RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 COL12A1Q99715 3063 aa0.49□□□□□ -2.33
SOX2-OT-207ENST00000476964 NBEAL2Q6ZNJ1 2754 aa0.49□□□□□ -2.33
SOX2-OT-207ENST00000476964 PKD1P98161 4303 aa0.48□□□□□ -2.33
SOX2-OT-207ENST00000476964 WDR87Q6ZQQ6 2873 aa0.48□□□□□ -2.33
SOX2-OT-207ENST00000476964 SPENQ96T58 3664 aaKnown RBP0.48□□□□□ -2.33
SOX2-OT-207ENST00000476964 DNAH7Q8WXX0 4024 aa0.48□□□□□ -2.33
SOX2-OT-207ENST00000476964 TEP1Q99973 2627 aaKnown RBP0.48□□□□□ -2.33
SOX2-OT-207ENST00000476964 NBPF19A0A087WUL8 3843 aa0.48□□□□□ -2.33
SOX2-OT-207ENST00000476964 HTN3P15516 51 aa0.48□□□□□ -2.33
SOX2-OT-207ENST00000476964 COX14Q96I36 57 aa0.48□□□□□ -2.33
SOX2-OT-207ENST00000476964 DCHS2Q6V1P9 2916 aa0.48□□□□□ -2.33
SOX2-OT-207ENST00000476964 HIVEP1P15822 2718 aa0.48□□□□□ -2.33
SOX2-OT-207ENST00000476964 DNAH8Q96JB1 4490 aa0.47□□□□□ -2.33
SOX2-OT-207ENST00000476964 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
SOX2-OT-207ENST00000476964 SMR3BP02814 79 aaPredicted RBP0.47□□□□□ -2.33
SOX2-OT-207ENST00000476964 ZANQ9Y493 2812 aa0.47□□□□□ -2.33
SOX2-OT-207ENST00000476964 RELNP78509 3460 aa0.47□□□□□ -2.33
SOX2-OT-207ENST00000476964 HECTD4Q9Y4D8 3996 aa0.47□□□□□ -2.33
SOX2-OT-207ENST00000476964 AKAP9Q99996 3911 aa0.46□□□□□ -2.34
SOX2-OT-207ENST00000476964 DNAH6Q9C0G6 4158 aa0.46□□□□□ -2.34
SOX2-OT-207ENST00000476964 FAT4Q6V0I7 4981 aa0.46□□□□□ -2.34
SOX2-OT-207ENST00000476964 FLGP20930 4061 aaPredicted RBP0.46□□□□□ -2.34
SOX2-OT-207ENST00000476964 USP9XQ93008 2570 aaPredicted RBP0.46□□□□□ -2.34
SOX2-OT-207ENST00000476964 RPS29P62273 56 aaKnown RBP0.46□□□□□ -2.34
SOX2-OT-207ENST00000476964 Q9Y3F1 56 aa0.46□□□□□ -2.34
SOX2-OT-207ENST00000476964 TGP01266 2768 aa0.46□□□□□ -2.34
SOX2-OT-207ENST00000476964 LRP1Q07954 4544 aaKnown RBP0.46□□□□□ -2.34
SOX2-OT-207ENST00000476964 FASNP49327 2511 aaKnown RBP0.45□□□□□ -2.34
SOX2-OT-207ENST00000476964 CFAP54Q96N23 3096 aa0.45□□□□□ -2.34
SOX2-OT-207ENST00000476964 ITPR1Q14643 2758 aa0.45□□□□□ -2.34
SOX2-OT-207ENST00000476964 KALRNO60229 2985 aa0.45□□□□□ -2.34
SOX2-OT-207ENST00000476964 MT1AP04731 61 aa0.45□□□□□ -2.34
SOX2-OT-207ENST00000476964 SPRR2FQ96RM1 72 aa0.45□□□□□ -2.34
SOX2-OT-207ENST00000476964 HSPG2P98160 4391 aa0.45□□□□□ -2.34
SOX2-OT-207ENST00000476964 NIPBLQ6KC79 2804 aaeCLIP0.45□□□□□ -2.34
SOX2-OT-207ENST00000476964 MYO18BQ8IUG5 2567 aa0.45□□□□□ -2.34
SOX2-OT-207ENST00000476964 DNAH1Q9P2D7 4330 aa0.45□□□□□ -2.34
SOX2-OT-207ENST00000476964 TRIOO75962 3097 aa0.44□□□□□ -2.34
SOX2-OT-207ENST00000476964 FLNAP21333 2647 aaKnown RBP0.44□□□□□ -2.34
SOX2-OT-207ENST00000476964 SPRR2EP22531 72 aa0.44□□□□□ -2.34
SOX2-OT-207ENST00000476964 HRNRQ86YZ3 2850 aaPredicted RBP0.43□□□□□ -2.34
SOX2-OT-207ENST00000476964 SPTAN1Q13813 2472 aaKnown RBP0.43□□□□□ -2.34
SOX2-OT-207ENST00000476964 LAMA1P25391 3075 aa0.43□□□□□ -2.34
SOX2-OT-207ENST00000476964 KRTAP19-5Q3LI72 72 aa0.43□□□□□ -2.34
SOX2-OT-207ENST00000476964 FRYLO94915 3013 aa0.43□□□□□ -2.34
SOX2-OT-207ENST00000476964 MGAM2Q2M2H8 2515 aa0.43□□□□□ -2.34
SOX2-OT-207ENST00000476964 LAMA5O15230 3695 aa0.43□□□□□ -2.34
SOX2-OT-207ENST00000476964 LAMA3Q16787 3333 aa0.43□□□□□ -2.34
SOX2-OT-207ENST00000476964 LPAP08519 4548 aa0.43□□□□□ -2.34
SOX2-OT-207ENST00000476964 MXRA5Q9NR99 2828 aa0.42□□□□□ -2.34
SOX2-OT-207ENST00000476964 AHNAKQ09666 5890 aaKnown RBP0.42□□□□□ -2.34
SOX2-OT-207ENST00000476964 NBEAQ8NFP9 2946 aa0.42□□□□□ -2.34
SOX2-OT-207ENST00000476964 CMYA5Q8N3K9 4069 aa0.42□□□□□ -2.34
SOX2-OT-207ENST00000476964 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
SOX2-OT-207ENST00000476964 DNAH10Q8IVF4 4471 aa0.42□□□□□ -2.34
SOX2-OT-207ENST00000476964 DNAH9Q9NYC9 4486 aa0.42□□□□□ -2.34
SOX2-OT-207ENST00000476964 DEFB4AO15263 64 aa0.41□□□□□ -2.34
SOX2-OT-207ENST00000476964 FAT3Q8TDW7 4589 aa0.41□□□□□ -2.34
SOX2-OT-207ENST00000476964 MAST4O15021 2626 aa0.41□□□□□ -2.34
SOX2-OT-207ENST00000476964 DOPEY1Q5JWR5 2465 aa0.41□□□□□ -2.34
SOX2-OT-207ENST00000476964 APOBP04114 4563 aaKnown RBP0.41□□□□□ -2.34
SOX2-OT-207ENST00000476964 HTTP42858 3142 aa0.4□□□□□ -2.34
SOX2-OT-207ENST00000476964 CSMD1Q96PZ7 3565 aa0.4□□□□□ -2.34
SOX2-OT-207ENST00000476964 DMXL2Q8TDJ6 3036 aa0.4□□□□□ -2.35
SOX2-OT-207ENST00000476964 LRBAP50851 2863 aa0.4□□□□□ -2.35
SOX2-OT-207ENST00000476964 CFAP46Q8IYW2 2715 aa0.4□□□□□ -2.35
SOX2-OT-207ENST00000476964 COL6A3P12111 3177 aa0.4□□□□□ -2.35
SOX2-OT-207ENST00000476964 TEX15Q9BXT5 2789 aa0.4□□□□□ -2.35
SOX2-OT-207ENST00000476964 PRUNE2Q8WUY3 3088 aa0.39□□□□□ -2.35
SOX2-OT-207ENST00000476964 PKHD1P08F94 4074 aa0.39□□□□□ -2.35
SOX2-OT-207ENST00000476964 LRP1BQ9NZR2 4599 aa0.38□□□□□ -2.35
SOX2-OT-207ENST00000476964 IGSF10Q6WRI0 2623 aa0.38□□□□□ -2.35
SOX2-OT-207ENST00000476964 C5orf42Q9H799 3197 aa0.38□□□□□ -2.35
SOX2-OT-207ENST00000476964 NBEAL1Q6ZS30 2694 aa0.38□□□□□ -2.35
SOX2-OT-207ENST00000476964 SVEP1Q4LDE5 3571 aa0.37□□□□□ -2.35
SOX2-OT-207ENST00000476964 DNAH12Q6ZR08 3092 aa0.37□□□□□ -2.35
SOX2-OT-207ENST00000476964 MAP1AP78559 2803 aaPredicted RBP0.37□□□□□ -2.35
SOX2-OT-207ENST00000476964 PLECQ15149 4684 aaKnown RBP0.37□□□□□ -2.35
SOX2-OT-207ENST00000476964 TLN1Q9Y490 2541 aaKnown RBP0.36□□□□□ -2.35
SOX2-OT-207ENST00000476964 ATMQ13315 3056 aa0.36□□□□□ -2.35
SOX2-OT-207ENST00000476964 SPTBN5Q9NRC6 3674 aaKnown RBP0.36□□□□□ -2.35
SOX2-OT-207ENST00000476964 FAT1Q14517 4588 aa0.35□□□□□ -2.35
SOX2-OT-207ENST00000476964 CENPEQ02224 2701 aa0.35□□□□□ -2.35
SOX2-OT-207ENST00000476964 ADGRG4Q8IZF6 3080 aa0.34□□□□□ -2.35
SOX2-OT-207ENST00000476964 BOD1L1Q8NFC6 3051 aa0.34□□□□□ -2.35
SOX2-OT-207ENST00000476964 HERC1Q15751 4861 aa0.34□□□□□ -2.36
SOX2-OT-207ENST00000476964 CEP295Q9C0D2 2601 aa0.34□□□□□ -2.36
SOX2-OT-207ENST00000476964 SZT2Q5T011 3432 aa0.34□□□□□ -2.36
SOX2-OT-207ENST00000476964 ITPR2Q14571 2701 aa0.34□□□□□ -2.36
SOX2-OT-207ENST00000476964 DCHS1Q96JQ0 3298 aa0.33□□□□□ -2.36
SOX2-OT-207ENST00000476964 FREM2Q5SZK8 3169 aa0.33□□□□□ -2.36
SOX2-OT-207ENST00000476964 XIRP2A4UGR9 3374 aa0.32□□□□□ -2.36
SOX2-OT-207ENST00000476964 TRRAPQ9Y4A5 3859 aa0.32□□□□□ -2.36
SOX2-OT-207ENST00000476964 HMCN2Q8NDA2 5059 aa0.32□□□□□ -2.36
SOX2-OT-207ENST00000476964 STAB2Q8WWQ8 2551 aa0.32□□□□□ -2.36
SOX2-OT-207ENST00000476964 DNAH17Q9UFH2 4485 aa0.32□□□□□ -2.36
SOX2-OT-207ENST00000476964 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
SOX2-OT-207ENST00000476964 MUC5ACP98088 5654 aa0.31□□□□□ -2.36
SOX2-OT-207ENST00000476964 SMG1Q96Q15 3661 aaKnown RBP0.31□□□□□ -2.36
SOX2-OT-207ENST00000476964 GPR98Q8WXG9 6306 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms