RNA–Protein interactions for RNA: ENST00000476556.5

RERE-212, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 1 (best) BASIC

Gene RERE, Length 4,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-212ENST00000476556 ANK2Q01484 3957 aa6.25□□□□□ -1.41
RERE-212ENST00000476556 DNAH5Q8TE73 4624 aa6.24□□□□□ -1.41
RERE-212ENST00000476556 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
RERE-212ENST00000476556 MT1HL1P0DM35 61 aa6.18□□□□□ -1.42
RERE-212ENST00000476556 LRP1BQ9NZR2 4599 aa6.17□□□□□ -1.42
RERE-212ENST00000476556 DNAH3Q8TD57 4116 aa6.15□□□□□ -1.42
RERE-212ENST00000476556 DNAH2Q9P225 4427 aa6.15□□□□□ -1.43
RERE-212ENST00000476556 LYSTQ99698 3801 aa6.13□□□□□ -1.43
RERE-212ENST00000476556 KMT2AQ03164 3969 aa6.11□□□□□ -1.43
RERE-212ENST00000476556 ALMS1Q8TCU4 4167 aa6.09□□□□□ -1.43
RERE-212ENST00000476556 FAT1Q14517 4588 aa6.08□□□□□ -1.44
RERE-212ENST00000476556 FRAS1Q86XX4 4008 aa6.07□□□□□ -1.44
RERE-212ENST00000476556 PRKDCP78527 4128 aaKnown RBP6.07□□□□□ -1.44
RERE-212ENST00000476556 DNHD1Q96M86 4753 aa6.06□□□□□ -1.44
RERE-212ENST00000476556 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
RERE-212ENST00000476556 CMYA5Q8N3K9 4069 aa6.02□□□□□ -1.45
RERE-212ENST00000476556 DYNC1H1Q14204 4646 aaKnown RBP6□□□□□ -1.45
RERE-212ENST00000476556 DNAH7Q8WXX0 4024 aa5.97□□□□□ -1.45
RERE-212ENST00000476556 VPS13BQ7Z7G8 4022 aa5.95□□□□□ -1.46
RERE-212ENST00000476556 LORP23490 312 aaPredicted RBP5.94□□□□□ -1.46
RERE-212ENST00000476556 DYNC2H1Q8NCM8 4307 aaKnown RBP5.94□□□□□ -1.46
RERE-212ENST00000476556 HECTD4Q9Y4D8 3996 aa5.93□□□□□ -1.46
RERE-212ENST00000476556 SACSQ9NZJ4 4579 aa5.92□□□□□ -1.46
RERE-212ENST00000476556 DNAH6Q9C0G6 4158 aa5.91□□□□□ -1.46
RERE-212ENST00000476556 KRTAP4-5Q9BYR2 181 aa5.89□□□□□ -1.47
RERE-212ENST00000476556 MYCBP2O75592 4640 aa5.84□□□□□ -1.47
RERE-212ENST00000476556 FAT2Q9NYQ8 4349 aa5.79□□□□□ -1.48
RERE-212ENST00000476556 PRO2289Q9P1D8 64 aa5.77□□□□□ -1.49
RERE-212ENST00000476556 APOBP04114 4563 aaKnown RBP5.75□□□□□ -1.49
RERE-212ENST00000476556 RYR1P21817 5038 aa5.69□□□□□ -1.5
RERE-212ENST00000476556 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
RERE-212ENST00000476556 KRTAP4-1Q9BYQ7 146 aa5.68□□□□□ -1.5
RERE-212ENST00000476556 HYDINQ4G0P3 5121 aa5.66□□□□□ -1.5
RERE-212ENST00000476556 KIAA1109Q2LD37 5005 aa5.6□□□□□ -1.51
RERE-212ENST00000476556 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
RERE-212ENST00000476556 PKHD1P08F94 4074 aa5.59□□□□□ -1.52
RERE-212ENST00000476556 FAT3Q8TDW7 4589 aa5.58□□□□□ -1.52
RERE-212ENST00000476556 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
RERE-212ENST00000476556 KRTAP17-1Q9BYP8 105 aa5.53□□□□□ -1.52
RERE-212ENST00000476556 KRTAP10-12P60413 245 aa5.52□□□□□ -1.53
RERE-212ENST00000476556 RYR3Q15413 4870 aa5.49□□□□□ -1.53
RERE-212ENST00000476556 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
RERE-212ENST00000476556 PKD1P98161 4303 aa5.46□□□□□ -1.53
RERE-212ENST00000476556 LRP2P98164 4655 aa5.46□□□□□ -1.54
RERE-212ENST00000476556 INE1O15225 51 aa5.45□□□□□ -1.54
RERE-212ENST00000476556 RYR2Q92736 4967 aa5.4□□□□□ -1.55
RERE-212ENST00000476556 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
RERE-212ENST00000476556 HSPG2P98160 4391 aa5.31□□□□□ -1.56
RERE-212ENST00000476556 KMT2CQ8NEZ4 4911 aaKnown RBP5.31□□□□□ -1.56
RERE-212ENST00000476556 PKHD1L1Q86WI1 4243 aa5.27□□□□□ -1.57
RERE-212ENST00000476556 MT1HP80294 61 aa5.26□□□□□ -1.57
RERE-212ENST00000476556 MT2AP02795 61 aa5.24□□□□□ -1.57
RERE-212ENST00000476556 LPAP08519 4548 aa5.22□□□□□ -1.57
RERE-212ENST00000476556 MT1FP04733 61 aa5.21□□□□□ -1.58
RERE-212ENST00000476556 TNXBP22105 4242 aa5.19□□□□□ -1.58
RERE-212ENST00000476556 KRTAP19-1Q8IUB9 90 aa5.16□□□□□ -1.58
RERE-212ENST00000476556 KRTAP8-1Q8IUC2 63 aa5.14□□□□□ -1.59
RERE-212ENST00000476556 HERC2O95714 4834 aa5.12□□□□□ -1.59
RERE-212ENST00000476556 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
RERE-212ENST00000476556 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
RERE-212ENST00000476556 KRTAP19-2Q3LHN2 52 aa5.01□□□□□ -1.61
RERE-212ENST00000476556 KRTAP19-5Q3LI72 72 aa4.98□□□□□ -1.61
RERE-212ENST00000476556 KRTAP19-8Q3LI54 63 aa4.97□□□□□ -1.61
RERE-212ENST00000476556 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
RERE-212ENST00000476556 LCE2CQ5TA81 110 aa4.95□□□□□ -1.62
RERE-212ENST00000476556 MT1XP80297 61 aa4.94□□□□□ -1.62
RERE-212ENST00000476556 MUC17Q685J3 4493 aa4.93□□□□□ -1.62
RERE-212ENST00000476556 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
RERE-212ENST00000476556 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
RERE-212ENST00000476556 MT1BP07438 61 aa4.9□□□□□ -1.63
RERE-212ENST00000476556 EPPK1P58107 5090 aaKnown RBP4.89□□□□□ -1.63
RERE-212ENST00000476556 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
RERE-212ENST00000476556 ABCA13Q86UQ4 5058 aa4.85□□□□□ -1.63
RERE-212ENST00000476556 FLGP20930 4061 aaPredicted RBP4.85□□□□□ -1.63
RERE-212ENST00000476556 HERC1Q15751 4861 aa4.84□□□□□ -1.63
RERE-212ENST00000476556 PCLOQ9Y6V0 5065 aa4.77□□□□□ -1.65
RERE-212ENST00000476556 BIRC6Q9NR09 4857 aa4.76□□□□□ -1.65
RERE-212ENST00000476556 MUC2Q02817 5179 aa4.72□□□□□ -1.65
RERE-212ENST00000476556 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
RERE-212ENST00000476556 KRTAP4-8A0A0G2JLE6 195 aa4.68□□□□□ -1.66
RERE-212ENST00000476556 KRTAP4-8Q9BYQ9 185 aa4.68□□□□□ -1.66
RERE-212ENST00000476556 FAT4Q6V0I7 4981 aa4.61□□□□□ -1.67
RERE-212ENST00000476556 HMCN2Q8NDA2 5059 aa4.6□□□□□ -1.67
RERE-212ENST00000476556 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
RERE-212ENST00000476556 UBR4Q5T4S7 5183 aa4.56□□□□□ -1.68
RERE-212ENST00000476556 RNF213Q63HN8 5207 aa4.53□□□□□ -1.68
RERE-212ENST00000476556 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
RERE-212ENST00000476556 LCE2BO14633 110 aa4.52□□□□□ -1.69
RERE-212ENST00000476556 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
RERE-212ENST00000476556 MT1GP13640 62 aa4.45□□□□□ -1.7
RERE-212ENST00000476556 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
RERE-212ENST00000476556 MT1LQ93083 61 aa4.39□□□□□ -1.71
RERE-212ENST00000476556 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
RERE-212ENST00000476556 MT1EP04732 61 aa4.34□□□□□ -1.71
RERE-212ENST00000476556 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
RERE-212ENST00000476556 FSIP2Q5CZC0 6907 aa4.27□□□□□ -1.73
RERE-212ENST00000476556 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
RERE-212ENST00000476556 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
RERE-212ENST00000476556 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
RERE-212ENST00000476556 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms