RNA–Protein interactions for RNA: ENST00000474550.5

NPAS2-208, Transcript of neuronal PAS domain protein 2, humanhuman

TSL 1 (best)

Gene NPAS2, Length 7,983 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2-208ENST00000474550 DNAH1Q9P2D7 4330 aa4.76□□□□□ -1.65
NPAS2-208ENST00000474550 VPS13DQ5THJ4 4388 aa4.71□□□□□ -1.66
NPAS2-208ENST00000474550 DYNC2H1Q8NCM8 4307 aaKnown RBP4.7□□□□□ -1.66
NPAS2-208ENST00000474550 DNAH17Q9UFH2 4485 aa4.69□□□□□ -1.66
NPAS2-208ENST00000474550 CMYA5Q8N3K9 4069 aa4.68□□□□□ -1.66
NPAS2-208ENST00000474550 COL7A1Q02388 2944 aa4.67□□□□□ -1.66
NPAS2-208ENST00000474550 ANK2Q01484 3957 aa4.67□□□□□ -1.66
NPAS2-208ENST00000474550 HECTD4Q9Y4D8 3996 aa4.66□□□□□ -1.66
NPAS2-208ENST00000474550 DNAH10Q8IVF4 4471 aa4.64□□□□□ -1.67
NPAS2-208ENST00000474550 DNAH2Q9P225 4427 aa4.62□□□□□ -1.67
NPAS2-208ENST00000474550 DNAH7Q8WXX0 4024 aa4.61□□□□□ -1.67
NPAS2-208ENST00000474550 DNAH11Q96DT5 4516 aa4.6□□□□□ -1.67
NPAS2-208ENST00000474550 PLECQ15149 4684 aaKnown RBP4.58□□□□□ -1.68
NPAS2-208ENST00000474550 CSMD3Q7Z407 3707 aa4.55□□□□□ -1.68
NPAS2-208ENST00000474550 DNAH8Q96JB1 4490 aa4.54□□□□□ -1.68
NPAS2-208ENST00000474550 VPS13BQ7Z7G8 4022 aa4.49□□□□□ -1.69
NPAS2-208ENST00000474550 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
NPAS2-208ENST00000474550 KMT2AQ03164 3969 aa4.45□□□□□ -1.7
NPAS2-208ENST00000474550 LYSTQ99698 3801 aa4.44□□□□□ -1.7
NPAS2-208ENST00000474550 STARD9Q9P2P6 4700 aa4.43□□□□□ -1.7
NPAS2-208ENST00000474550 FRAS1Q86XX4 4008 aa4.43□□□□□ -1.7
NPAS2-208ENST00000474550 FAT2Q9NYQ8 4349 aa4.43□□□□□ -1.7
NPAS2-208ENST00000474550 PRKDCP78527 4128 aaKnown RBP4.41□□□□□ -1.7
NPAS2-208ENST00000474550 DNAH5Q8TE73 4624 aa4.41□□□□□ -1.7
NPAS2-208ENST00000474550 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
NPAS2-208ENST00000474550 LORP23490 312 aaPredicted RBP4.34□□□□□ -1.71
NPAS2-208ENST00000474550 SACSQ9NZJ4 4579 aa4.34□□□□□ -1.72
NPAS2-208ENST00000474550 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
NPAS2-208ENST00000474550 DYNC1H1Q14204 4646 aaKnown RBP4.32□□□□□ -1.72
NPAS2-208ENST00000474550 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
NPAS2-208ENST00000474550 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
NPAS2-208ENST00000474550 LRP1BQ9NZR2 4599 aa4.28□□□□□ -1.72
NPAS2-208ENST00000474550 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
NPAS2-208ENST00000474550 KRTAP4-5Q9BYR2 181 aa4.21□□□□□ -1.74
NPAS2-208ENST00000474550 PKHD1L1Q86WI1 4243 aa4.19□□□□□ -1.74
NPAS2-208ENST00000474550 KRTAP4-1Q9BYQ7 146 aa4.16□□□□□ -1.74
NPAS2-208ENST00000474550 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.75
NPAS2-208ENST00000474550 APOBP04114 4563 aaKnown RBP4.14□□□□□ -1.75
NPAS2-208ENST00000474550 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
NPAS2-208ENST00000474550 PKHD1P08F94 4074 aa4.13□□□□□ -1.75
NPAS2-208ENST00000474550 FAT1Q14517 4588 aa4.11□□□□□ -1.75
NPAS2-208ENST00000474550 PKD1P98161 4303 aa4.09□□□□□ -1.75
NPAS2-208ENST00000474550 MT1HP80294 61 aa4.07□□□□□ -1.76
NPAS2-208ENST00000474550 MT2AP02795 61 aa4.04□□□□□ -1.76
NPAS2-208ENST00000474550 KRTAP19-8Q3LI54 63 aa4.03□□□□□ -1.76
NPAS2-208ENST00000474550 TNXBP22105 4242 aa4.03□□□□□ -1.76
NPAS2-208ENST00000474550 FAT3Q8TDW7 4589 aa4□□□□□ -1.77
NPAS2-208ENST00000474550 KRTAP10-5P60370 271 aa4□□□□□ -1.77
NPAS2-208ENST00000474550 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
NPAS2-208ENST00000474550 MYCBP2O75592 4640 aa3.95□□□□□ -1.78
NPAS2-208ENST00000474550 HSPG2P98160 4391 aa3.95□□□□□ -1.78
NPAS2-208ENST00000474550 MT1FP04733 61 aa3.94□□□□□ -1.78
NPAS2-208ENST00000474550 KRTAP19-1Q8IUB9 90 aa3.93□□□□□ -1.78
NPAS2-208ENST00000474550 LRP1Q07954 4544 aaKnown RBP3.92□□□□□ -1.78
NPAS2-208ENST00000474550 FLGP20930 4061 aaPredicted RBP3.9□□□□□ -1.79
NPAS2-208ENST00000474550 DNHD1Q96M86 4753 aa3.88□□□□□ -1.79
NPAS2-208ENST00000474550 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
NPAS2-208ENST00000474550 RYR2Q92736 4967 aa3.85□□□□□ -1.79
NPAS2-208ENST00000474550 MT1XP80297 61 aa3.81□□□□□ -1.8
NPAS2-208ENST00000474550 KRTAP19-2Q3LHN2 52 aa3.77□□□□□ -1.81
NPAS2-208ENST00000474550 KRTAP17-1Q9BYP8 105 aa3.76□□□□□ -1.81
NPAS2-208ENST00000474550 RYR1P21817 5038 aa3.75□□□□□ -1.81
NPAS2-208ENST00000474550 MT1BP07438 61 aa3.74□□□□□ -1.81
NPAS2-208ENST00000474550 KRTAP9-8Q9BYQ0 159 aa3.74□□□□□ -1.81
NPAS2-208ENST00000474550 RYR3Q15413 4870 aa3.74□□□□□ -1.81
NPAS2-208ENST00000474550 MUC17Q685J3 4493 aa3.73□□□□□ -1.81
NPAS2-208ENST00000474550 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
NPAS2-208ENST00000474550 LCE2CQ5TA81 110 aa3.72□□□□□ -1.81
NPAS2-208ENST00000474550 HYDINQ4G0P3 5121 aa3.71□□□□□ -1.82
NPAS2-208ENST00000474550 KRTAP9-3Q9BYQ3 159 aa3.64□□□□□ -1.83
NPAS2-208ENST00000474550 LRP2P98164 4655 aa3.62□□□□□ -1.83
NPAS2-208ENST00000474550 HERC1Q15751 4861 aa3.56□□□□□ -1.84
NPAS2-208ENST00000474550 MT1GP13640 62 aa3.52□□□□□ -1.85
NPAS2-208ENST00000474550 MT1LQ93083 61 aa3.5□□□□□ -1.85
NPAS2-208ENST00000474550 KMT2CQ8NEZ4 4911 aaKnown RBP3.49□□□□□ -1.85
NPAS2-208ENST00000474550 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
NPAS2-208ENST00000474550 KIAA1109Q2LD37 5005 aa3.48□□□□□ -1.85
NPAS2-208ENST00000474550 LPAP08519 4548 aa3.47□□□□□ -1.85
NPAS2-208ENST00000474550 MT1EP04732 61 aa3.45□□□□□ -1.86
NPAS2-208ENST00000474550 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
NPAS2-208ENST00000474550 LCE3BQ5TA77 95 aa3.4□□□□□ -1.86
NPAS2-208ENST00000474550 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
NPAS2-208ENST00000474550 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
NPAS2-208ENST00000474550 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
NPAS2-208ENST00000474550 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
NPAS2-208ENST00000474550 BIRC6Q9NR09 4857 aa3.34□□□□□ -1.87
NPAS2-208ENST00000474550 KRTAP4-8A0A0G2JLE6 195 aa3.34□□□□□ -1.87
NPAS2-208ENST00000474550 KRTAP4-8Q9BYQ9 185 aa3.34□□□□□ -1.87
NPAS2-208ENST00000474550 LCE2BO14633 110 aa3.34□□□□□ -1.88
NPAS2-208ENST00000474550 HERC2O95714 4834 aa3.34□□□□□ -1.88
NPAS2-208ENST00000474550 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
NPAS2-208ENST00000474550 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
NPAS2-208ENST00000474550 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
NPAS2-208ENST00000474550 SPRR2EP22531 72 aa3.27□□□□□ -1.89
NPAS2-208ENST00000474550 SPRR2BP35325 72 aa3.27□□□□□ -1.89
NPAS2-208ENST00000474550 SPRR2AP35326 72 aa3.27□□□□□ -1.89
NPAS2-208ENST00000474550 MT1MQ8N339 61 aa3.24□□□□□ -1.89
NPAS2-208ENST00000474550 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
NPAS2-208ENST00000474550 SPRR2DP22532 72 aa3.17□□□□□ -1.9
NPAS2-208ENST00000474550 PCLOQ9Y6V0 5065 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms