 aa0.69□□□□□ -2.3
KDM3A-213ENST00000488971 UBR4Q5T4S7 5183 aa0.69□□□□□ -2.3
KDM3A-213ENST00000488971 MAST4O15021 2626 aa0.69□□□□□ -2.3
KDM3A-213ENST00000488971 DNAH17Q9UFH2 4485 aa0.69□□□□□ -2.3
KDM3A-213ENST00000488971 HECTD4Q9Y4D8 3996 aa0.69□□□□□ -2.3
KDM3A-213ENST00000488971 ZANQ9Y493 2812 aa0.69□□□□□ -2.3
KDM3A-213ENST00000488971 BRCA2P51587 3418 aa0.68□□□□□ -2.3
KDM3A-213ENST00000488971 FLNBO75369 2602 aaKnown RBP0.68□□□□□ -2.3
KDM3A-213ENST00000488971 PKD1P98161 4303 aa0.68□□□□□ -2.3
KDM3A-213ENST00000488971 ACANP16112 2415 aa0.68□□□□□ -2.3
KDM3A-213ENST00000488971 CENPEQ02224 2701 aa0.68□□□□□ -2.3
KDM3A-213ENST00000488971 ITPR2Q14571 2701 aa0.68□□□□□ -2.3
KDM3A-213ENST00000488971 GCN1Q92616 2671 aaKnown RBP0.68□□□□□ -2.3
KDM3A-213ENST00000488971 DNAH10Q8IVF4 4471 aa0.68□□□□□ -2.3
KDM3A-213ENST00000488971 DNAH9Q9NYC9 4486 aa0.68□□□□□ -2.3
KDM3A-213ENST00000488971 ADGRG4Q8IZF6 3080 aa0.68□□□□□ -2.3
KDM3A-213ENST00000488971 WDFY3Q8IZQ1 3526 aa0.68□□□□□ -2.3
KDM3A-213ENST00000488971 EPG5Q9HCE0 2579 aa0.68□□□□□ -2.3
KDM3A-213ENST00000488971 DNAH2Q9P225 4427 aa0.68□□□□□ -2.3
KDM3A-213ENST00000488971 NBEAL1Q6ZS30 2694 aa0.68□□□□□ -2.3
KDM3A-213ENST00000488971 SPENQ96T58 3664 aaKnown RBP0.68□□□□□ -2.3
KDM3A-213ENST00000488971 TLN1Q9Y490 2541 aaKnown RBP0.67□□□□□ -2.3
KDM3A-213ENST00000488971 HRNRQ86YZ3 2850 aaPredicted RBP0.67□□□□□ -2.3
KDM3A-213ENST00000488971 CMYA5Q8N3K9 4069 aa0.67□□□□□ -2.3
KDM3A-213ENST00000488971 DYNC2H1Q8NCM8 4307 aaKnown RBP0.67□□□□□ -2.3
KDM3A-213ENST00000488971 AHNAK2Q8IVF2 5795 aa0.67□□□□□ -2.3
KDM3A-213ENST00000488971 DNAH7Q8WXX0 4024 aa0.67□□□□□ -2.3
KDM3A-213ENST00000488971 HIVEP1P15822 2718 aa0.66□□□□□ -2.3
KDM3A-213ENST00000488971 FLNCQ14315 2725 aa0.66□□□□□ -2.3
KDM3A-213ENST00000488971 STAB2Q8WWQ8 2551 aa0.66□□□□□ -2.3
KDM3A-213ENST00000488971 STAB1Q9NY15 2570 aa0.66□□□□□ -2.3
KDM3A-213ENST00000488971 ANKRD11Q6UB99 2663 aaPredicted RBP0.66□□□□□ -2.3
KDM3A-213ENST00000488971 NBEAL2Q6ZNJ1 2754 aa0.66□□□□□ -2.3
KDM3A-213ENST00000488971 ASPMQ8IZT6 3477 aa0.66□□□□□ -2.3
KDM3A-213ENST00000488971 SMR3BP02814 79 aaPredicted RBP0.66□□□□□ -2.3
KDM3A-213ENST00000488971 LPAP08519 4548 aa0.66□□□□□ -2.3
KDM3A-213ENST00000488971 DNAH14Q0VDD8 3507 aa0.66□□□□□ -2.3
KDM3A-213ENST00000488971 APOBP04114 4563 aaKnown RBP0.66□□□□□ -2.3
KDM3A-213ENST00000488971 CSMD2Q7Z408 3487 aa0.65□□□□□ -2.3
KDM3A-213ENST00000488971 SMG1Q96Q15 3661 aaKnown RBP0.65□□□□□ -2.31
KDM3A-213ENST00000488971 FAT3Q8TDW7 4589 aa0.65□□□□□ -2.31
KDM3A-213ENST00000488971 PKHD1L1Q86WI1 4243 aa0.65□□□□□ -2.31
KDM3A-213ENST00000488971 MTORP42345 2549 aa0.65□□□□□ -2.31
KDM3A-213ENST00000488971 SPRR2DP22532 72 aa0.65□□□□□ -2.31
KDM3A-213ENST00000488971 TLN2Q9Y4G6 2542 aa0.65□□□□□ -2.31
KDM3A-213ENST00000488971 TRRAPQ9Y4A5 3859 aa0.64□□□□□ -2.31
KDM3A-213ENST00000488971 SPTAN1Q13813 2472 aaKnown RBP0.64□□□□□ -2.31
KDM3A-213ENST00000488971 DOPEY1Q5JWR5 2465 aa0.64□□□□□ -2.31
KDM3A-213ENST00000488971 TENM3Q9P273 2699 aa0.64□□□□□ -2.31
KDM3A-213ENST00000488971 KIAA1109Q2LD37 5005 aa0.64□□□□□ -2.31
KDM3A-213ENST00000488971 MYO9AB2RTY4 2548 aa0.64□□□□□ -2.31
KDM3A-213ENST00000488971 NSD1Q96L73 2696 aaPredicted RBP0.64□□□□□ -2.31
KDM3A-213ENST00000488971 FLGP20930 4061 aaPredicted RBP0.64□□□□□ -2.31
KDM3A-213ENST00000488971 DNAH6Q9C0G6 4158 aa0.64□□□□□ -2.31
KDM3A-213ENST00000488971 LRP1Q07954 4544 aaKnown RBP0.64□□□□□ -2.31
KDM3A-213ENST00000488971 PCLOQ9Y6V0 5065 aa0.64□□□□□ -2.31
KDM3A-213ENST00000488971 FASNP49327 2511 aaKnown RBP0.63□□□□□ -2.31
KDM3A-213ENST00000488971 CDH23Q9H251 3354 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms