RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
SGSM3-209ENST00000478085 ALMS1Q8TCU4 4167 aa5.86□□□□□ -1.47
SGSM3-209ENST00000478085 LRP1BQ9NZR2 4599 aa5.85□□□□□ -1.47
SGSM3-209ENST00000478085 HYDINQ4G0P3 5121 aa5.84□□□□□ -1.47
SGSM3-209ENST00000478085 KIAA1109Q2LD37 5005 aa5.83□□□□□ -1.48
SGSM3-209ENST00000478085 DNAH17Q9UFH2 4485 aa5.81□□□□□ -1.48
SGSM3-209ENST00000478085 KMT2CQ8NEZ4 4911 aaKnown RBP5.79□□□□□ -1.48
SGSM3-209ENST00000478085 LUZP6Q538Z0 58 aa5.79□□□□□ -1.48
SGSM3-209ENST00000478085 RYR1P21817 5038 aa5.78□□□□□ -1.48
SGSM3-209ENST00000478085 DNAH2Q9P225 4427 aa5.78□□□□□ -1.48
SGSM3-209ENST00000478085 DNAH6Q9C0G6 4158 aa5.76□□□□□ -1.49
SGSM3-209ENST00000478085 NDUFAF8A1L188 74 aa5.75□□□□□ -1.49
SGSM3-209ENST00000478085 FRAS1Q86XX4 4008 aa5.75□□□□□ -1.49
SGSM3-209ENST00000478085 DNAH8Q96JB1 4490 aa5.75□□□□□ -1.49
SGSM3-209ENST00000478085 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.49
SGSM3-209ENST00000478085 RYR3Q15413 4870 aa5.71□□□□□ -1.5
SGSM3-209ENST00000478085 PKHD1P08F94 4074 aa5.7□□□□□ -1.5
SGSM3-209ENST00000478085 TNP1P09430 55 aa5.7□□□□□ -1.5
SGSM3-209ENST00000478085 DYNC2H1Q8NCM8 4307 aaKnown RBP5.68□□□□□ -1.5
SGSM3-209ENST00000478085 SACSQ9NZJ4 4579 aa5.65□□□□□ -1.5
SGSM3-209ENST00000478085 MYCBP2O75592 4640 aa5.62□□□□□ -1.51
SGSM3-209ENST00000478085 FAT2Q9NYQ8 4349 aa5.62□□□□□ -1.51
SGSM3-209ENST00000478085 KRTAP10-6P60371 365 aaPredicted RBP5.62□□□□□ -1.51
SGSM3-209ENST00000478085 A0A0A0MQY5 61 aa5.61□□□□□ -1.51
SGSM3-209ENST00000478085 HECTD4Q9Y4D8 3996 aa5.6□□□□□ -1.51
SGSM3-209ENST00000478085 VPS13BQ7Z7G8 4022 aa5.6□□□□□ -1.51
SGSM3-209ENST00000478085 APOBP04114 4563 aaKnown RBP5.6□□□□□ -1.51
SGSM3-209ENST00000478085 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
SGSM3-209ENST00000478085 KRTAP17-1Q9BYP8 105 aa5.6□□□□□ -1.51
SGSM3-209ENST00000478085 KRTAP3-3Q9BYR6 98 aa5.59□□□□□ -1.51
SGSM3-209ENST00000478085 KRTAP13-4Q3LI77 160 aa5.58□□□□□ -1.52
SGSM3-209ENST00000478085 LRP1Q07954 4544 aaKnown RBP5.57□□□□□ -1.52
SGSM3-209ENST00000478085 FAT3Q8TDW7 4589 aa5.54□□□□□ -1.52
SGSM3-209ENST00000478085 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
SGSM3-209ENST00000478085 RYR2Q92736 4967 aa5.53□□□□□ -1.52
SGSM3-209ENST00000478085 KRTAP3-2Q9BYR7 98 aa5.5□□□□□ -1.53
SGSM3-209ENST00000478085 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
SGSM3-209ENST00000478085 KRTAP4-1Q9BYQ7 146 aa5.46□□□□□ -1.54
SGSM3-209ENST00000478085 PRO2289Q9P1D8 64 aa5.46□□□□□ -1.54
SGSM3-209ENST00000478085 EPPK1P58107 5090 aaKnown RBP5.45□□□□□ -1.54
SGSM3-209ENST00000478085 HERC2O95714 4834 aa5.42□□□□□ -1.54
SGSM3-209ENST00000478085 PKD1P98161 4303 aa5.4□□□□□ -1.54
SGSM3-209ENST00000478085 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
SGSM3-209ENST00000478085 LORP23490 312 aaPredicted RBP5.34□□□□□ -1.55
SGSM3-209ENST00000478085 LRP2P98164 4655 aa5.31□□□□□ -1.56
SGSM3-209ENST00000478085 HSPG2P98160 4391 aa5.28□□□□□ -1.56
SGSM3-209ENST00000478085 BIRC6Q9NR09 4857 aa5.24□□□□□ -1.57
SGSM3-209ENST00000478085 MT1HP80294 61 aa5.17□□□□□ -1.58
SGSM3-209ENST00000478085 ABCA13Q86UQ4 5058 aa5.16□□□□□ -1.58
SGSM3-209ENST00000478085 LPAP08519 4548 aa5.11□□□□□ -1.59
SGSM3-209ENST00000478085 HERC1Q15751 4861 aa5.08□□□□□ -1.6
SGSM3-209ENST00000478085 MT2AP02795 61 aa5.06□□□□□ -1.6
SGSM3-209ENST00000478085 MUC2Q02817 5179 aa5.04□□□□□ -1.6
SGSM3-209ENST00000478085 PKHD1L1Q86WI1 4243 aa5.04□□□□□ -1.6
SGSM3-209ENST00000478085 PCLOQ9Y6V0 5065 aa5.04□□□□□ -1.6
SGSM3-209ENST00000478085 MT1FP04733 61 aa5.01□□□□□ -1.61
SGSM3-209ENST00000478085 KRTAP10-12P60413 245 aa5□□□□□ -1.61
SGSM3-209ENST00000478085 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
SGSM3-209ENST00000478085 TNXBP22105 4242 aa4.94□□□□□ -1.62
SGSM3-209ENST00000478085 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
SGSM3-209ENST00000478085 SPRR2GQ9BYE4 73 aa4.92□□□□□ -1.62
SGSM3-209ENST00000478085 UBR4Q5T4S7 5183 aa4.9□□□□□ -1.63
SGSM3-209ENST00000478085 LCE3AQ5TA76 89 aa4.89□□□□□ -1.63
SGSM3-209ENST00000478085 LCE2CQ5TA81 110 aa4.86□□□□□ -1.63
SGSM3-209ENST00000478085 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
SGSM3-209ENST00000478085 KRTAP19-1Q8IUB9 90 aa4.82□□□□□ -1.64
SGSM3-209ENST00000478085 FAT4Q6V0I7 4981 aa4.8□□□□□ -1.64
SGSM3-209ENST00000478085 KRTAP9-8Q9BYQ0 159 aa4.77□□□□□ -1.65
SGSM3-209ENST00000478085 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
SGSM3-209ENST00000478085 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
SGSM3-209ENST00000478085 FSIP2Q5CZC0 6907 aa4.71□□□□□ -1.66
SGSM3-209ENST00000478085 INE1O15225 51 aa4.7□□□□□ -1.66
SGSM3-209ENST00000478085 KRTAP8-1Q8IUC2 63 aa4.7□□□□□ -1.66
SGSM3-209ENST00000478085 MUC17Q685J3 4493 aa4.66□□□□□ -1.66
SGSM3-209ENST00000478085 KRTAP19-8Q3LI54 63 aa4.66□□□□□ -1.66
SGSM3-209ENST00000478085 HMCN2Q8NDA2 5059 aa4.65□□□□□ -1.67
SGSM3-209ENST00000478085 MT1BP07438 61 aa4.62□□□□□ -1.67
SGSM3-209ENST00000478085 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
SGSM3-209ENST00000478085 FLGP20930 4061 aaPredicted RBP4.59□□□□□ -1.67
SGSM3-209ENST00000478085 KRTAP10-7P60409 375 aaPredicted RBP4.57□□□□□ -1.68
SGSM3-209ENST00000478085 MT1XP80297 61 aa4.56□□□□□ -1.68
SGSM3-209ENST00000478085 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
SGSM3-209ENST00000478085 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
SGSM3-209ENST00000478085 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
SGSM3-209ENST00000478085 LCE2BO14633 110 aa4.5□□□□□ -1.69
SGSM3-209ENST00000478085 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
SGSM3-209ENST00000478085 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
SGSM3-209ENST00000478085 KRTAP4-8Q9BYQ9 185 aa4.44□□□□□ -1.7
SGSM3-209ENST00000478085 LCE2AQ5TA79 106 aaPredicted RBP4.4□□□□□ -1.71
SGSM3-209ENST00000478085 USH2AO75445 5202 aa4.34□□□□□ -1.71
SGSM3-209ENST00000478085 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
SGSM3-209ENST00000478085 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
SGSM3-209ENST00000478085 SPRR2EP22531 72 aa4.16□□□□□ -1.74
SGSM3-209ENST00000478085 SPRR2BP35325 72 aa4.16□□□□□ -1.74
SGSM3-209ENST00000478085 SPRR2AP35326 72 aa4.16□□□□□ -1.74
SGSM3-209ENST00000478085 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
SGSM3-209ENST00000478085 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
SGSM3-209ENST00000478085 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
SGSM3-209ENST00000478085 KRTAP9-6A0A140TA67 174 aa4.1□□□□□ -1.75
SGSM3-209ENST00000478085 MT1GP13640 62 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms