RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 DNAH3Q8TD57 4116 aa2.08□□□□□ -2.08
SRRM1-215ENST00000488317 MGAM2Q2M2H8 2515 aa2.08□□□□□ -2.08
SRRM1-215ENST00000488317 NUPR2A6NF83 97 aa2.08□□□□□ -2.08
SRRM1-215ENST00000488317 K7EIL1 84 aa2.08□□□□□ -2.08
SRRM1-215ENST00000488317 DNAH1Q9P2D7 4330 aa2.08□□□□□ -2.08
SRRM1-215ENST00000488317 A0A1B0GU69 56 aa2.07□□□□□ -2.08
SRRM1-215ENST00000488317 SPATA8Q6RVD6 105 aa2.07□□□□□ -2.08
SRRM1-215ENST00000488317 SSBP3-AS1Q7Z2R9 100 aa2.07□□□□□ -2.08
SRRM1-215ENST00000488317 ALMS1Q8TCU4 4167 aa2.07□□□□□ -2.08
SRRM1-215ENST00000488317 UQCR11O14957 56 aa2.06□□□□□ -2.08
SRRM1-215ENST00000488317 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
SRRM1-215ENST00000488317 PRO2289Q9P1D8 64 aa2.06□□□□□ -2.08
SRRM1-215ENST00000488317 FBN1P35555 2871 aaKnown RBP2.06□□□□□ -2.08
SRRM1-215ENST00000488317 COL7A1Q02388 2944 aa2.06□□□□□ -2.08
SRRM1-215ENST00000488317 TRRAPQ9Y4A5 3859 aa2.05□□□□□ -2.08
SRRM1-215ENST00000488317 A0A087WTM6 91 aa2.04□□□□□ -2.08
SRRM1-215ENST00000488317 KRTAP12-3P60328 96 aa2.04□□□□□ -2.08
SRRM1-215ENST00000488317 MIR22HGQ0VDD5 57 aa2.04□□□□□ -2.08
SRRM1-215ENST00000488317 LINC01554Q52M75 96 aa2.04□□□□□ -2.08
SRRM1-215ENST00000488317 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
SRRM1-215ENST00000488317 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
SRRM1-215ENST00000488317 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
SRRM1-215ENST00000488317 SPINK6Q6UWN8 80 aa2.03□□□□□ -2.08
SRRM1-215ENST00000488317 RETNLBQ9BQ08 111 aa2.03□□□□□ -2.08
SRRM1-215ENST00000488317 ANK2Q01484 3957 aa2.02□□□□□ -2.09
SRRM1-215ENST00000488317 CMYA5Q8N3K9 4069 aa2.01□□□□□ -2.09
SRRM1-215ENST00000488317 HUWE1Q7Z6Z7 4374 aaKnown RBP2.01□□□□□ -2.09
SRRM1-215ENST00000488317 TPRXLQ17RH7 258 aa2.01□□□□□ -2.09
SRRM1-215ENST00000488317 MEGF8Q7Z7M0 2845 aa2.01□□□□□ -2.09
SRRM1-215ENST00000488317 DYNC2H1Q8NCM8 4307 aaKnown RBP2.01□□□□□ -2.09
SRRM1-215ENST00000488317 LY6G6CO95867 125 aa2□□□□□ -2.09
SRRM1-215ENST00000488317 TGP01266 2768 aa2□□□□□ -2.09
SRRM1-215ENST00000488317 RPS29P62273 56 aaKnown RBP1.99□□□□□ -2.09
SRRM1-215ENST00000488317 DNAH10Q8IVF4 4471 aa1.99□□□□□ -2.09
SRRM1-215ENST00000488317 C1orf134Q5TEV5 83 aa1.98□□□□□ -2.09
SRRM1-215ENST00000488317 DNAH9Q9NYC9 4486 aa1.98□□□□□ -2.09
SRRM1-215ENST00000488317 VPS13DQ5THJ4 4388 aa1.97□□□□□ -2.09
SRRM1-215ENST00000488317 FBN3Q75N90 2809 aa1.97□□□□□ -2.09
SRRM1-215ENST00000488317 DNAH17Q9UFH2 4485 aa1.97□□□□□ -2.09
SRRM1-215ENST00000488317 SPINK1P00995 79 aa1.97□□□□□ -2.09
SRRM1-215ENST00000488317 KRTAP12-1P59990 96 aa1.97□□□□□ -2.09
SRRM1-215ENST00000488317 CSAG1Q6PB30 78 aa1.97□□□□□ -2.09
SRRM1-215ENST00000488317 Q6ZSA8 131 aa1.97□□□□□ -2.09
SRRM1-215ENST00000488317 DNAH8Q96JB1 4490 aa1.95□□□□□ -2.1
SRRM1-215ENST00000488317 H0YAA0 97 aa1.94□□□□□ -2.1
SRRM1-215ENST00000488317 DNAH6Q9C0G6 4158 aa1.94□□□□□ -2.1
SRRM1-215ENST00000488317 HECTD4Q9Y4D8 3996 aa1.94□□□□□ -2.1
SRRM1-215ENST00000488317 PRKDCP78527 4128 aaKnown RBP1.93□□□□□ -2.1
SRRM1-215ENST00000488317 LYSTQ99698 3801 aa1.93□□□□□ -2.1
SRRM1-215ENST00000488317 KRTAP13-4Q3LI77 160 aa1.93□□□□□ -2.1
SRRM1-215ENST00000488317 H1FX-AS1Q4G0G2 97 aa1.93□□□□□ -2.1
SRRM1-215ENST00000488317 CSMD3Q7Z407 3707 aa1.93□□□□□ -2.1
SRRM1-215ENST00000488317 PLECQ15149 4684 aaKnown RBP1.91□□□□□ -2.1
SRRM1-215ENST00000488317 DNAH7Q8WXX0 4024 aa1.91□□□□□ -2.1
SRRM1-215ENST00000488317 ROMO1P60602 79 aa1.9□□□□□ -2.11
SRRM1-215ENST00000488317 STARD9Q9P2P6 4700 aa1.9□□□□□ -2.11
SRRM1-215ENST00000488317 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
SRRM1-215ENST00000488317 COX6B2Q6YFQ2 88 aa1.89□□□□□ -2.11
SRRM1-215ENST00000488317 DNAH2Q9P225 4427 aa1.88□□□□□ -2.11
SRRM1-215ENST00000488317 DNAH11Q96DT5 4516 aa1.87□□□□□ -2.11
SRRM1-215ENST00000488317 FLG2Q5D862 2391 aaPredicted RBP1.87□□□□□ -2.11
SRRM1-215ENST00000488317 FRAS1Q86XX4 4008 aa1.86□□□□□ -2.11
SRRM1-215ENST00000488317 RPL37P61927 97 aaKnown RBP1.86□□□□□ -2.11
SRRM1-215ENST00000488317 DMBT1Q9UGM3 2413 aaPredicted RBP1.85□□□□□ -2.11
SRRM1-215ENST00000488317 DNAH5Q8TE73 4624 aa1.83□□□□□ -2.12
SRRM1-215ENST00000488317 C9orf92A6NGG3 77 aa1.83□□□□□ -2.12
SRRM1-215ENST00000488317 SACSQ9NZJ4 4579 aa1.82□□□□□ -2.12
SRRM1-215ENST00000488317 KMT2AQ03164 3969 aa1.82□□□□□ -2.12
SRRM1-215ENST00000488317 PKD1P98161 4303 aa1.81□□□□□ -2.12
SRRM1-215ENST00000488317 KRTAP10-4P60372 401 aaPredicted RBP1.81□□□□□ -2.12
SRRM1-215ENST00000488317 S4R3F8 94 aa1.81□□□□□ -2.12
SRRM1-215ENST00000488317 VPS13BQ7Z7G8 4022 aa1.81□□□□□ -2.12
SRRM1-215ENST00000488317 LRP1BQ9NZR2 4599 aa1.8□□□□□ -2.12
SRRM1-215ENST00000488317 PKHD1L1Q86WI1 4243 aa1.79□□□□□ -2.12
SRRM1-215ENST00000488317 CRIPTQ9P021 101 aa1.79□□□□□ -2.12
SRRM1-215ENST00000488317 M0QZ58 72 aa1.78□□□□□ -2.12
SRRM1-215ENST00000488317 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
SRRM1-215ENST00000488317 PKHD1P08F94 4074 aa1.78□□□□□ -2.12
SRRM1-215ENST00000488317 A0A0D9SG42 100 aa1.77□□□□□ -2.13
SRRM1-215ENST00000488317 FAT2Q9NYQ8 4349 aa1.77□□□□□ -2.13
SRRM1-215ENST00000488317 APOBP04114 4563 aaKnown RBP1.74□□□□□ -2.13
SRRM1-215ENST00000488317 SMR3BP02814 79 aaPredicted RBP1.74□□□□□ -2.13
SRRM1-215ENST00000488317 TNXBP22105 4242 aa1.73□□□□□ -2.13
SRRM1-215ENST00000488317 KRTAP21-3Q3LHN1 58 aa1.73□□□□□ -2.13
SRRM1-215ENST00000488317 C10orf95Q9H7T3 257 aa1.73□□□□□ -2.13
SRRM1-215ENST00000488317 DYNC1H1Q14204 4646 aaKnown RBP1.72□□□□□ -2.13
SRRM1-215ENST00000488317 HYDINQ4G0P3 5121 aa1.71□□□□□ -2.14
SRRM1-215ENST00000488317 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
SRRM1-215ENST00000488317 LRP1Q07954 4544 aaKnown RBP1.68□□□□□ -2.14
SRRM1-215ENST00000488317 FAT1Q14517 4588 aa1.68□□□□□ -2.14
SRRM1-215ENST00000488317 Q5VSD8 79 aa1.68□□□□□ -2.14
SRRM1-215ENST00000488317 FAT3Q8TDW7 4589 aa1.67□□□□□ -2.14
SRRM1-215ENST00000488317 DNHD1Q96M86 4753 aa1.67□□□□□ -2.14
SRRM1-215ENST00000488317 MT1HL1P0DM35 61 aa1.66□□□□□ -2.14
SRRM1-215ENST00000488317 PLAC4Q8WY50 150 aa1.66□□□□□ -2.14
SRRM1-215ENST00000488317 HSPG2P98160 4391 aa1.66□□□□□ -2.14
SRRM1-215ENST00000488317 RYR2Q92736 4967 aa1.64□□□□□ -2.15
SRRM1-215ENST00000488317 MYCBP2O75592 4640 aa1.62□□□□□ -2.15
SRRM1-215ENST00000488317 RYR1P21817 5038 aa1.61□□□□□ -2.15
SRRM1-215ENST00000488317 TNP1P09430 55 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms