RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 A0A1B0GVY2 172 aa2.7□□□□□ -1.98
SPTLC3-205ENST00000476791 KRTAP10-12P60413 245 aa2.7□□□□□ -1.98
SPTLC3-205ENST00000476791 NOTCH3Q9UM47 2321 aa2.7□□□□□ -1.98
SPTLC3-205ENST00000476791 DYNC2H1Q8NCM8 4307 aaKnown RBP2.69□□□□□ -1.98
SPTLC3-205ENST00000476791 SONP18583 2426 aaKnown RBP2.68□□□□□ -1.98
SPTLC3-205ENST00000476791 RYR3Q15413 4870 aa2.67□□□□□ -1.98
SPTLC3-205ENST00000476791 PRO0255Q9UI72 69 aa2.67□□□□□ -1.98
SPTLC3-205ENST00000476791 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
SPTLC3-205ENST00000476791 TLN2Q9Y4G6 2542 aa2.66□□□□□ -1.98
SPTLC3-205ENST00000476791 DNAH1Q9P2D7 4330 aa2.66□□□□□ -1.98
SPTLC3-205ENST00000476791 MGAM2Q2M2H8 2515 aa2.66□□□□□ -1.98
SPTLC3-205ENST00000476791 CUBNO60494 3623 aa2.65□□□□□ -1.98
SPTLC3-205ENST00000476791 SVEP1Q4LDE5 3571 aa2.65□□□□□ -1.99
SPTLC3-205ENST00000476791 NOTCH1P46531 2555 aa2.64□□□□□ -1.99
SPTLC3-205ENST00000476791 COL7A1Q02388 2944 aa2.64□□□□□ -1.99
SPTLC3-205ENST00000476791 LYSTQ99698 3801 aa2.63□□□□□ -1.99
SPTLC3-205ENST00000476791 HERC2O95714 4834 aa2.62□□□□□ -1.99
SPTLC3-205ENST00000476791 SPINK6Q6UWN8 80 aa2.62□□□□□ -1.99
SPTLC3-205ENST00000476791 PKD1L1Q8TDX9 2849 aa2.62□□□□□ -1.99
SPTLC3-205ENST00000476791 KRTAP10-1P60331 282 aa2.62□□□□□ -1.99
SPTLC3-205ENST00000476791 ZNF469Q96JG9 3925 aaPredicted RBP2.62□□□□□ -1.99
SPTLC3-205ENST00000476791 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
SPTLC3-205ENST00000476791 NBEAL2Q6ZNJ1 2754 aa2.6□□□□□ -1.99
SPTLC3-205ENST00000476791 DNAH11Q96DT5 4516 aa2.6□□□□□ -1.99
SPTLC3-205ENST00000476791 KMT2CQ8NEZ4 4911 aaKnown RBP2.6□□□□□ -1.99
SPTLC3-205ENST00000476791 KRTAP5-9P26371 169 aa2.6□□□□□ -1.99
SPTLC3-205ENST00000476791 PRKDCP78527 4128 aaKnown RBP2.59□□□□□ -1.99
SPTLC3-205ENST00000476791 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -2
SPTLC3-205ENST00000476791 VPS13DQ5THJ4 4388 aa2.59□□□□□ -2
SPTLC3-205ENST00000476791 KRTAP10-3P60369 221 aa2.58□□□□□ -2
SPTLC3-205ENST00000476791 RYR2Q92736 4967 aa2.57□□□□□ -2
SPTLC3-205ENST00000476791 TRRAPQ9Y4A5 3859 aa2.56□□□□□ -2
SPTLC3-205ENST00000476791 TGP01266 2768 aa2.56□□□□□ -2
SPTLC3-205ENST00000476791 DNAH8Q96JB1 4490 aa2.55□□□□□ -2
SPTLC3-205ENST00000476791 MYCBP2O75592 4640 aa2.55□□□□□ -2
SPTLC3-205ENST00000476791 KRTAP1-4P0C5Y4 121 aa2.54□□□□□ -2
SPTLC3-205ENST00000476791 PCLOQ9Y6V0 5065 aa2.54□□□□□ -2
SPTLC3-205ENST00000476791 FRAS1Q86XX4 4008 aa2.54□□□□□ -2
SPTLC3-205ENST00000476791 H3BUX3 64 aa2.53□□□□□ -2
SPTLC3-205ENST00000476791 HRNRQ86YZ3 2850 aaPredicted RBP2.53□□□□□ -2
SPTLC3-205ENST00000476791 ZANQ9Y493 2812 aa2.52□□□□□ -2.01
SPTLC3-205ENST00000476791 SACSQ9NZJ4 4579 aa2.52□□□□□ -2.01
SPTLC3-205ENST00000476791 VPS13CQ709C8 3753 aa2.51□□□□□ -2.01
SPTLC3-205ENST00000476791 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
SPTLC3-205ENST00000476791 EPPK1P58107 5090 aaKnown RBP2.51□□□□□ -2.01
SPTLC3-205ENST00000476791 CMYA5Q8N3K9 4069 aa2.5□□□□□ -2.01
SPTLC3-205ENST00000476791 DNAH3Q8TD57 4116 aa2.5□□□□□ -2.01
SPTLC3-205ENST00000476791 Q5VSD8 79 aa2.49□□□□□ -2.01
SPTLC3-205ENST00000476791 DNAH9Q9NYC9 4486 aa2.48□□□□□ -2.01
SPTLC3-205ENST00000476791 TENM1Q9UKZ4 2725 aa2.48□□□□□ -2.01
SPTLC3-205ENST00000476791 TENM3Q9P273 2699 aa2.48□□□□□ -2.01
SPTLC3-205ENST00000476791 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
SPTLC3-205ENST00000476791 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
SPTLC3-205ENST00000476791 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
SPTLC3-205ENST00000476791 HYDINQ4G0P3 5121 aa2.45□□□□□ -2.02
SPTLC3-205ENST00000476791 KRTAP13-1Q8IUC0 172 aa2.44□□□□□ -2.02
SPTLC3-205ENST00000476791 DNAH7Q8WXX0 4024 aa2.42□□□□□ -2.02
SPTLC3-205ENST00000476791 DNAH6Q9C0G6 4158 aa2.42□□□□□ -2.02
SPTLC3-205ENST00000476791 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
SPTLC3-205ENST00000476791 DNAH10Q8IVF4 4471 aa2.41□□□□□ -2.02
SPTLC3-205ENST00000476791 DYNC1H1Q14204 4646 aaKnown RBP2.39□□□□□ -2.03
SPTLC3-205ENST00000476791 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
SPTLC3-205ENST00000476791 HECTD4Q9Y4D8 3996 aa2.38□□□□□ -2.03
SPTLC3-205ENST00000476791 PLECQ15149 4684 aaKnown RBP2.37□□□□□ -2.03
SPTLC3-205ENST00000476791 RYR1P21817 5038 aa2.37□□□□□ -2.03
SPTLC3-205ENST00000476791 HUWE1Q7Z6Z7 4374 aaKnown RBP2.37□□□□□ -2.03
SPTLC3-205ENST00000476791 KIAA1109Q2LD37 5005 aa2.35□□□□□ -2.03
SPTLC3-205ENST00000476791 DNAH17Q9UFH2 4485 aa2.35□□□□□ -2.03
SPTLC3-205ENST00000476791 M0QZ58 72 aa2.34□□□□□ -2.03
SPTLC3-205ENST00000476791 DEFB4AO15263 64 aa2.34□□□□□ -2.03
SPTLC3-205ENST00000476791 HTN3P15516 51 aa2.34□□□□□ -2.03
SPTLC3-205ENST00000476791 LRP1BQ9NZR2 4599 aa2.33□□□□□ -2.04
SPTLC3-205ENST00000476791 FAT2Q9NYQ8 4349 aa2.33□□□□□ -2.04
SPTLC3-205ENST00000476791 KMT2AQ03164 3969 aa2.31□□□□□ -2.04
SPTLC3-205ENST00000476791 ABCA13Q86UQ4 5058 aa2.31□□□□□ -2.04
SPTLC3-205ENST00000476791 STAB2Q8WWQ8 2551 aa2.3□□□□□ -2.04
SPTLC3-205ENST00000476791 LINC01556Q5JQF7 62 aa2.29□□□□□ -2.04
SPTLC3-205ENST00000476791 DNAH2Q9P225 4427 aa2.29□□□□□ -2.04
SPTLC3-205ENST00000476791 PKHD1P08F94 4074 aa2.27□□□□□ -2.05
SPTLC3-205ENST00000476791 STARD9Q9P2P6 4700 aa2.27□□□□□ -2.05
SPTLC3-205ENST00000476791 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
SPTLC3-205ENST00000476791 SPART-AS1P0CW21 52 aa2.26□□□□□ -2.05
SPTLC3-205ENST00000476791 HSPG2P98160 4391 aa2.25□□□□□ -2.05
SPTLC3-205ENST00000476791 VPS13BQ7Z7G8 4022 aa2.23□□□□□ -2.05
SPTLC3-205ENST00000476791 DEFB135Q30KP9 77 aa2.23□□□□□ -2.05
SPTLC3-205ENST00000476791 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
SPTLC3-205ENST00000476791 APOBP04114 4563 aaKnown RBP2.22□□□□□ -2.05
SPTLC3-205ENST00000476791 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
SPTLC3-205ENST00000476791 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
SPTLC3-205ENST00000476791 PKHD1L1Q86WI1 4243 aa2.21□□□□□ -2.06
SPTLC3-205ENST00000476791 UBR4Q5T4S7 5183 aa2.2□□□□□ -2.06
SPTLC3-205ENST00000476791 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
SPTLC3-205ENST00000476791 HERC1Q15751 4861 aa2.19□□□□□ -2.06
SPTLC3-205ENST00000476791 HMCN2Q8NDA2 5059 aa2.19□□□□□ -2.06
SPTLC3-205ENST00000476791 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
SPTLC3-205ENST00000476791 H3BNG1 76 aa2.17□□□□□ -2.06
SPTLC3-205ENST00000476791 PKD1P98161 4303 aa2.17□□□□□ -2.06
SPTLC3-205ENST00000476791 C9orf92A6NGG3 77 aa2.15□□□□□ -2.06
SPTLC3-205ENST00000476791 CRCT1Q9UGL9 99 aa2.15□□□□□ -2.06
SPTLC3-205ENST00000476791 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms